Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g09567 Brassica carinata HOM05D007773 ORTHO05D010097 0.0e+00 1238.4 620 100.0
C04p44210 Brassica napus HOM05D007773 ORTHO05D010097 0.0e+00 1238.4 620 100.0
BolC4t25995H Brassica oleracea HOM05D007773 ORTHO05D010097 0.0e+00 1155.2 589 98.3
A04p10570 Brassica napus HOM05D007773 ORTHO05D010097 0.0e+00 1108.2 595 93.6
BcaB06g27068 Brassica carinata HOM05D007773 ORTHO05D010097 1.4e-289 999.2 627 82.9
BraA04t16721Z Brassica rapa HOM05D007773 ORTHO05D010097 5.5e-278 960.7 668 75.6
A04p10560 Brassica napus HOM05D007773 ORTHO05D010097 6.6e-239 830.9 594 73.7
C04p44190 Brassica napus HOM05D007773 ORTHO05D010097 2.5e-238 828.9 597 73.2
BcaC02g09565 Brassica carinata HOM05D007773 ORTHO05D010097 2.1e-237 825.9 597 73.0
BolC4t25994H Brassica oleracea HOM05D007773 ORTHO05D010097 3.1e-236 822.0 596 73.0
BcaB06g27065 Brassica carinata HOM05D007773 ORTHO05D010097 1.6e-232 809.7 591 73.1
BraA02t05642Z Brassica rapa HOM05D007773 ORTHO05D010097 1.1e-230 803.5 593 71.8
BNapus_Darmor_BZH_scaffold_38p00830 Brassica napus HOM05D007773 ORTHO05D010097 5.6e-230 801.2 593 71.7
Thhalv10027691m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 7.7e-187 657.9 581 58.9
Sp7g04910 Schrenkiella parvula HOM05D007773 ORTHO05D010097 1.1e-185 654.1 595 58.0
CARHR215610 Cardamine hirsuta HOM05D007773 ORTHO05D010097 8.0e-168 594.7 595 53.6
Thhalv10027695m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 3.0e-167 592.8 587 55.5
AL7G46160 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 8.8e-167 591.3 596 54.4
AT5G37460 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.1e-164 584.3 600 53.5
Carub.0007s3260 Capsella rubella HOM05D007773 ORTHO05D010097 1.4e-164 583.9 596 52.9
AL7G46150 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 9.1e-164 581.3 599 54.8
AT5G37470 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 9.1e-164 581.3 600 54.5
Carub.0007s3259 Capsella rubella HOM05D007773 ORTHO05D010097 4.5e-163 578.9 599 53.1
CARHR215200 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.4e-159 567.4 590 52.9
BcaC02g09561 Brassica carinata HOM05D007773 ORTHO05D010097 1.2e-158 564.3 405 72.1
CARHR215570 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.5e-158 563.9 589 52.3
CARHR215560 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.1e-156 557.8 581 52.5
Carub.0007s3255 Capsella rubella HOM05D007773 ORTHO05D010097 9.1e-156 554.7 595 52.1
Carub.0007s3702 Capsella rubella HOM05D007773 ORTHO05D010097 6.3e-149 531.9 595 50.8
AT5G37410 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.3e-146 524.2 603 49.4
BcaC02g09563 Brassica carinata HOM05D007773 ORTHO05D010097 2.1e-144 516.9 379 71.0
CARHR215640 Cardamine hirsuta HOM05D007773 ORTHO05D010097 2.1e-144 516.9 588 49.8
AT5G37920 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 7.5e-142 508.4 593 48.6
AL7G46040 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 2.2e-141 506.9 599 48.7
AL7G46050 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 3.7e-141 506.1 600 48.2
CARHR215650 Cardamine hirsuta HOM05D007773 ORTHO05D010097 7.0e-140 501.9 556 50.4
Carub.0007s3254 Capsella rubella HOM05D007773 ORTHO05D010097 9.2e-140 501.5 583 50.4
Aa31sc146G30 Aethionema arabicum HOM05D007773 ORTHO05D010097 6.6e-138 495.4 570 47.5
Sp7g04850 Schrenkiella parvula HOM05D007773 ORTHO05D010097 4.3e-137 492.7 587 48.0
BolC3t19574H Brassica oleracea HOM05D007773 ORTHO05D010097 4.0e-135 486.1 588 47.4
CARHR215220 Cardamine hirsuta HOM05D007773 ORTHO05D010097 3.4e-134 483.0 606 44.7
AL7G46410 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 3.7e-133 479.6 603 44.8
C03p72760 Brassica napus HOM05D007773 ORTHO05D010097 3.2e-132 476.5 588 46.6
Thhalv10001931m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 4.6e-131 472.6 608 44.9
AT5G37430 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 5.0e-130 469.2 594 46.3
AT4G16530 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 6.6e-130 468.8 570 47.7
BraA08t34655Z Brassica rapa HOM05D007773 ORTHO05D010097 1.1e-129 468.0 588 46.8
