Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g09920 Brassica carinata HOM05D001224 ORTHO05D014478 2.2e-255 885.2 454 100.0
BcaC08g43834 Brassica carinata HOM05D001224 ORTHO05D014478 2.2e-183 646.0 553 67.5
BcaC06g36171 Brassica carinata HOM05D001224 ORTHO05D014478 6.9e-177 624.4 563 65.9
C05p44360 Brassica napus HOM05D001224 ORTHO05D014478 1.6e-170 603.2 471 73.0
BcaC05g28451 Brassica carinata HOM05D001224 ORTHO05D014478 4.0e-169 598.6 551 65.0
BcaC07g37040 Brassica carinata HOM05D001224 ORTHO05D010571 1.4e-153 547.0 546 60.8
A01p25420 Brassica napus HOM05D001224 ORTHO05D014478 1.6e-149 533.5 465 67.3
BcaC05g26849 Brassica carinata HOM05D001224 ORTHO05D014478 1.1e-145 520.8 500 63.2
BcaC08g44195 Brassica carinata HOM05D001224 ORTHO05D014478 8.8e-140 501.1 552 58.0
BolC8t47204H Brassica oleracea HOM05D001224 ORTHO05D010571 1.1e-137 494.2 464 62.9
BcaC02g09037 Brassica carinata HOM05D001224 ORTHO05D014478 1.4e-137 493.8 529 58.6
C05p18370 Brassica napus HOM05D001224 ORTHO05D042117 2.9e-135 486.1 504 61.1
C03p58300 Brassica napus HOM05D001224 ORTHO05D010571 4.7e-133 478.8 473 61.7
C07p00680 Brassica napus HOM05D001224 ORTHO05D003542 1.0e-132 477.6 467 62.7
C06p26600 Brassica napus HOM05D001224 ORTHO05D014478 3.3e-131 472.6 407 68.6
BcaC02g12294 Brassica carinata HOM05D001224 ORTHO05D014478 8.2e-130 468.0 446 64.1
BolC5t33261H Brassica oleracea HOM05D001224 ORTHO05D014478 5.9e-128 461.8 325 78.8
C04p55400 Brassica napus HOM05D001224 ORTHO05D003542 1.8e-124 450.3 362 71.5
BraA07t28368Z Brassica rapa HOM05D001224 ORTHO05D003542 8.2e-122 441.4 364 70.6
BolC4t25070H Brassica oleracea HOM05D001224 ORTHO05D014478 7.0e-113 411.8 258 86.0
C01p45400 Brassica napus HOM05D001224 ORTHO05D010571 7.7e-112 408.3 399 61.4
BcaC05g27630 Brassica carinata HOM05D001224 ORTHO05D001170 1.1e-92 344.7 338 62.7
BcaC05g28169 Brassica carinata HOM05D001224 ORTHO05D003044 3.1e-92 343.2 478 51.3
BcaC01g02927 Brassica carinata HOM05D001224 ORTHO05D014478 1.6e-88 330.9 364 56.9
C05p42050 Brassica napus HOM05D001224 ORTHO05D003044 1.0e-87 328.2 200 87.0
BcaC03g17086 Brassica carinata HOM05D001224 ORTHO05D010571 2.3e-87 327.0 394 53.8
BcaC05g27629 Brassica carinata HOM05D001224 ORTHO05D010571 5.4e-81 305.8 452 51.1
C01p48020 Brassica napus HOM05D001224 ORTHO05D010571 9.2e-81 305.1 330 57.0
C05p36130 Brassica napus HOM05D001224 ORTHO05D010571 2.5e-78 297.0 332 55.4
A10p08880 Brassica napus HOM05D001224 ORTHO05D010571 5.6e-78 295.8 390 51.8
BraA01t02476Z Brassica rapa HOM05D001224 ORTHO05D003542 4.7e-77 292.7 287 61.7
