Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g09945 Brassica carinata HOM05D000200 ORTHO05D096078 7.9e-83 310.5 163 100.0
BcaC02g09993 Brassica carinata HOM05D000200 ORTHO05D000262 2.3e-18 96.3 65 86.2
C04p34240 Brassica napus HOM05D000200 ORTHO05D000262 2.3e-18 96.3 65 86.2
BolC4t24982H Brassica oleracea HOM05D000200 ORTHO05D000262 2.3e-18 96.3 65 86.2
A04p02700 Brassica napus HOM05D000200 ORTHO05D000262 4.0e-18 95.5 65 86.2
BraA04t15996Z Brassica rapa HOM05D000200 ORTHO05D000262 4.0e-18 95.5 65 86.2
BcaB02g08274 Brassica carinata HOM05D000200 ORTHO05D000262 7.5e-17 91.3 65 86.2
Carub.0005s2501 Capsella rubella HOM05D000200 ORTHO05D000262 2.4e-15 86.3 57 82.5
Aa31LG10G12880 Aethionema arabicum HOM05D000200 ORTHO05D000262 8.0e-11 71.2 49 81.6
AL5G39850 Arabidopsis lyrata HOM05D000200 ORTHO05D000262 1.5e-09 67.0 46 80.4
AT3G58160 Arabidopsis thaliana HOM05D000200 ORTHO05D000262 1.5e-09 67.0 46 80.4
THA.LOC104802247 Tarenaya hassleriana HOM05D000200 ORTHO05D000262 1.5e-09 67.0 46 80.4
Sp5g04560 Schrenkiella parvula HOM05D000200 ORTHO05D000262 2.0e-09 66.6 46 87.0
Duzib138G1862 Durio zibethinus HOM05D000200 ORTHO05D000262 2.6e-09 66.2 66 62.1
Thhalv10006411m.g Eutrema salsugineum HOM05D000200 ORTHO05D000262 3.4e-09 65.9 46 84.8
BcaB02g07546 Brassica carinata HOM05D000200 ORTHO05D000262 5.8e-09 65.1 46 82.6
BcaC08g44902 Brassica carinata HOM05D000200 ORTHO05D000262 9.8e-09 64.3 46 82.6
C06p25220 Brassica napus HOM05D000200 ORTHO05D000262 9.8e-09 64.3 46 82.6
BolC6t37681H Brassica oleracea HOM05D000200 ORTHO05D000262 9.8e-09 64.3 46 82.6
Thecc.01G263100 Theobroma cacao HOM05D000200 ORTHO05D000262 9.8e-09 64.3 61 63.9
A07p23950 Brassica napus HOM05D000200 ORTHO05D000262 2.9e-08 62.8 46 80.4
CARHR168530 Cardamine hirsuta HOM05D000200 ORTHO05D000262 3.7e-08 62.4 60 70.0
BraA07t30046Z Brassica rapa HOM05D000200 ORTHO05D000262 8.3e-08 61.2 46 78.3


User provided reference genes

Program Settings