Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g09564 Brassica carinata HOM05D007773 ORTHO05D010097 1.8e-48 195.7 102 100.0
BcaC02g09565 Brassica carinata HOM05D007773 ORTHO05D010097 1.8e-48 195.7 102 100.0
C04p44190 Brassica napus HOM05D007773 ORTHO05D010097 1.8e-48 195.7 102 100.0
BolC4t25994H Brassica oleracea HOM05D007773 ORTHO05D010097 5.2e-48 194.1 102 99.0
A04p10560 Brassica napus HOM05D007773 ORTHO05D010097 5.3e-45 184.1 102 92.2
BcaC02g09562 Brassica carinata HOM05D007773 ORTHO05D010097 1.9e-42 175.6 90 100.0
BcaB06g27065 Brassica carinata HOM05D007773 ORTHO05D010097 9.1e-37 156.8 94 86.2
BNapus_Darmor_BZH_scaffold_38p00830 Brassica napus HOM05D007773 ORTHO05D010097 1.3e-35 152.9 97 79.4
BraA02t05642Z Brassica rapa HOM05D007773 ORTHO05D010097 1.3e-35 152.9 97 79.4
Sp7g04910 Schrenkiella parvula HOM05D007773 ORTHO05D010097 3.0e-32 141.7 88 79.5
BcaB06g27068 Brassica carinata HOM05D007773 ORTHO05D010097 1.2e-31 139.8 85 83.5
BcaC02g09567 Brassica carinata HOM05D007773 ORTHO05D010097 2.2e-30 135.6 85 80.0
C04p44210 Brassica napus HOM05D007773 ORTHO05D010097 2.2e-30 135.6 85 80.0
A04p10570 Brassica napus HOM05D007773 ORTHO05D010097 3.7e-30 134.8 85 81.2
BraA04t16721Z Brassica rapa HOM05D007773 ORTHO05D010097 3.7e-30 134.8 85 81.2
BolC4t25995H Brassica oleracea HOM05D007773 ORTHO05D010097 1.8e-29 132.5 85 78.8
Thhalv10027695m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 3.1e-29 131.7 93 71.0
Sp7g04850 Schrenkiella parvula HOM05D007773 ORTHO05D010097 9.1e-29 130.2 95 69.5
Carub.0007s3255 Capsella rubella HOM05D007773 ORTHO05D010097 1.6e-28 129.4 97 67.0
BcaB02g07854 Brassica carinata HOM05D007773 ORTHO05D010097 2.7e-28 128.6 96 67.7
Carub.0007s3259 Capsella rubella HOM05D007773 ORTHO05D010097 4.5e-28 127.9 97 66.0
BcaB03g12081 Brassica carinata HOM05D007773 ORTHO05D010097 5.9e-28 127.5 87 73.6
AL7G46160 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 7.7e-28 127.1 100 64.0
AT5G37920 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.0e-27 126.7 96 63.5
AL7G46150 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.7e-27 125.9 97 64.9
A08p27100 Brassica napus HOM05D007773 ORTHO05D010097 1.7e-27 125.9 95 67.4
BraA08t34655Z Brassica rapa HOM05D007773 ORTHO05D010097 1.7e-27 125.9 95 67.4
BolC3t19574H Brassica oleracea HOM05D007773 ORTHO05D010097 3.8e-27 124.8 95 66.3
Thhalv10027691m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 3.8e-27 124.8 95 67.4
AT5G37420 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.1e-26 123.2 99 65.7
C03p72760 Brassica napus HOM05D007773 ORTHO05D010097 1.9e-26 122.5 95 65.3
CARHR215200 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.9e-26 122.5 100 61.0
AL7G46410 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 4.2e-26 121.3 96 66.7
AL7G38360 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.2e-25 119.8 100 59.0
AL7G38390 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.2e-25 119.8 100 59.0
AT5G37460 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.2e-25 119.8 97 62.9
Carub.0007s3280 Capsella rubella HOM05D007773 ORTHO05D010097 1.2e-25 119.8 96 63.5
Thhalv10001931m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 1.6e-25 119.4 96 63.5