BcaC02g11120 Brassica carinata HOM05D001224 ORTHO05D010571 2.4e-76 290.4 458 46.3
C05p37780 Brassica napus HOM05D001224 ORTHO05D010571 6.8e-76 288.9 292 59.9
BolC9t59175H Brassica oleracea HOM05D001224 ORTHO05D042117 1.6e-72 277.7 326 55.5
C07p01220 Brassica napus HOM05D001224 ORTHO05D010571 1.3e-66 258.1 332 50.3
C07p08920 Brassica napus HOM05D001224 ORTHO05D010571 8.4e-66 255.4 329 52.0
BolC5t31444H Brassica oleracea HOM05D001224 ORTHO05D003044 1.4e-65 254.6 254 60.6
A08p08810 Brassica napus HOM05D001224 ORTHO05D010571 4.2e-65 253.1 332 50.3
BolC5t30546H Brassica oleracea HOM05D001224 ORTHO05D010571 4.2e-65 253.1 332 51.2
BcaB01g01183 Brassica carinata HOM05D001224 ORTHO05D019989 9.3e-65 251.9 451 43.2
C01p41550 Brassica napus HOM05D001224 ORTHO05D010571 4.6e-64 249.6 332 50.3
C04p05530 Brassica napus HOM05D001224 ORTHO05D010571 6.0e-64 249.2 332 50.9
BcaC05g27783 Brassica carinata HOM05D001224 ORTHO05D000395 1.4e-60 238.0 391 44.0
BolC7t41307H Brassica oleracea HOM05D001224 ORTHO05D010571 3.1e-60 236.9 281 54.4
BraA03t15283Z Brassica rapa HOM05D001224 ORTHO05D010571 6.4e-58 229.2 364 44.2
BcaC05g27135 Brassica carinata HOM05D001224 ORTHO05D010571 6.0e-56 222.6 188 66.0
BcaB05g24223 Brassica carinata HOM05D001224 ORTHO05D019989 1.1e-54 218.4 397 41.6
BcaB06g27207 Brassica carinata HOM05D001224 ORTHO05D019989 1.1e-54 218.4 483 38.1
C05p27310 Brassica napus HOM05D001224 ORTHO05D010571 7.6e-43 179.1 290 46.6
BolC1t03176H Brassica oleracea HOM05D001224 ORTHO05D010571 5.5e-41 172.9 170 60.6
BcaC09g48604 Brassica carinata HOM05D001224 ORTHO05D018692 1.6e-40 171.4 357 39.8
BolC8t49589H Brassica oleracea HOM05D001224 ORTHO05D010571 1.8e-39 167.9 185 57.3
BcaC05g25880 Brassica carinata HOM05D001224 ORTHO05D018692 1.5e-38 164.9 330 42.4
C07p12000 Brassica napus HOM05D001224 ORTHO05D003542 1.9e-38 164.5 196 52.0
C02p15640 Brassica napus HOM05D001224 ORTHO05D010571 3.3e-38 163.7 156 59.6
C07p01170 Brassica napus HOM05D001224 ORTHO05D003044 7.4e-38 162.5 145 66.9
BolC5t33158H Brassica oleracea HOM05D001224 ORTHO05D010571 9.7e-38 162.2 185 54.1
C07p01190 Brassica napus HOM05D001224 ORTHO05D000395 1.3e-37 161.8 137 66.4
C05p30230 Brassica napus HOM05D001224 ORTHO05D010571 1.6e-37 161.4 156 59.0
C01p41540 Brassica napus HOM05D001224 ORTHO05D041302 2.8e-37 160.6 97 85.6
C06p04810 Brassica napus HOM05D001224 ORTHO05D010571 2.8e-37 160.6 155 59.4
BolC5t33157H Brassica oleracea HOM05D001224 ORTHO05D041302 5.3e-36 156.4 97 83.5
