Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g09565 Brassica carinata HOM05D007773 ORTHO05D010097 0.0e+00 1156.0 601 100.0
C04p44190 Brassica napus HOM05D007773 ORTHO05D010097 0.0e+00 1150.6 601 99.7
BolC4t25994H Brassica oleracea HOM05D007773 ORTHO05D010097 0.0e+00 1131.7 601 97.8
A04p10560 Brassica napus HOM05D007773 ORTHO05D010097 0.0e+00 1092.8 601 93.8
BcaB06g27065 Brassica carinata HOM05D007773 ORTHO05D010097 2.2e-276 955.3 593 84.1
BraA04t16721Z Brassica rapa HOM05D007773 ORTHO05D010097 1.2e-269 932.9 661 75.8
BNapus_Darmor_BZH_scaffold_38p00830 Brassica napus HOM05D007773 ORTHO05D010097 1.5e-256 889.4 610 78.2
BraA02t05642Z Brassica rapa HOM05D007773 ORTHO05D010097 2.6e-256 888.6 610 78.2
BcaB06g27068 Brassica carinata HOM05D007773 ORTHO05D010097 1.5e-240 836.3 593 75.4
BcaC02g09567 Brassica carinata HOM05D007773 ORTHO05D010097 9.6e-235 817.0 597 73.0
C04p44210 Brassica napus HOM05D007773 ORTHO05D010097 9.6e-235 817.0 597 73.0
A04p10570 Brassica napus HOM05D007773 ORTHO05D010097 1.2e-234 816.6 599 72.8
BolC4t25995H Brassica oleracea HOM05D007773 ORTHO05D010097 1.5e-232 809.7 593 73.0
BcaC02g09561 Brassica carinata HOM05D007773 ORTHO05D010097 2.2e-223 779.2 424 95.8
BcaC02g09563 Brassica carinata HOM05D007773 ORTHO05D010097 1.0e-204 717.2 375 98.9
Sp7g04910 Schrenkiella parvula HOM05D007773 ORTHO05D010097 5.9e-200 701.4 596 61.6
Thhalv10027691m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 7.4e-195 684.5 603 59.7
Thhalv10027695m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 2.8e-178 629.4 601 57.7
CARHR215610 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.4e-177 627.1 609 56.2
AL7G46160 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 7.2e-174 614.8 610 55.1
Carub.0007s3259 Capsella rubella HOM05D007773 ORTHO05D010097 8.0e-173 611.3 611 55.3
Carub.0007s3260 Capsella rubella HOM05D007773 ORTHO05D010097 1.4e-172 610.5 606 53.8
AT5G37460 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 9.7e-171 604.4 611 55.6
AL7G46150 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.3e-170 604.0 606 56.3
AT5G37470 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 3.7e-170 602.4 608 55.1
CARHR215560 Cardamine hirsuta HOM05D007773 ORTHO05D010097 5.5e-166 588.6 590 55.6
CARHR215570 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.5e-163 580.5 595 55.3
Carub.0007s3255 Capsella rubella HOM05D007773 ORTHO05D010097 1.1e-161 574.3 611 53.0
CARHR215200 Cardamine hirsuta HOM05D007773 ORTHO05D010097 2.4e-161 573.2 601 54.1
AT5G37410 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 4.9e-154 548.9 614 52.4
AT5G37920 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 2.3e-151 540.0 610 50.7
CARHR215640 Cardamine hirsuta HOM05D007773 ORTHO05D010097 7.3e-150 535.0 596 51.5
AL7G46040 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 3.0e-148 529.6 611 50.9
BolC3t19574H Brassica oleracea HOM05D007773 ORTHO05D010097 1.7e-146 523.9 602 49.7
AL7G46050 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 2.2e-146 523.5 612 49.5
Carub.0007s3702 Capsella rubella HOM05D007773 ORTHO05D010097 1.2e-144 517.7 608 50.2
Sp7g04850 Schrenkiella parvula HOM05D007773 ORTHO05D010097 5.9e-144 515.4 605 48.4
C03p72760 Brassica napus HOM05D007773 ORTHO05D010097 1.0e-143 514.6 605 48.4
A08p27100 Brassica napus HOM05D007773 ORTHO05D010097 1.1e-142 511.1 605 48.9
BraA08t34655Z Brassica rapa HOM05D007773 ORTHO05D010097 1.9e-142 510.4 602 49.2
AL7G46410 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 6.2e-141 505.4 610 47.2
Thhalv10001931m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 1.4e-140 504.2 608 47.2
CARHR215220 Cardamine hirsuta HOM05D007773 ORTHO05D010097 7.5e-139 498.4 611 46.5
Aa31sc146G30 Aethionema arabicum HOM05D007773 ORTHO05D010097 1.3e-138 497.7 587 48.6
CARHR215670 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.7e-138 497.3 616 47.2
BcaB02g07854 Brassica carinata HOM05D007773 ORTHO05D010097 2.4e-137 493.4 614 48.9
AT4G16530 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 4.1e-137 492.7 580 50.7
BcaB03g12081 Brassica carinata HOM05D007773 ORTHO05D010097 6.0e-136 488.8 596 48.0
