Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g10184 Brassica carinata HOM05D038341 ORTHO05D032348 1.9e-98 362.5 177 100.0
C04p31820 Brassica napus HOM05D038341 ORTHO05D032348 2.5e-10 69.7 108 45.4
BolC4t24730H Brassica oleracea HOM05D038341 ORTHO05D032348 2.2e-09 66.6 108 43.5
BcaB04g21038 Brassica carinata HOM05D004000 ORTHO05D004629 7.7e-07 58.2 61 55.7
BcaC05g29239 Brassica carinata HOM05D004000 ORTHO05D004629 7.7e-07 58.2 70 55.7
C05p55150 Brassica napus HOM05D004000 ORTHO05D004629 7.7e-07 58.2 70 55.7
BolC5t34183H Brassica oleracea HOM05D004000 ORTHO05D004629 7.7e-07 58.2 70 55.7
BraA05t22474Z Brassica rapa HOM05D004000 ORTHO05D004629 7.7e-07 58.2 70 55.7
BcaC09g48261 Brassica carinata HOM05D004000 ORTHO05D004629 1.0e-06 57.8 49 67.3
Thhalv10021347m.g Eutrema salsugineum HOM05D004000 ORTHO05D004629 1.3e-06 57.4 61 54.1
A05p36700 Brassica napus HOM05D004000 ORTHO05D004629 2.9e-06 56.2 70 54.3
BcaB06g25514 Brassica carinata HOM05D004000 ORTHO05D004629 5.0e-06 55.5 70 54.3
Sp3g10920 Schrenkiella parvula HOM05D004000 ORTHO05D004629 5.0e-06 55.5 70 54.3
BcaB04g18717 Brassica carinata HOM05D001323 ORTHO05D001223 6.5e-06 55.1 61 54.1
BcaC01g04031 Brassica carinata HOM05D001323 ORTHO05D001223 6.5e-06 55.1 67 52.2
A01p40750 Brassica napus HOM05D004000 ORTHO05D004629 6.5e-06 55.1 49 65.3
BraA01t04109Z Brassica rapa HOM05D004000 ORTHO05D004629 6.5e-06 55.1 49 65.3
CARHR087290 Cardamine hirsuta HOM05D004000 ORTHO05D004629 6.5e-06 55.1 49 63.3
BolC3t16860H Brassica oleracea HOM05D001323 ORTHO05D001223 8.5e-06 54.7 67 52.2
BraA03t12933Z Brassica rapa HOM05D001323 ORTHO05D001223 8.5e-06 54.7 67 52.2


User provided reference genes

Program Settings