Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g10072 Brassica carinata HOM05D004489 ORTHO05D090663 4.6e-121 438.3 301 100.0
BcaC04g20631 Brassica carinata HOM05D004489 ORTHO05D010056 2.2e-78 296.6 344 70.3
C09p41300 Brassica napus HOM05D004489 ORTHO05D010056 3.6e-73 279.3 249 74.7
BcaC05g29022 Brassica carinata HOM05D004489 ORTHO05D010056 2.8e-70 269.6 333 67.6
BolC7t40773H Brassica oleracea HOM05D004489 ORTHO05D010056 7.0e-69 265.0 249 70.7
C07p03810 Brassica napus HOM05D004489 ORTHO05D010056 1.2e-68 264.2 249 69.5
C07p01860 Brassica napus HOM05D004489 ORTHO05D010056 5.0e-67 258.8 249 66.3
BcaC04g22095 Brassica carinata HOM05D004489 ORTHO05D000493 1.9e-66 256.9 332 67.8
BolC9t55268H Brassica oleracea HOM05D004489 ORTHO05D010056 2.8e-65 253.1 249 69.9
BcaC03g16680 Brassica carinata HOM05D004489 ORTHO05D010056 4.7e-65 252.3 250 62.8
C05p52380 Brassica napus HOM05D004489 ORTHO05D010056 4.7e-65 252.3 249 65.9
BcaC07g38382 Brassica carinata HOM05D004489 ORTHO05D010056 1.0e-64 251.1 341 57.8
BolC2t08562H Brassica oleracea HOM05D004489 ORTHO05D010056 1.0e-64 251.1 249 69.1
C09p20870 Brassica napus HOM05D004489 ORTHO05D010056 4.9e-62 242.3 230 62.2
BolC9t54984H Brassica oleracea HOM05D004489 ORTHO05D010056 4.9e-62 242.3 230 62.2
BcaC08g45661 Brassica carinata HOM05D004489 ORTHO05D010056 2.0e-60 236.9 248 57.7
C02p24700 Brassica napus HOM05D004489 ORTHO05D098125 9.5e-58 228.0 226 69.9
BcaC05g28262 Brassica carinata HOM05D004489 ORTHO05D010056 1.2e-57 227.6 222 68.5
BolC7t42863H Brassica oleracea HOM05D004489 ORTHO05D010056 1.3e-54 217.6 230 66.1
C07p23290 Brassica napus HOM05D004489 ORTHO05D010056 2.7e-52 209.9 249 55.0
C01p35260 Brassica napus HOM05D004489 ORTHO05D010056 7.8e-52 208.4 256 55.5
BolC1t03483H Brassica oleracea HOM05D004489 ORTHO05D010056 7.8e-52 208.4 256 57.4
BcaC07g37389 Brassica carinata HOM05D004489 ORTHO05D010056 3.9e-51 206.1 336 47.9
C08p08580 Brassica napus HOM05D004489 ORTHO05D010056 3.9e-51 206.1 254 57.1
BcaC01g00378 Brassica carinata HOM05D004489 ORTHO05D010056 5.1e-51 205.7 203 69.5
BcaC09g51560 Brassica carinata HOM05D004489 ORTHO05D010056 8.6e-51 204.9 217 57.1
C03p64090 Brassica napus HOM05D004489 ORTHO05D010056 4.3e-50 202.6 250 61.6
BolC8t47699H Brassica oleracea HOM05D004489 ORTHO05D010056 3.6e-49 199.5 254 55.9
BcaC07g37478 Brassica carinata HOM05D004489 ORTHO05D010056 1.4e-48 197.6 243 70.0
BcaC02g11524 Brassica carinata HOM05D004489 ORTHO05D010056 1.8e-48 197.2 295 47.5
A06p23470 Brassica napus HOM05D004489 ORTHO05D010056 1.8e-48 197.2 252 52.0
C02p47420 Brassica napus HOM05D004489 ORTHO05D010056 1.8e-48 197.2 209 63.2
C09p34080 Brassica napus HOM05D004489 ORTHO05D010056 1.8e-48 197.2 256 59.8
BolC3t18663H Brassica oleracea HOM05D004489 ORTHO05D010056 4.0e-48 196.1 250 60.0
BolC9t56245H Brassica oleracea HOM05D004489 ORTHO05D010056 1.2e-47 194.5 256 59.4
BcaC09g51020 Brassica carinata HOM05D004489 ORTHO05D010056 2.6e-47 193.4 152 73.0
BcaC03g14954 Brassica carinata HOM05D004489 ORTHO05D010056 3.4e-47 193.0 208 66.8