C07p01180 Brassica napus HOM05D001224 ORTHO05D010571 9.0e-36 155.6 168 59.5
BolC4t26388H Brassica oleracea HOM05D001224 ORTHO05D000395 4.5e-35 153.3 111 74.8
BcaB01g02585 Brassica carinata HOM05D001224 ORTHO05D000395 1.0e-34 152.1 172 51.7
BcaC05g28166 Brassica carinata HOM05D001224 ORTHO05D021713 1.3e-34 151.8 208 51.0
A10p08870 Brassica napus HOM05D001224 ORTHO05D099217 4.6e-32 143.3 97 79.4
BolC4t25341H Brassica oleracea HOM05D001224 ORTHO05D010571 6.1e-32 142.9 193 50.8
BolC5t32336H Brassica oleracea HOM05D001224 ORTHO05D018692 3.0e-31 140.6 183 50.3
C07p06960 Brassica napus HOM05D001224 ORTHO05D024547 1.5e-30 138.3 120 64.2
BcaB04g18242 Brassica carinata HOM05D001224 ORTHO05D010571 3.3e-30 137.1 356 36.0
BcaB05g24682 Brassica carinata HOM05D001224 ORTHO05D016074 3.3e-30 137.1 320 35.6
C07p01210 Brassica napus HOM05D001224 ORTHO05D003044 7.4e-30 136.0 116 67.2
BcaB01g02584 Brassica carinata HOM05D001224 ORTHO05D019989 4.8e-29 133.3 258 40.7
BolC6t36715H Brassica oleracea HOM05D001224 ORTHO05D024547 4.8e-29 133.3 106 69.8
BraSC37t46113Z Brassica rapa HOM05D000675 ORTHO05D000395 6.3e-29 132.9 126 59.5
C04p05510 Brassica napus HOM05D001224 ORTHO05D003542 1.4e-28 131.7 182 47.3
BcaB05g22948 Brassica carinata HOM05D001224 ORTHO05D010571 7.7e-27 125.9 350 32.6
C07p08930 Brassica napus HOM05D001224 ORTHO05D028095 8.5e-26 122.5 64 93.8
BolC7t41309H Brassica oleracea HOM05D001224 ORTHO05D028095 8.5e-26 122.5 64 93.8
BolC6t35441H Brassica oleracea HOM05D001224 ORTHO05D003542 4.2e-25 120.2 62 98.4
C07p06970 Brassica napus HOM05D001224 ORTHO05D010571 1.6e-24 118.2 104 62.5
BcaB04g17485 Brassica carinata HOM05D001224 ORTHO05D019989 7.9e-24 115.9 362 32.0
BraA06t25342Z Brassica rapa HOM05D001224 ORTHO05D028095 3.9e-23 113.6 64 87.5
BcaB05g22878 Brassica carinata HOM05D001224 ORTHO05D018563 5.1e-23 113.2 291 34.0
BcaC09g48835 Brassica carinata HOM05D001224 ORTHO05D010571 8.8e-23 112.5 229 43.2
BcaB06g25737 Brassica carinata HOM05D001224 ORTHO05D016074 2.6e-22 110.9 170 42.4
BraSC37t46114Z Brassica rapa HOM05D001224 ORTHO05D028095 5.7e-22 109.8 64 85.9
BcaB02g11183 Brassica carinata HOM05D001224 ORTHO05D016074 7.4e-22 109.4 293 32.1
BcaB02g11463 Brassica carinata HOM05D001224 ORTHO05D000309 7.4e-22 109.4 254 35.4
C04p55410 Brassica napus HOM05D001224 ORTHO05D010571 3.7e-21 107.1 52 98.1
BolC5t31762H Brassica oleracea HOM05D001224 ORTHO05D010571 8.2e-21 105.9 52 96.2
BolC1t04759H Brassica oleracea HOM05D001224 ORTHO05D010571 1.8e-20 104.8 52 96.2
BolC5t32442H Brassica oleracea HOM05D001224 ORTHO05D024276 7.7e-19 99.4 190 36.3
