Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g09668 Brassica carinata HOM05D009227 ORTHO05D009956 4.6e-38 161.4 127 100.0
C04p45370 Brassica napus HOM05D009227 ORTHO05D009956 4.6e-38 161.4 127 100.0
BolC4t26119H Brassica oleracea HOM05D009227 ORTHO05D009956 4.6e-38 161.4 127 100.0
BraA04t16832Z Brassica rapa HOM05D009227 ORTHO05D009956 9.6e-36 153.7 128 97.7
A04p11640 Brassica napus HOM05D009227 ORTHO05D009956 4.0e-34 148.3 128 95.3
BcaB06g27244 Brassica carinata HOM05D009227 ORTHO05D009956 9.0e-34 147.1 128 95.3
Thhalv10027989m.g Eutrema salsugineum HOM05D009227 ORTHO05D009956 7.6e-17 90.9 102 76.5
SpUn1356_0010 Schrenkiella parvula HOM05D009227 ORTHO05D009956 6.5e-16 87.8 128 57.8
CARHR264020 Cardamine hirsuta HOM05D009227 ORTHO05D009956 3.6e-14 82.0 97 51.5
Carub.0007s3707 Capsella rubella HOM05D009227 ORTHO05D009956 6.1e-14 81.3 127 48.8
AT5G38790 Arabidopsis thaliana HOM05D009227 ORTHO05D009956 1.4e-13 80.1 103 49.5
AL7G51640 Arabidopsis lyrata HOM05D009227 ORTHO05D009956 1.9e-12 76.3 137 43.8
Sp2g18210 Schrenkiella parvula HOM05D009227 ORTHO05D009956 2.2e-11 72.8 129 43.4
BcaC06g33727 Brassica carinata HOM05D009227 ORTHO05D009956 1.8e-10 69.7 122 41.0
C07p38630 Brassica napus HOM05D009227 ORTHO05D009956 1.8e-10 69.7 122 41.0
BolC7t44384H Brassica oleracea HOM05D009227 ORTHO05D009956 1.8e-10 69.7 122 41.0
A06p39660 Brassica napus HOM05D009227 ORTHO05D009956 6.9e-10 67.8 120 40.8
BraA06t26881Z Brassica rapa HOM05D009227 ORTHO05D009956 6.9e-10 67.8 120 40.8
Carub.0009s0002 Capsella rubella HOM05D009227 ORTHO05D009956 6.9e-10 67.8 130 37.7
BcaC06g30842 Brassica carinata HOM05D009227 ORTHO05D009956 9.1e-10 67.4 133 40.6
Thhalv10005597m.g Eutrema salsugineum HOM05D009227 ORTHO05D009956 1.5e-09 66.6 106 42.5
A02p37090 Brassica napus HOM05D009227 ORTHO05D009956 1.7e-08 63.2 37 75.7
C02p56090 Brassica napus HOM05D009227 ORTHO05D009956 1.7e-08 63.2 37 75.7
BolC2t11666H Brassica oleracea HOM05D009227 ORTHO05D009956 1.7e-08 63.2 37 75.7
BraA02t08695Z Brassica rapa HOM05D009227 ORTHO05D009956 1.7e-08 63.2 37 75.7
Aa31LG9G16880 Aethionema arabicum HOM05D009227 ORTHO05D009956 1.1e-07 60.5 132 37.9
BcaB07g30061 Brassica carinata HOM05D009227 ORTHO05D009956 2.5e-07 59.3 94 40.4


User provided reference genes

Program Settings