Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g09767 Brassica carinata HOM05D006121 ORTHO05D009559 3.0e-148 528.5 267 100.0
BcaC01g06835 Brassica carinata HOM05D006121 ORTHO05D009559 6.2e-101 371.3 268 71.6
BcaC09g49299 Brassica carinata HOM05D006121 ORTHO05D009559 1.2e-99 367.1 268 72.0
BcaC07g37147 Brassica carinata HOM05D006121 ORTHO05D009559 3.0e-95 352.4 262 70.6
BcaC02g11248 Brassica carinata HOM05D006121 ORTHO05D009559 6.8e-84 314.7 271 60.9
BcaC08g43580 Brassica carinata HOM05D006121 ORTHO05D009559 4.8e-77 292.0 250 65.6
BcaC08g42951 Brassica carinata HOM05D006121 ORTHO05D009559 2.0e-75 286.6 174 85.1
BcaC06g36167 Brassica carinata HOM05D006121 ORTHO05D009559 4.4e-75 285.4 248 64.1
BcaC02g11960 Brassica carinata HOM05D006121 ORTHO05D009559 5.3e-68 261.9 257 56.8
BcaC01g02132 Brassica carinata HOM05D006121 ORTHO05D009559 2.3e-63 246.5 174 70.7
BcaC05g27793 Brassica carinata HOM05D006121 ORTHO05D009559 2.1e-61 240.0 173 72.3
BcaC08g43032 Brassica carinata HOM05D006121 ORTHO05D009559 1.2e-59 234.2 190 66.3
BolC3t20163H Brassica oleracea HOM05D006121 ORTHO05D009559 6.5e-58 228.4 265 53.6
BcaC05g27675 Brassica carinata HOM05D006121 ORTHO05D009559 1.4e-57 227.3 189 63.5
BcaC03g15125 Brassica carinata HOM05D006121 ORTHO05D009559 8.4e-50 201.4 190 58.4
BcaC04g22047 Brassica carinata HOM05D006121 ORTHO05D009559 3.2e-49 199.5 154 66.9
BcaC05g28043 Brassica carinata HOM05D006121 ORTHO05D009559 1.9e-46 190.3 105 87.6
BcaC05g28468 Brassica carinata HOM05D006121 ORTHO05D009559 3.3e-46 189.5 105 87.6
BcaC03g16486 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-45 187.6 105 87.6
BcaC03g16667 Brassica carinata HOM05D006121 ORTHO05D009559 1.2e-43 181.0 165 61.8
BcaC03g16521 Brassica carinata HOM05D006121 ORTHO05D009559 6.1e-40 168.7 146 54.8
BcaC09g49745 Brassica carinata HOM05D006121 ORTHO05D009559 1.4e-39 167.5 139 59.0
BcaC04g21502 Brassica carinata HOM05D006121 ORTHO05D009559 2.3e-39 166.8 137 57.7
BolC7t41205H Brassica oleracea HOM05D006121 ORTHO05D013509 1.5e-35 154.1 192 52.6
BcaC09g49729 Brassica carinata HOM05D006121 ORTHO05D009559 2.2e-34 150.2 130 56.2
BcaC01g00176 Brassica carinata HOM05D006121 ORTHO05D009559 3.8e-34 149.4 82 82.9
BcaC08g42838 Brassica carinata HOM05D006121 ORTHO05D009559 1.1e-33 147.9 91 74.7
BcaC03g17371 Brassica carinata HOM05D006121 ORTHO05D009559 1.6e-32 144.1 152 44.7
BcaC06g36507 Brassica carinata HOM05D006121 ORTHO05D009559 6.7e-31 138.7 212 36.3
BcaC05g27433 Brassica carinata HOM05D006121 ORTHO05D009559 8.8e-31 138.3 224 36.2
BcaC03g15130 Brassica carinata HOM05D006121 ORTHO05D009559 2.6e-30 136.7 156 41.7
BcaC04g20762 Brassica carinata HOM05D006121 ORTHO05D009559 2.6e-30 136.7 222 36.5
BcaC04g23210 Brassica carinata HOM05D006121 ORTHO05D009559 5.7e-30 135.6 156 42.3
BcaC04g20823 Brassica carinata HOM05D006121 ORTHO05D009559 6.3e-29 132.1 75 85.3
BcaC09g50206 Brassica carinata HOM05D006121 ORTHO05D009559 2.4e-28 130.2 83 72.3
BcaC01g00391 Brassica carinata HOM05D006121 ORTHO05D009559 4.1e-28 129.4 85 77.6
BcaC03g16371 Brassica carinata HOM05D006121 ORTHO05D009559 4.1e-28 129.4 156 42.3
BcaC03g15823 Brassica carinata HOM05D006121 ORTHO05D009559 5.3e-28 129.0 83 69.9
BcaC07g37897 Brassica carinata HOM05D006121 ORTHO05D009559 1.2e-27 127.9 134 45.5
BcaC07g37083 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-26 124.4 85 75.3
BcaC07g37447 Brassica carinata HOM05D006121 ORTHO05D009559 1.1e-25 121.3 160 51.2
BcaC03g15126 Brassica carinata HOM05D006121 ORTHO05D009559 5.5e-25 119.0 74 81.1
BcaC09g49406 Brassica carinata HOM05D006121 ORTHO05D013509 1.2e-24 117.9 160 48.1
BolC8t48817H Brassica oleracea HOM05D006121 ORTHO05D009559 1.6e-24 117.5 94 66.0
BraA09t38607Z Brassica rapa HOM05D006121 ORTHO05D009559 3.6e-24 116.3 142 38.7
BcaC01g02238 Brassica carinata HOM05D006121 ORTHO05D009559 1.5e-22 110.9 206 33.5
BcaC03g16227 Brassica carinata HOM05D006121 ORTHO05D009559 2.0e-22 110.5 250 32.0
BcaC06g36213 Brassica carinata HOM05D006121 ORTHO05D091691 2.2e-21 107.1 133 51.9
Carub.0003s2904 Capsella rubella HOM05D006121 ORTHO05D009559 2.2e-21 107.1 276 27.9
BcaC01g01842 Brassica carinata HOM05D006121 ORTHO05D009559 2.8e-21 106.7 64 82.8
