Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g10109 Brassica carinata HOM05D021133 ORTHO05D024346 4.6e-123 444.5 216 100.0
C04p32640 Brassica napus HOM05D021133 ORTHO05D024346 3.4e-118 428.3 209 99.5
BolC4t24832H Brassica oleracea HOM05D021133 ORTHO05D024346 3.4e-118 428.3 209 99.5
BolC3t17027H Brassica oleracea HOM05D021133 ORTHO05D024346 9.0e-26 121.3 66 92.4
Thhalv10008002m.g Eutrema salsugineum HOM05D000194 ORTHO05D000069 2.7e-22 109.8 82 68.3
Sp1g08750 Schrenkiella parvula HOM05D000194 ORTHO05D000069 6.7e-21 105.1 73 72.6
CARHR010220 Cardamine hirsuta HOM05D000194 ORTHO05D000069 4.8e-19 99.0 76 72.4
Carub.0001s0953 Capsella rubella HOM05D000194 ORTHO05D000069 1.4e-18 97.4 84 65.5
A06p06760 Brassica napus HOM05D000194 ORTHO05D000069 1.4e-15 87.4 73 65.8
AL1G20810 Arabidopsis lyrata HOM05D000194 ORTHO05D000069 1.2e-14 84.3 84 59.5
AT1G10120 Arabidopsis thaliana HOM05D000194 ORTHO05D000069 1.2e-14 84.3 84 59.5
CARHR009030 Cardamine hirsuta HOM05D021133 ORTHO05D024346 2.3e-13 80.1 63 71.4
BcaC05g24811 Brassica carinata HOM05D000194 ORTHO05D000069 3.9e-13 79.3 73 61.6
C05p08250 Brassica napus HOM05D000194 ORTHO05D000069 3.9e-13 79.3 73 61.6
BolC5t29576H Brassica oleracea HOM05D000194 ORTHO05D000069 3.9e-13 79.3 73 61.6
BraA06t23890Z Brassica rapa HOM05D000194 ORTHO05D000069 1.1e-12 77.8 73 60.3
Aa31LG2G10680 Aethionema arabicum HOM05D000194 ORTHO05D000069 1.9e-12 77.0 76 57.9
C08p13410 Brassica napus HOM05D000194 ORTHO05D000069 8.2e-11 71.6 71 62.0
BolC8t48971H Brassica oleracea HOM05D000194 ORTHO05D000069 8.2e-11 71.6 71 62.0
A08p34180 Brassica napus HOM05D000194 ORTHO05D000069 3.1e-10 69.7 71 60.6
BraA08t35330Z Brassica rapa HOM05D000194 ORTHO05D000069 3.1e-10 69.7 82 56.1
THA.LOC104819959 Tarenaya hassleriana HOM05D000194 ORTHO05D000069 5.3e-10 68.9 76 53.9
C08p49140 Brassica napus HOM05D000194 ORTHO05D000069 6.9e-10 68.6 65 60.0
BolC8t52448H Brassica oleracea HOM05D000194 ORTHO05D000069 6.9e-10 68.6 65 60.0
BcaC07g41842 Brassica carinata HOM05D000194 ORTHO05D000069 9.0e-10 68.2 65 60.0
THA.LOC104823682 Tarenaya hassleriana HOM05D000194 ORTHO05D000069 8.5e-08 61.6 73 49.3
BcaC05g27226 Brassica carinata HOM05D000250 ORTHO05D027788 1.1e-07 61.2 85 45.9
BraA09t41863Z Brassica rapa HOM05D000194 ORTHO05D000069 1.9e-07 60.5 73 50.7


User provided reference genes

Program Settings