AT5G37430 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 2.8e-25 118.6 94 61.7
AT5G37470 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 3.6e-25 118.2 100 61.0
AL7G46050 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 8.0e-25 117.1 96 61.5
CARHR215220 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.0e-24 116.7 96 63.5
CARHR215610 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.4e-24 116.3 93 62.4
AT5G37410 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.8e-24 115.9 96 61.5
AL7G46040 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 3.0e-24 115.2 97 56.7
Carub.0007s3254 Capsella rubella HOM05D007773 ORTHO05D010097 3.0e-24 115.2 99 64.6
Carub.0007s3260 Capsella rubella HOM05D007773 ORTHO05D010097 3.0e-24 115.2 100 59.0
Carub.0007s3702 Capsella rubella HOM05D007773 ORTHO05D010097 4.0e-24 114.8 96 60.4
CARHR215570 Cardamine hirsuta HOM05D007773 ORTHO05D010097 5.2e-24 114.4 81 69.1
CARHR215640 Cardamine hirsuta HOM05D007773 ORTHO05D010097 8.9e-24 113.6 94 61.7
AT5G37650 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.2e-23 113.2 96 64.6
Aa31sc146G30 Aethionema arabicum HOM05D007773 ORTHO05D010097 2.6e-23 112.1 85 65.9
C03p93320 Brassica napus HOM05D007773 ORTHO05D010097 1.3e-22 109.8 87 64.4
BolC3t21630H Brassica oleracea HOM05D007773 ORTHO05D010097 1.3e-22 109.8 87 64.4
BraA08t32075Z Brassica rapa HOM05D007773 ORTHO05D010097 1.4e-21 106.3 87 63.2
CARHR215560 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.4e-21 106.3 85 64.7
A08p00180 Brassica napus HOM05D007773 ORTHO05D010097 4.1e-21 104.8 87 62.1
CARHR215620 Cardamine hirsuta HOM05D007773 ORTHO05D010097 3.5e-20 101.7 100 58.0
Sp7g04470 Schrenkiella parvula HOM05D007773 ORTHO05D010097 3.5e-20 101.7 85 60.0
BcaC08g44269 Brassica carinata HOM05D000001 ORTHO05D000003 4.5e-20 101.3 84 63.1
AL7G46030 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 5.0e-19 97.8 96 55.2
Aa31LG4G11940 Aethionema arabicum HOM05D007773 ORTHO05D010097 6.6e-19 97.4 93 53.8
Thhalv10027424m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 4.7e-17 91.3 86 52.3
CARHR215650 Cardamine hirsuta HOM05D007773 ORTHO05D010097 8.0e-17 90.5 96 52.1
Carub.0007s3252 Capsella rubella HOM05D007773 ORTHO05D010097 1.4e-16 89.7 91 53.8
Sp4g15990 Schrenkiella parvula HOM05D007773 ORTHO05D010097 3.0e-16 88.6 86 48.8
AT5G37400 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 5.2e-16 87.8 81 55.6
AT4G16530 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 2.0e-15 85.9 66 62.1
BcaB05g24027 Brassica carinata HOM05D007773 ORTHO05D010097 2.0e-15 85.9 69 65.2
Thhalv10017892m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 4.9e-14 81.3 89 46.1
CARHR215670 Cardamine hirsuta HOM05D007773 ORTHO05D010097 3.2e-13 78.6 97 46.4
THA.LOC104805981 Tarenaya hassleriana HOM05D007773 ORTHO05D010097 2.0e-12 75.9 73 49.3
THA.LOC104805644 Tarenaya hassleriana HOM05D007773 ORTHO05D018431 2.7e-12 75.5 96 40.6
THA.LOC104805980 Tarenaya hassleriana HOM05D002675 ORTHO05D003322 2.7e-12 75.5 96 40.6
AT4G09440 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 3.1e-08 62.0 48 66.7


User provided reference genes

Program Settings