Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g09570 Brassica carinata HOM05D002126 ORTHO05D032751 2.6e-56 221.9 113 100.0
C04p44260 Brassica napus HOM05D002126 ORTHO05D032751 2.3e-28 129.0 67 100.0
BcaC03g14393 Brassica carinata HOM05D002126 ORTHO05D032751 1.1e-22 110.2 66 87.9
BcaB07g31902 Brassica carinata HOM05D002126 ORTHO05D002195 8.9e-17 90.5 65 75.4
Thhalv10007212m.g Eutrema salsugineum HOM05D002126 ORTHO05D002195 3.4e-16 88.6 65 73.8
BcaB07g32206 Brassica carinata HOM05D002126 ORTHO05D002195 5.8e-16 87.8 65 73.8
Sp1g16820 Schrenkiella parvula HOM05D002126 ORTHO05D002195 1.3e-15 86.7 82 63.4
BcaC07g38954 Brassica carinata HOM05D002126 ORTHO05D002195 1.7e-15 86.3 66 74.2
A08p30140 Brassica napus HOM05D002126 ORTHO05D002195 1.7e-15 86.3 66 74.2
C08p19000 Brassica napus HOM05D002126 ORTHO05D002195 1.7e-15 86.3 66 74.2
BolC8t49524H Brassica oleracea HOM05D002126 ORTHO05D002195 1.7e-15 86.3 66 74.2
BraA08t34948Z Brassica rapa HOM05D002126 ORTHO05D002195 1.7e-15 86.3 66 74.2
A06p15060 Brassica napus HOM05D002126 ORTHO05D002195 2.2e-15 85.9 65 72.3
BraA06t24621Z Brassica rapa HOM05D002126 ORTHO05D002195 2.2e-15 85.9 65 72.3
BcaB03g12951 Brassica carinata HOM05D002126 ORTHO05D002195 2.9e-15 85.5 71 69.0
BcaC05g25786 Brassica carinata HOM05D002126 ORTHO05D002195 1.4e-14 83.2 65 72.3
C05p17260 Brassica napus HOM05D002126 ORTHO05D002195 1.4e-14 83.2 65 72.3
BolC5t30426H Brassica oleracea HOM05D002126 ORTHO05D002195 4.1e-14 81.6 65 70.8
Carub.0001s1849 Capsella rubella HOM05D002126 ORTHO05D002195 3.3e-11 72.0 83 59.0
Aa31LG7G3610 Aethionema arabicum HOM05D002126 ORTHO05D002195 4.3e-11 71.6 68 63.2
CARHR019490 Cardamine hirsuta HOM05D002126 ORTHO05D002195 4.7e-10 68.2 66 65.2
AL1G31380 Arabidopsis lyrata HOM05D002126 ORTHO05D002195 3.1e-09 65.5 83 56.6
AT1G18840 Arabidopsis thaliana HOM05D002126 ORTHO05D002195 6.8e-09 64.3 66 60.6
A09p59650 Brassica napus HOM05D023182 ORTHO05D024127 6.8e-09 64.3 48 70.8
BcaB02g11023 Brassica carinata HOM05D002268 ORTHO05D006626 6.4e-07 57.8 65 58.5
Carub.0002s2148 Capsella rubella HOM05D002126 ORTHO05D002195 8.3e-07 57.4 68 55.9
Sp5g29810 Schrenkiella parvula HOM05D002126 ORTHO05D002195 4.1e-06 55.1 68 55.9
Thhalv10018321m.g Eutrema salsugineum HOM05D002126 ORTHO05D002195 7.1e-06 54.3 68 55.9


User provided reference genes

Program Settings