BcaNung03342 Brassica carinata HOM05D004489 ORTHO05D010056 8.3e-46 188.3 202 58.4
BcaC04g20751 Brassica carinata HOM05D004489 ORTHO05D010056 4.1e-45 186.0 234 53.8
BcaC03g15256 Brassica carinata HOM05D004489 ORTHO05D010056 4.6e-44 182.6 149 70.5
BcaC04g22309 Brassica carinata HOM05D004489 ORTHO05D010056 1.3e-43 181.0 145 69.0
C08p18050 Brassica napus HOM05D004489 ORTHO05D021897 1.7e-43 180.6 316 57.3
BolC1t01193H Brassica oleracea HOM05D004489 ORTHO05D010056 1.7e-43 180.6 188 76.6
BolC8t49437H Brassica oleracea HOM05D004489 ORTHO05D021897 1.7e-43 180.6 316 56.3
C06p10210 Brassica napus HOM05D004489 ORTHO05D010056 3.0e-43 179.9 219 55.3
BcaC01g01829 Brassica carinata HOM05D004489 ORTHO05D010056 2.5e-42 176.8 171 62.0
C09p39590 Brassica napus HOM05D004489 ORTHO05D010056 5.6e-42 175.6 315 52.1
BcaC06g36646 Brassica carinata HOM05D004489 ORTHO05D010056 2.4e-40 170.2 129 72.9
C01p35220 Brassica napus HOM05D004489 ORTHO05D010056 4.0e-40 169.5 217 60.8
BolC5t31966H Brassica oleracea HOM05D004489 ORTHO05D018788 8.9e-40 168.3 304 42.4
BolC8t47151H Brassica oleracea HOM05D004489 ORTHO05D010056 1.1e-37 161.4 314 50.6
BcaC06g36060 Brassica carinata HOM05D004489 ORTHO05D092528 1.9e-37 160.6 190 55.3
C07p20720 Brassica napus HOM05D004489 ORTHO05D010056 4.2e-37 159.5 173 59.5
BcaC02g07770 Brassica carinata HOM05D004489 ORTHO05D010056 2.1e-36 157.1 187 54.0
BolC9t58376H Brassica oleracea HOM05D004489 ORTHO05D018788 3.9e-35 152.9 319 42.9
C06p25970 Brassica napus HOM05D004489 ORTHO05D021897 6.6e-35 152.1 322 57.5
BcaC04g18700 Brassica carinata HOM05D004489 ORTHO05D010056 1.1e-34 151.4 260 44.2
C02p21030 Brassica napus HOM05D004489 ORTHO05D010056 1.4e-32 144.4 220 55.9
BcaC07g38503 Brassica carinata HOM05D004489 ORTHO05D010056 1.2e-31 141.4 142 59.9
C05p26780 Brassica napus HOM05D004489 ORTHO05D010056 1.2e-31 141.4 196 59.2
C05p22010 Brassica napus HOM05D004489 ORTHO05D010056 9.9e-31 138.3 163 62.0
C07p01280 Brassica napus HOM05D004489 ORTHO05D098218 9.9e-31 138.3 304 54.6
C08p11390 Brassica napus HOM05D004489 ORTHO05D010056 1.7e-30 137.5 143 55.9
BraA07t28336Z Brassica rapa HOM05D004489 ORTHO05D018788 1.4e-29 134.4 281 39.5
C01p50400 Brassica napus HOM05D004489 ORTHO05D010056 1.9e-29 134.0 143 62.2
A05p21690 Brassica napus HOM05D004489 ORTHO05D100974 2.4e-29 133.7 177 53.1
BraA06t25443Z Brassica rapa HOM05D004489 ORTHO05D010056 7.1e-29 132.1 158 62.7
BcaC04g22798 Brassica carinata HOM05D004489 ORTHO05D010056 9.3e-29 131.7 205 47.8
BcaC04g20961 Brassica carinata HOM05D004489 ORTHO05D032456 3.5e-28 129.8 144 56.2
BcaB08g35381 Brassica carinata HOM05D004489 ORTHO05D091739 4.6e-28 129.4 328 37.2
C09p37510 Brassica napus HOM05D004489 ORTHO05D032456 6.0e-28 129.0 158 54.4
BolC9t56581H Brassica oleracea HOM05D004489 ORTHO05D032456 6.0e-28 129.0 158 54.4
BolC6t37769H Brassica oleracea HOM05D004489 ORTHO05D010056 1.0e-27 128.3 143 65.7
C02p57490 Brassica napus HOM05D004489 ORTHO05D010056 1.3e-27 127.9 217 53.9
BcaB06g26545 Brassica carinata HOM05D004489 ORTHO05D095075 3.0e-27 126.7 205 47.3
C01p27340 Brassica napus HOM05D004489 ORTHO05D010056 3.9e-27 126.3 143 52.4