A08p27100 Brassica napus HOM05D007773 ORTHO05D010097 3.3e-129 466.5 588 46.6
A08p00180 Brassica napus HOM05D007773 ORTHO05D010097 1.6e-128 464.2 623 46.2
Thhalv10017892m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 2.8e-128 463.4 588 46.8
C03p93320 Brassica napus HOM05D007773 ORTHO05D010097 1.8e-127 460.7 621 45.9
CARHR215670 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.8e-127 460.7 606 45.0
BolC3t21630H Brassica oleracea HOM05D007773 ORTHO05D010097 2.3e-127 460.3 620 46.0
BraA08t32075Z Brassica rapa HOM05D007773 ORTHO05D010097 2.6e-126 456.8 623 45.6
BcaB02g07854 Brassica carinata HOM05D007773 ORTHO05D010097 7.5e-126 455.3 596 46.1
CARHR215620 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.3e-125 454.5 546 48.9
Sp7g04470 Schrenkiella parvula HOM05D007773 ORTHO05D010097 2.2e-125 453.8 609 43.5
Aa31LG4G11940 Aethionema arabicum HOM05D007773 ORTHO05D010097 2.4e-124 450.3 598 43.5
AT5G37650 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.0e-122 444.9 598 43.5
BcaB03g12081 Brassica carinata HOM05D007773 ORTHO05D010097 1.3e-122 444.5 596 43.1
Carub.0007s3252 Capsella rubella HOM05D007773 ORTHO05D010097 2.5e-121 440.3 599 43.4
AL7G46030 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 2.8e-120 436.8 621 41.9
Thhalv10027424m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 6.2e-120 435.6 589 45.3
BcaB05g24027 Brassica carinata HOM05D007773 ORTHO05D010097 9.9e-118 428.3 573 44.7
AT5G37400 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 4.9e-117 426.0 596 42.6
Carub.0007s3280 Capsella rubella HOM05D007773 ORTHO05D010097 7.8e-115 418.7 590 41.9
Sp4g15990 Schrenkiella parvula HOM05D007773 ORTHO05D010097 8.1e-112 408.7 579 43.0
AT5G37420 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 3.2e-108 396.7 599 41.9
AL7G38360 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.7e-93 347.8 370 51.1
AL7G38390 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.7e-93 347.8 370 51.1
Sp7g01300 Schrenkiella parvula HOM05D007773 ORTHO05D010097 9.3e-76 288.9 307 52.8
BcaC01g01702 Brassica carinata HOM05D007773 ORTHO05D010097 6.7e-74 282.7 415 42.2
THA.LOC104805981 Tarenaya hassleriana HOM05D007773 ORTHO05D010097 3.3e-73 280.4 624 33.8
AT4G09440 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 2.7e-46 191.0 173 61.3
AT1G66060 Arabidopsis thaliana HOM05D007773 ORTHO05D018431 5.9e-30 136.7 263 34.6
BcaC02g09564 Brassica carinata HOM05D007773 ORTHO05D010097 2.3e-29 134.8 85 80.0
AT1G66000 Arabidopsis thaliana HOM05D007773 ORTHO05D018431 2.5e-28 131.3 262 33.6
AL2G23630 Arabidopsis lyrata HOM05D007773 ORTHO05D018431 1.6e-27 128.6 263 35.7
BcaC02g09562 Brassica carinata HOM05D007773 ORTHO05D010097 6.1e-27 126.7 78 80.8
BolC2t07141H Brassica oleracea HOM05D007773 ORTHO05D043183 8.3e-24 116.3 102 66.7
CARHR057940 Cardamine hirsuta HOM05D007773 ORTHO05D018431 1.1e-23 115.9 218 35.3
THA.LOC104805640 Tarenaya hassleriana HOM05D012346 ORTHO05D014859 5.4e-23 113.6 328 29.3
BcaC04g23658 Brassica carinata HOM05D007773 ORTHO05D010097 1.6e-19 102.1 102 49.0
BcaC08g44269 Brassica carinata HOM05D000001 ORTHO05D000003 1.6e-19 102.1 125 48.0
THA.LOC104805644 Tarenaya hassleriana HOM05D007773 ORTHO05D018431 3.1e-18 97.8 135 40.7
THA.LOC104805980 Tarenaya hassleriana HOM05D002675 ORTHO05D003322 3.1e-18 97.8 135 40.7
BcaB03g15294 Brassica carinata HOM05D012346 ORTHO05D014859 7.0e-15 86.7 304 29.6
A07p33120 Brassica napus HOM05D012346 ORTHO05D014859 1.2e-14 85.9 305 29.8
THA.LOC109116331 Tarenaya hassleriana HOM05D007773 ORTHO05D406984 8.6e-13 79.7 125 38.4
CARHR058090 Cardamine hirsuta HOM05D012346 ORTHO05D014859 2.1e-11 75.1 256 28.1
THA.LOC104825402 Tarenaya hassleriana HOM05D007773 ORTHO05D018431 1.5e-09 68.9 97 41.2
AT2G03010 Arabidopsis thaliana HOM05D007773 ORTHO05D008084 2.0e-09 68.6 165 27.9
AL2G23620 Arabidopsis lyrata HOM05D018003 ORTHO05D018431 2.9e-08 64.7 148 32.4
Thhalv10019694m.g Eutrema salsugineum HOM05D012346 ORTHO05D014859 3.5e-06 57.8 124 34.7


User provided reference genes

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