BcaC04g23066 Brassica carinata HOM05D006121 ORTHO05D009559 3.7e-21 106.3 181 34.3
C05p29190 Brassica napus HOM05D006121 ORTHO05D009559 1.8e-20 104.0 153 39.2
BraA06t25079Z Brassica rapa HOM05D006121 ORTHO05D009559 3.1e-20 103.2 144 36.8
BcaC07g37903 Brassica carinata HOM05D006121 ORTHO05D009559 5.3e-20 102.4 157 37.6
BcaC01g05819 Brassica carinata HOM05D006121 ORTHO05D009559 9.1e-20 101.7 156 35.3
BolC9t56759H Brassica oleracea HOM05D006121 ORTHO05D009559 2.7e-19 100.1 80 51.2
BcaC03g16668 Brassica carinata HOM05D006121 ORTHO05D009559 2.9e-18 96.7 60 75.0
BraA05t21496Z Brassica rapa HOM05D000633 ORTHO05D000477 8.5e-18 95.1 173 39.3
BolC7t41498H Brassica oleracea HOM05D006121 ORTHO05D009559 3.6e-16 89.7 94 44.7
BcaC04g20594 Brassica carinata HOM05D006121 ORTHO05D009559 5.2e-15 85.9 76 51.3
AL6G42690 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 5.4e-12 75.9 193 28.5
BcaC08g42837 Brassica carinata HOM05D006121 ORTHO05D009559 7.0e-12 75.5 50 70.0
AL1G47450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.5e-11 73.2 193 26.9
AL4G24140 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 4.5e-11 72.8 193 28.0
AL8G20450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 4.5e-11 72.8 139 29.5
AL4G14310 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 5.9e-11 72.4 138 28.3
AL1G61970 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 7.7e-11 72.0 193 27.5
AL8G45410 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.0e-10 71.6 193 27.5
AL1G65160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.3e-10 71.2 193 26.9
AL2G23360 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.3e-10 71.2 193 27.5
AL3G37710 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.3e-10 71.2 184 28.3
AL3G38160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.3e-10 71.2 138 29.7
AL5G23160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.3e-10 71.2 184 28.3
AL6G47370 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.3e-10 71.2 197 25.9
AL5G12240 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.8e-10 69.7 193 27.5
AL2G18400 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 5.0e-10 69.3 102 33.3
AL8G11870 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 5.0e-10 69.3 102 33.3
AL8G33480 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 5.0e-10 69.3 102 33.3
AL9U10230 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 5.0e-10 69.3 272 26.1
AL1G57330 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 6.5e-10 68.9 102 33.3
AT1G51172 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 6.5e-10 68.9 91 38.5
AT4G03830 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 6.5e-10 68.9 91 36.3
BcaC07g37265 Brassica carinata HOM05D006121 ORTHO05D009559 1.1e-09 68.2 38 86.8
BcaB06g26791 Brassica carinata HOM05D033500 ORTHO05D009559 3.2e-09 66.6 147 37.4
CARHR174650 Cardamine hirsuta HOM05D008458 ORTHO05D010628 5.5e-09 65.9 144 25.7
BolC3t19110H Brassica oleracea HOM05D006121 ORTHO05D043263 1.2e-08 64.7 46 67.4
BcaB04g17962 Brassica carinata HOM05D006121 ORTHO05D009559 2.1e-08 63.9 89 37.1
AL1G50390 Arabidopsis lyrata HOM05D009492 ORTHO05D011693 2.7e-08 63.5 287 23.7
BcaC06g35841 Brassica carinata HOM05D006121 ORTHO05D009559 4.7e-08 62.8 38 78.9
Carub.0006s2644 Capsella rubella HOM05D009492 ORTHO05D011693 4.7e-08 62.8 139 28.8
AL2G23320 Arabidopsis lyrata HOM05D009492 ORTHO05D011693 8.0e-08 62.0 238 25.6
Carub.0007s3731 Capsella rubella HOM05D009492 ORTHO05D011693 8.0e-08 62.0 272 25.0
Carub.0008s0728 Capsella rubella HOM05D009492 ORTHO05D011693 1.4e-07 61.2 139 29.5
AL6G45550 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.8e-07 60.8 90 32.2
Carub.0001s3399 Capsella rubella HOM05D008386 ORTHO05D010572 1.8e-07 60.8 260 27.7
BolC9t58013H Brassica oleracea HOM05D006121 ORTHO05D009559 2.3e-07 60.5 67 37.3
CARHR115630 Cardamine hirsuta HOM05D008458 ORTHO05D010628 3.0e-07 60.1 145 26.9
Carub.0007s3611 Capsella rubella HOM05D009492 ORTHO05D011693 6.8e-07 58.9 273 23.8
Carub.0006s2663 Capsella rubella HOM05D009492 ORTHO05D011693 1.5e-06 57.8 105 30.5
Carub.0002s0942 Capsella rubella HOM05D009492 ORTHO05D011693 5.7e-06 55.8 103 29.1


User provided reference genes

Program Settings