Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g09813 Brassica carinata HOM05D021582 ORTHO05D024203 3.7e-32 141.0 73 100.0
C04p36320 Brassica napus HOM05D021582 ORTHO05D024203 1.3e-21 105.9 54 100.0
BolC4t25173H Brassica oleracea HOM05D021582 ORTHO05D024203 1.3e-21 105.9 54 100.0
BolC5t32663H Brassica oleracea HOM05D021582 ORTHO05D024203 2.3e-21 105.1 65 89.2
C05p39270 Brassica napus HOM05D021582 ORTHO05D024203 1.0e-18 96.3 72 73.6
Sp6g17740 Schrenkiella parvula HOM05D001827 ORTHO05D001790 2.1e-11 72.0 67 64.2
AT5G55860 Arabidopsis thaliana HOM05D001827 ORTHO05D001790 6.1e-11 70.5 67 62.7
Thhalv10012934m.g Eutrema salsugineum HOM05D001827 ORTHO05D001790 3.1e-10 68.2 67 61.2
Carub.0008s1622 Capsella rubella HOM05D001827 ORTHO05D001790 5.2e-10 67.4 67 59.7
AL8G31440 Arabidopsis lyrata HOM05D001827 ORTHO05D001790 1.2e-09 66.2 67 59.7
A10p13080 Brassica napus HOM05D001827 ORTHO05D001790 1.5e-09 65.9 67 59.7
CARHR269240 Cardamine hirsuta HOM05D001827 ORTHO05D001790 1.5e-09 65.9 67 58.2
BcaC04g20191 Brassica carinata HOM05D001827 ORTHO05D001790 4.4e-09 64.3 67 58.2
C09p46840 Brassica napus HOM05D001827 ORTHO05D001790 4.4e-09 64.3 67 58.2
BolC9t57534H Brassica oleracea HOM05D001827 ORTHO05D001790 4.4e-09 64.3 67 58.2
Nn1g07551 Nelumbo nucifera HOM05D001827 ORTHO05D001790 4.6e-06 54.3 67 49.3
C03p16210 Brassica napus HOM05D001827 ORTHO05D001790 7.8e-06 53.5 67 50.7
TWI38G2079 Tripterygium wilfordii HOM05D001827 ORTHO05D001790 7.8e-06 53.5 66 53.0


User provided reference genes

Program Settings