BolC5t30898H Brassica oleracea HOM05D004489 ORTHO05D010056 3.9e-27 126.3 163 60.7
BolC2t08244H Brassica oleracea HOM05D004489 ORTHO05D010056 5.1e-27 125.9 141 67.4
C01p30160 Brassica napus HOM05D004489 ORTHO05D010056 8.7e-27 125.2 235 47.2
A01p28040 Brassica napus HOM05D004489 ORTHO05D018788 1.1e-26 124.8 281 37.4
BolC4t27228H Brassica oleracea HOM05D004489 ORTHO05D018788 1.1e-26 124.8 274 39.4
BcaC08g44976 Brassica carinata HOM05D004489 ORTHO05D010056 2.5e-26 123.6 215 62.3
BraA05t20820Z Brassica rapa HOM05D004489 ORTHO05D027759 2.8e-25 120.2 115 64.3
BcaB02g10531 Brassica carinata HOM05D004489 ORTHO05D094500 4.8e-25 119.4 162 53.7
A05p19170 Brassica napus HOM05D004489 ORTHO05D027759 1.2e-23 114.8 115 61.7
BcaC05g26196 Brassica carinata HOM05D004489 ORTHO05D010056 2.6e-23 113.6 121 56.2
BcaC09g48389 Brassica carinata HOM05D004489 ORTHO05D010056 3.4e-23 113.2 117 59.8
BcaC03g16777 Brassica carinata HOM05D004489 ORTHO05D027759 2.2e-22 110.5 78 76.9
BolC2t10703H Brassica oleracea HOM05D004489 ORTHO05D027759 2.2e-22 110.5 78 76.9
BcaB06g27095 Brassica carinata HOM05D004489 ORTHO05D095035 3.8e-22 109.8 245 49.0
BcaC05g26627 Brassica carinata HOM05D004489 ORTHO05D010056 4.9e-22 109.4 83 74.7
BcaB04g17396 Brassica carinata HOM05D004489 ORTHO05D095687 1.4e-21 107.8 181 44.8
C07p01670 Brassica napus HOM05D008277 ORTHO05D018788 1.9e-21 107.5 174 46.0
C09p55140 Brassica napus HOM05D004489 ORTHO05D010056 1.9e-21 107.5 133 65.4
BcaB01g01214 Brassica carinata HOM05D004489 ORTHO05D000740 2.4e-21 107.1 238 42.0
BcaB07g33397 Brassica carinata HOM05D004489 ORTHO05D000740 3.2e-21 106.7 238 42.4
C07p01700 Brassica napus HOM05D004489 ORTHO05D010056 5.4e-21 105.9 169 53.3
BolC7t42604H Brassica oleracea HOM05D004489 ORTHO05D010056 7.1e-21 105.5 228 45.6
BraA02t07746Z Brassica rapa HOM05D004489 ORTHO05D018788 7.1e-21 105.5 264 35.6
BcaC04g21271 Brassica carinata HOM05D004489 ORTHO05D039740 1.8e-19 100.9 181 43.6
BcaC08g44969 Brassica carinata HOM05D004489 ORTHO05D010056 1.8e-19 100.9 128 47.7
BraA04t16648Z Brassica rapa HOM05D004489 ORTHO05D018788 5.1e-19 99.4 283 34.6
BcaC04g19493 Brassica carinata HOM05D004489 ORTHO05D010056 1.1e-18 98.2 145 47.6
BcaC03g17739 Brassica carinata HOM05D004489 ORTHO05D010056 3.3e-18 96.7 95 57.9
BraA07t28964Z Brassica rapa HOM05D004489 ORTHO05D010056 5.6e-18 95.9 235 46.8
A07p11790 Brassica napus HOM05D004489 ORTHO05D010056 9.6e-18 95.1 212 47.6
A04p09860 Brassica napus HOM05D004489 ORTHO05D010056 1.3e-17 94.7 125 55.2
BcaB05g23045 Brassica carinata HOM05D008277 ORTHO05D093753 3.7e-17 93.2 168 47.0
BcaB04g17769 Brassica carinata HOM05D004489 ORTHO05D096269 8.1e-17 92.0 137 49.6
BcaB05g24918 Brassica carinata HOM05D004489 ORTHO05D092070 1.1e-16 91.7 154 44.8
BraA09t38666Z Brassica rapa HOM05D004489 ORTHO05D010056 1.8e-16 90.9 97 53.6
BcaB01g01689 Brassica carinata HOM05D004489 ORTHO05D095684 2.4e-16 90.5 134 48.5
BcaB03g16455 Brassica carinata HOM05D004489 ORTHO05D005643 5.3e-16 89.4 209 41.6
BcaB07g33270 Brassica carinata HOM05D000888 ORTHO05D000740 1.2e-15 88.2 166 44.6
