Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g10264 Brassica carinata HOM05D010930 ORTHO05D012996 5.5e-56 220.7 110 100.0
C04p30970 Brassica napus HOM05D010930 ORTHO05D012996 5.5e-56 220.7 110 100.0
BolC4t24616H Brassica oleracea HOM05D010930 ORTHO05D012996 5.5e-56 220.7 110 100.0
A04p00840 Brassica napus HOM05D010930 ORTHO05D012996 2.6e-53 211.8 110 97.3
BraA04t15801Z Brassica rapa HOM05D010930 ORTHO05D012996 2.6e-53 211.8 110 97.3
BcaB02g08131 Brassica carinata HOM05D010930 ORTHO05D012996 3.6e-47 191.4 110 90.9
BcaC07g42620 Brassica carinata HOM05D010930 ORTHO05D012996 4.7e-39 164.5 112 79.5
Sp5g01420 Schrenkiella parvula HOM05D010930 ORTHO05D012996 1.2e-37 159.8 110 77.3
BcaC07g40688 Brassica carinata HOM05D010930 ORTHO05D012996 1.5e-37 159.5 112 76.8
C08p36860 Brassica napus HOM05D010930 ORTHO05D012996 1.5e-37 159.5 112 76.8
BolC8t51265H Brassica oleracea HOM05D010930 ORTHO05D012996 1.5e-37 159.5 112 76.8
A09p54000 Brassica napus HOM05D010930 ORTHO05D012996 3.7e-36 154.8 112 75.0
BraA09t40814Z Brassica rapa HOM05D010930 ORTHO05D012996 3.7e-36 154.8 112 75.0
AL5G44530 Arabidopsis lyrata HOM05D010930 ORTHO05D012996 6.2e-31 137.5 112 69.6
CARHR172290 Cardamine hirsuta HOM05D010930 ORTHO05D012996 6.8e-30 134.0 113 69.0
Carub.0005s2869 Capsella rubella HOM05D010930 ORTHO05D012996 1.5e-29 132.9 114 67.5
Thhalv10006380m.g Eutrema salsugineum HOM05D010930 ORTHO05D012996 9.9e-29 130.2 108 70.4
AT3G61930 Arabidopsis thaliana HOM05D010930 ORTHO05D012996 1.7e-28 129.4 112 67.0
THA.LOC104817614 Tarenaya hassleriana HOM05D010930 ORTHO05D012996 8.7e-09 63.9 111 45.9
Potri.002G179000 Populus trichocarpa HOM05D009241 ORTHO05D011050 2.1e-07 59.3 112 41.1
Atru.chr5.761 Acer truncatum HOM05D009241 ORTHO05D011050 2.8e-07 58.9 97 38.1
FAN10G2033 Fragaria x ananassa HOM05D009241 ORTHO05D011050 8.1e-07 57.4 110 33.6
QL08p047080 Quercus lobata HOM05D009241 ORTHO05D011050 1.8e-06 56.2 83 42.2
FvH4_7g17570 Fragaria vesca HOM05D009241 ORTHO05D011050 4.0e-06 55.1 110 33.6
FAN06G1774 Fragaria x ananassa HOM05D009241 ORTHO05D011050 4.0e-06 55.1 110 33.6
FAN06G2855 Fragaria x ananassa HOM05D009241 ORTHO05D011050 4.0e-06 55.1 110 33.6
Manes.01G240500 Manihot esculenta HOM05D009241 ORTHO05D011050 6.9e-06 54.3 112 37.5


User provided reference genes

Program Settings