BraA01t02478Z Brassica rapa HOM05D001224 ORTHO05D010571 1.0e-18 99.0 51 94.1
BcaB03g16206 Brassica carinata HOM05D001224 ORTHO05D010571 1.7e-18 98.2 439 29.2
BcaB01g01037 Brassica carinata HOM05D001224 ORTHO05D010571 5.0e-18 96.7 343 29.4
BcaB04g17609 Brassica carinata HOM05D001224 ORTHO05D019989 5.0e-18 96.7 336 31.5
C05p36970 Brassica napus HOM05D001224 ORTHO05D024276 6.5e-18 96.3 190 35.8
BcaC06g35971 Brassica carinata HOM05D001224 ORTHO05D092347 4.2e-17 93.6 112 57.1
BcaB06g26684 Brassica carinata HOM05D001224 ORTHO05D010571 1.0e-15 89.0 295 31.5
BcaB06g27850 Brassica carinata HOM05D001224 ORTHO05D016074 2.3e-15 87.8 144 38.2
C07p08900 Brassica napus HOM05D001224 ORTHO05D016739 1.1e-14 85.5 89 47.2
BolC4t23819H Brassica oleracea HOM05D002776 ORTHO05D000395 1.1e-14 85.5 82 48.8
BolC7t41304H Brassica oleracea HOM05D001224 ORTHO05D016739 1.1e-14 85.5 89 47.2
BcaB06g25741 Brassica carinata HOM05D001224 ORTHO05D016074 1.5e-14 85.1 63 63.5
BcaB08g35070 Brassica carinata HOM05D001224 ORTHO05D010571 2.2e-13 81.3 344 28.2
C04p35170 Brassica napus HOM05D001224 ORTHO05D010571 2.2e-13 81.3 40 97.5
BcaB06g26650 Brassica carinata HOM05D001224 ORTHO05D010571 8.2e-13 79.3 304 29.3
BolC1t04760H Brassica oleracea HOM05D001224 ORTHO05D024547 3.1e-12 77.4 155 41.3
BcaB04g17705 Brassica carinata HOM05D001224 ORTHO05D016074 5.3e-12 76.6 59 59.3
BcaB04g17592 Brassica carinata HOM05D001224 ORTHO05D016074 7.0e-12 76.3 53 69.8
BcaB08g35078 Brassica carinata HOM05D001224 ORTHO05D016074 7.0e-12 76.3 55 63.6
BcaB05g23791 Brassica carinata HOM05D001224 ORTHO05D010571 9.1e-12 75.9 135 38.5
BolC3t19180H Brassica oleracea HOM05D001224 ORTHO05D042758 1.2e-11 75.5 89 41.6
BolC3t19387H Brassica oleracea HOM05D001224 ORTHO05D016111 1.2e-11 75.5 192 29.2
BolC4t22579H Brassica oleracea HOM05D002776 ORTHO05D024276 1.2e-11 75.5 82 43.9
BcaB02g11218 Brassica carinata HOM05D001224 ORTHO05D010571 1.6e-11 75.1 338 27.8
BraA06t25343Z Brassica rapa HOM05D001224 ORTHO05D024547 2.0e-11 74.7 69 59.4
BcaB06g27848 Brassica carinata HOM05D001224 ORTHO05D094661 4.5e-11 73.6 53 66.0
BcaB04g16976 Brassica carinata HOM05D001224 ORTHO05D016074 7.7e-11 72.8 50 70.0
BcaB01g01374 Brassica carinata HOM05D001224 ORTHO05D018563 8.5e-10 69.3 220 36.4
C05p42020 Brassica napus HOM05D001224 ORTHO05D028247 1.1e-09 68.9 61 67.2
BolC5t31763H Brassica oleracea HOM05D001224 ORTHO05D028247 1.1e-09 68.9 61 67.2
BolC4t26389H Brassica oleracea HOM05D001224 ORTHO05D028247 1.5e-09 68.6 63 61.9