BcaB03g16167 Brassica carinata HOM05D004489 ORTHO05D091635 2.0e-15 87.4 210 40.5
A05p21970 Brassica napus HOM05D010967 ORTHO05D028117 7.6e-15 85.5 129 50.4
BcaB08g35162 Brassica carinata HOM05D000888 ORTHO05D000740 2.2e-14 84.0 149 45.0
BolC3t17100H Brassica oleracea HOM05D004489 ORTHO05D042334 6.4e-14 82.4 139 70.5
BolC6t37761H Brassica oleracea HOM05D004489 ORTHO05D104721 6.4e-14 82.4 130 45.4
BraA01t03541Z Brassica rapa HOM05D010967 ORTHO05D028117 8.4e-14 82.0 106 56.6
BraA05t21099Z Brassica rapa HOM05D004489 ORTHO05D027587 1.1e-13 81.6 138 44.2
BcaNung05365 Brassica carinata HOM05D004489 ORTHO05D094850 1.9e-13 80.9 53 79.2
BraA09t38594Z Brassica rapa HOM05D010967 ORTHO05D028117 2.5e-13 80.5 110 55.5
BolC9t55309H Brassica oleracea HOM05D004489 ORTHO05D027587 4.2e-13 79.7 144 44.4
A03p48290 Brassica napus HOM05D010967 ORTHO05D028117 5.5e-13 79.3 105 55.2
BcaB02g11425 Brassica carinata HOM05D000888 ORTHO05D000740 9.3e-13 78.6 227 38.3
A04p09850 Brassica napus HOM05D004489 ORTHO05D042334 2.1e-12 77.4 141 68.1
BcaB03g16158 Brassica carinata HOM05D004489 ORTHO05D091594 3.5e-12 76.6 89 56.2
BcaC04g22067 Brassica carinata HOM05D004489 ORTHO05D027587 3.5e-12 76.6 107 52.3
BcaB03g16202 Brassica carinata HOM05D004489 ORTHO05D093905 4.6e-12 76.3 113 50.4
BraA05t21163Z Brassica rapa HOM05D010967 ORTHO05D108496 1.3e-11 74.7 71 66.2
BcaB04g17006 Brassica carinata HOM05D004489 ORTHO05D092589 3.0e-11 73.6 152 42.8
A05p23080 Brassica napus HOM05D010967 ORTHO05D017683 5.1e-11 72.8 70 65.7
BraA01t02558Z Brassica rapa HOM05D010967 ORTHO05D108345 5.1e-11 72.8 99 54.5
A01p19980 Brassica napus HOM05D010967 ORTHO05D017683 1.5e-10 71.2 70 64.3
A09p35600 Brassica napus HOM05D010967 ORTHO05D017683 1.5e-10 71.2 70 64.3
BraA01t02827Z Brassica rapa HOM05D010967 ORTHO05D017683 1.5e-10 71.2 70 64.3
A01p27750 Brassica napus HOM05D004489 ORTHO05D000199 3.3e-10 70.1 104 44.2
A01p34440 Brassica napus HOM05D010967 ORTHO05D017683 3.3e-10 70.1 70 64.3
A05p17100 Brassica napus HOM05D010967 ORTHO05D017683 3.3e-10 70.1 70 64.3
A09p48280 Brassica napus HOM05D010967 ORTHO05D017683 3.3e-10 70.1 70 64.3
BraA02t08312Z Brassica rapa HOM05D010967 ORTHO05D108770 3.3e-10 70.1 70 64.3
BcaB08g35275 Brassica carinata HOM05D004489 ORTHO05D093088 7.4e-10 68.9 119 45.4
A05p21780 Brassica napus HOM05D004489 ORTHO05D027587 1.3e-09 68.2 91 50.5
BraA07t28506Z Brassica rapa HOM05D010967 ORTHO05D108156 2.1e-09 67.4 71 63.4
A06p28060 Brassica napus HOM05D010967 ORTHO05D017683 2.8e-09 67.0 66 63.6
A03p58810 Brassica napus HOM05D010967 ORTHO05D017683 1.8e-08 64.3 65 61.5
BcaC06g35012 Brassica carinata HOM05D004489 ORTHO05D021897 9.0e-08 62.0 149 32.9
BcaC01g03828 Brassica carinata HOM05D004489 ORTHO05D010056 1.0e-06 58.5 70 50.0
C06p26040 Brassica napus HOM05D004489 ORTHO05D010056 1.3e-06 58.2 165 43.0
BcaB02g06508 Brassica carinata HOM05D004489 ORTHO05D094292 2.9e-06 57.0 193 33.7
C07p19330 Brassica napus HOM05D004489 ORTHO05D021897 3.8e-06 56.6 37 73.0


User provided reference genes

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