A08p00180 Brassica napus HOM05D007773 ORTHO05D010097 1.0e-135 488.0 607 48.8
BolC3t21630H Brassica oleracea HOM05D007773 ORTHO05D010097 3.9e-135 486.1 604 49.0
CARHR215650 Cardamine hirsuta HOM05D007773 ORTHO05D010097 3.9e-135 486.1 596 47.8
Carub.0007s3254 Capsella rubella HOM05D007773 ORTHO05D010097 5.0e-135 485.7 605 50.4
Sp7g04470 Schrenkiella parvula HOM05D007773 ORTHO05D010097 3.3e-134 483.0 600 45.3
C03p93320 Brassica napus HOM05D007773 ORTHO05D010097 5.6e-134 482.3 605 48.8
BraA08t32075Z Brassica rapa HOM05D007773 ORTHO05D010097 7.3e-134 481.9 607 48.3
AL7G46030 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.5e-131 474.2 633 43.4
AT5G37650 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 2.0e-131 473.8 605 46.3
CARHR215620 Cardamine hirsuta HOM05D007773 ORTHO05D010097 7.5e-131 471.9 563 50.4
AT5G37430 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 3.5e-128 463.0 612 46.1
AT5G37400 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 7.8e-128 461.8 600 45.2
Aa31LG4G11940 Aethionema arabicum HOM05D007773 ORTHO05D010097 2.5e-126 456.8 605 44.8
Carub.0007s3252 Capsella rubella HOM05D007773 ORTHO05D010097 3.1e-124 449.9 624 43.3
Carub.0007s3280 Capsella rubella HOM05D007773 ORTHO05D010097 3.1e-124 449.9 606 45.0
Thhalv10017892m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 4.0e-124 449.5 597 46.1
Thhalv10027424m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 2.9e-122 443.4 601 47.3
BcaB05g24027 Brassica carinata HOM05D007773 ORTHO05D010097 1.4e-121 441.0 582 46.9
Sp4g15990 Schrenkiella parvula HOM05D007773 ORTHO05D010097 3.0e-111 406.8 599 42.7
AT5G37420 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 4.8e-109 399.4 608 42.3
AL7G38360 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 6.0e-96 355.9 381 53.5
AL7G38390 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 6.0e-96 355.9 381 53.5
Sp7g01300 Schrenkiella parvula HOM05D007773 ORTHO05D010097 1.2e-83 315.1 299 57.5
BcaC01g01702 Brassica carinata HOM05D007773 ORTHO05D010097 8.8e-79 298.9 420 43.6
THA.LOC104805981 Tarenaya hassleriana HOM05D007773 ORTHO05D010097 1.2e-67 261.9 628 32.6
BcaC02g09564 Brassica carinata HOM05D007773 ORTHO05D010097 6.1e-48 196.4 102 100.0
AT4G09440 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 2.0e-46 191.4 175 62.3
BcaC02g09562 Brassica carinata HOM05D007773 ORTHO05D010097 1.5e-41 175.3 90 100.0
BolC2t07141H Brassica oleracea HOM05D007773 ORTHO05D043183 6.3e-37 159.8 102 83.3
AT1G66060 Arabidopsis thaliana HOM05D007773 ORTHO05D018431 4.4e-30 137.1 257 36.2
AT1G66000 Arabidopsis thaliana HOM05D007773 ORTHO05D018431 7.5e-30 136.3 259 35.9
AL2G23630 Arabidopsis lyrata HOM05D007773 ORTHO05D018431 1.7e-26 125.2 270 36.3
CARHR057940 Cardamine hirsuta HOM05D007773 ORTHO05D018431 1.1e-23 115.9 213 34.7
BcaC04g23658 Brassica carinata HOM05D007773 ORTHO05D010097 1.2e-22 112.5 102 54.9
THA.LOC104805640 Tarenaya hassleriana HOM05D012346 ORTHO05D014859 2.2e-21 108.2 302 30.5
THA.LOC104805980 Tarenaya hassleriana HOM05D002675 ORTHO05D003322 3.7e-21 107.5 172 40.1
THA.LOC104805644 Tarenaya hassleriana HOM05D007773 ORTHO05D018431 3.2e-20 104.4 151 40.4
BcaC08g44269 Brassica carinata HOM05D000001 ORTHO05D000003 2.1e-19 101.7 84 63.1
Sp5g21170 Schrenkiella parvula HOM05D012346 ORTHO05D014859 8.9e-15 86.3 314 29.9
AL2G23710 Arabidopsis lyrata HOM05D012346 ORTHO05D014859 2.9e-13 81.3 303 29.4
A07p33120 Brassica napus HOM05D012346 ORTHO05D014859 9.2e-12 76.3 305 29.8
AT2G03010 Arabidopsis thaliana HOM05D007773 ORTHO05D008084 1.6e-11 75.5 159 32.1
THA.LOC104825402 Tarenaya hassleriana HOM05D007773 ORTHO05D018431 4.6e-11 73.9 97 46.4
CARHR058090 Cardamine hirsuta HOM05D012346 ORTHO05D014859 1.3e-10 72.4 251 27.1
THA.LOC109116331 Tarenaya hassleriana HOM05D007773 ORTHO05D406984 2.3e-10 71.6 125 36.8
CARHR215680 Cardamine hirsuta HOM05D007773 ORTHO05D043183 1.5e-09 68.9 80 51.2
AL2G23620 Arabidopsis lyrata HOM05D018003 ORTHO05D018431 2.1e-08 65.1 155 36.8
TWI34G1671 Tripterygium wilfordii HOM05D000846 ORTHO05D001340 2.1e-08 65.1 242 29.3


User provided reference genes

Program Settings