C05p45370 Brassica napus HOM05D000675 ORTHO05D000395 1.9e-09 68.2 35 94.3
C07p08950 Brassica napus HOM05D001224 ORTHO05D042023 1.9e-09 68.2 36 91.7
BolC9t57112H Brassica oleracea HOM05D001224 ORTHO05D012331 1.9e-09 68.2 284 25.0
BcaB06g26507 Brassica carinata HOM05D001224 ORTHO05D010571 3.2e-09 67.4 137 37.2
BraA06t25344Z Brassica rapa HOM05D001224 ORTHO05D028247 3.2e-09 67.4 36 88.9
BraA07t28367Z Brassica rapa HOM05D000675 ORTHO05D000395 4.2e-09 67.0 35 91.4
C05p42010 Brassica napus HOM05D000675 ORTHO05D000395 7.2e-09 66.2 35 91.4
C03p69230 Brassica napus HOM05D001224 ORTHO05D042758 9.4e-09 65.9 64 45.3
BraA03t15284Z Brassica rapa HOM05D001224 ORTHO05D042023 1.2e-08 65.5 36 88.9
BraA01t01571Z Brassica rapa HOM05D000675 ORTHO05D000395 1.6e-08 65.1 43 79.1
BolC5t33259H Brassica oleracea HOM05D000675 ORTHO05D000395 2.7e-08 64.3 32 96.9
BcaB07g33938 Brassica carinata HOM05D001224 ORTHO05D019989 3.6e-08 63.9 175 33.1
BolC3t18754H Brassica oleracea HOM05D002776 ORTHO05D000395 6.1e-08 63.2 85 40.0
BolC4t22590H Brassica oleracea HOM05D002776 ORTHO05D016111 6.1e-08 63.2 228 27.2
BcaB03g16627 Brassica carinata HOM05D001224 ORTHO05D018563 8.0e-08 62.8 350 27.4
C03p64930 Brassica napus HOM05D002776 ORTHO05D000395 1.0e-07 62.4 83 41.0
BcaB06g26645 Brassica carinata HOM05D001224 ORTHO05D010571 1.8e-07 61.6 288 29.2
BcaC06g35526 Brassica carinata HOM05D002776 ORTHO05D012331 1.8e-07 61.6 332 24.1
A07p05870 Brassica napus HOM05D000675 ORTHO05D000395 2.3e-07 61.2 35 85.7
BraA06t25784Z Brassica rapa HOM05D001224 ORTHO05D012331 3.0e-07 60.8 164 28.7
BolC6t35536H Brassica oleracea HOM05D000675 ORTHO05D000395 5.2e-07 60.1 64 50.0
BcaC04g20542 Brassica carinata HOM05D002776 ORTHO05D012331 6.8e-07 59.7 75 41.3
BcaB08g35462 Brassica carinata HOM05D001224 ORTHO05D016074 8.8e-07 59.3 68 51.5
BolC5t31443H Brassica oleracea HOM05D001224 ORTHO05D010571 8.8e-07 59.3 29 100.0
BcaB06g26680 Brassica carinata HOM05D001224 ORTHO05D018563 1.2e-06 58.9 134 34.3
BcaC06g35617 Brassica carinata HOM05D001224 ORTHO05D016739 2.0e-06 58.2 318 24.5
BcaC02g11069 Brassica carinata HOM05D002776 ORTHO05D012331 2.6e-06 57.8 317 25.6
BcaC07g37922 Brassica carinata HOM05D001224 ORTHO05D016739 2.6e-06 57.8 155 27.7
BcaB06g26681 Brassica carinata HOM05D001224 ORTHO05D016739 5.7e-06 56.6 129 30.2
BolC7t41115H Brassica oleracea HOM05D001224 ORTHO05D027936 7.5e-06 56.2 29 96.6
BcaB02g10769 Brassica carinata HOM05D002776 ORTHO05D012331 9.7e-06 55.8 64 45.3


User provided reference genes

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