Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g09563 Brassica carinata HOM05D007773 ORTHO05D010097 3.6e-211 738.0 383 100.0
BcaC02g09561 Brassica carinata HOM05D007773 ORTHO05D010097 5.0e-205 717.6 375 98.9
BcaC02g09565 Brassica carinata HOM05D007773 ORTHO05D010097 5.0e-205 717.6 375 98.9
C04p44190 Brassica napus HOM05D007773 ORTHO05D010097 4.3e-204 714.5 375 98.7
BolC4t25994H Brassica oleracea HOM05D007773 ORTHO05D010097 4.1e-199 698.0 375 96.0
A04p10560 Brassica napus HOM05D007773 ORTHO05D010097 7.5e-193 677.2 375 92.5
BraA04t16721Z Brassica rapa HOM05D007773 ORTHO05D010097 9.9e-169 597.0 445 72.6
BcaB06g27065 Brassica carinata HOM05D007773 ORTHO05D010097 3.2e-167 592.0 379 81.5
BNapus_Darmor_BZH_scaffold_38p00830 Brassica napus HOM05D007773 ORTHO05D010097 8.4e-152 540.8 382 76.7
BraA02t05642Z Brassica rapa HOM05D007773 ORTHO05D010097 1.4e-151 540.0 382 76.7
A04p10570 Brassica napus HOM05D007773 ORTHO05D010097 1.7e-144 516.5 379 70.7
BcaB06g27068 Brassica carinata HOM05D007773 ORTHO05D010097 1.1e-143 513.8 375 72.8
BolC4t25995H Brassica oleracea HOM05D007773 ORTHO05D010097 2.5e-143 512.7 379 71.2
BcaC02g09567 Brassica carinata HOM05D007773 ORTHO05D010097 1.6e-142 510.0 379 71.0
C04p44210 Brassica napus HOM05D007773 ORTHO05D010097 1.6e-142 510.0 379 71.0
Thhalv10027691m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 1.8e-114 416.8 381 57.2
Sp7g04910 Schrenkiella parvula HOM05D007773 ORTHO05D010097 3.8e-112 409.1 386 57.0
CARHR215610 Cardamine hirsuta HOM05D007773 ORTHO05D010097 8.8e-101 371.3 389 51.4
Carub.0007s3260 Capsella rubella HOM05D007773 ORTHO05D010097 9.8e-100 367.9 384 50.3
Carub.0007s3259 Capsella rubella HOM05D007773 ORTHO05D010097 4.5e-97 359.0 389 52.4
CARHR215570 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.0e-96 357.8 383 52.2
Thhalv10027695m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 1.7e-96 357.1 381 52.0
CARHR215560 Cardamine hirsuta HOM05D007773 ORTHO05D010097 2.3e-96 356.7 381 51.7
AL7G46160 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 8.6e-96 354.8 386 50.3
AT5G37460 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.6e-94 350.5 392 51.5
AL7G46150 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.2e-92 344.4 387 51.4
AT5G37470 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.5e-92 344.0 384 50.0
CARHR215200 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.6e-86 323.9 386 49.5
AT5G37410 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 3.1e-85 319.7 387 50.1
Carub.0007s3255 Capsella rubella HOM05D007773 ORTHO05D010097 3.7e-83 312.8 387 47.0
CARHR215640 Cardamine hirsuta HOM05D007773 ORTHO05D010097 8.3e-83 311.6 387 47.3
AT5G37430 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 2.4e-82 310.1 389 47.6
CARHR215670 Cardamine hirsuta HOM05D007773 ORTHO05D010097 4.6e-81 305.8 390 43.8
AL7G46040 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.0e-80 304.7 383 48.8
AT5G37920 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.7e-80 303.9 386 46.4
AL7G46050 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 6.6e-80 302.0 387 47.3
Aa31sc146G30 Aethionema arabicum HOM05D007773 ORTHO05D010097 8.1e-78 295.0 385 44.7
Carub.0007s3702 Capsella rubella HOM05D007773 ORTHO05D010097 6.8e-77 292.0 388 46.4
BolC3t21630H Brassica oleracea HOM05D007773 ORTHO05D010097 4.4e-76 289.3 389 46.0
AT4G16530 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.7e-75 287.3 390 46.4
C03p93320 Brassica napus HOM05D007773 ORTHO05D010097 6.4e-75 285.4 390 45.6
CARHR215620 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.6e-73 280.8 382 45.5
Aa31LG4G11940 Aethionema arabicum HOM05D007773 ORTHO05D010097 4.6e-73 279.3 380 42.9
CARHR215650 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.0e-72 278.1 385 42.3
A08p00180 Brassica napus HOM05D007773 ORTHO05D010097 1.7e-72 277.3 390 45.1
BraA08t32075Z Brassica rapa HOM05D007773 ORTHO05D010097 3.0e-72 276.6 390 44.9
Sp7g04850 Schrenkiella parvula HOM05D007773 ORTHO05D010097 5.1e-72 275.8 383 41.3
CARHR215220 Cardamine hirsuta HOM05D007773 ORTHO05D010097 4.7e-70 269.2 392 39.5
Thhalv10017892m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 8.1e-70 268.5 387 44.2
BolC3t19574H Brassica oleracea HOM05D007773 ORTHO05D010097 3.1e-69 266.5 384 40.9
Sp7g04470 Schrenkiella parvula HOM05D007773 ORTHO05D010097 6.8e-69 265.4 388 39.9
Carub.0007s3254 Capsella rubella HOM05D007773 ORTHO05D010097 8.9e-69 265.0 387 45.7
Sp7g01300 Schrenkiella parvula HOM05D007773 ORTHO05D010097 1.5e-68 264.2 242 58.3
Carub.0007s3252 Capsella rubella HOM05D007773 ORTHO05D010097 7.6e-68 261.9 391 39.1
BcaB02g07854 Brassica carinata HOM05D007773 ORTHO05D010097 9.9e-68 261.5 389 43.7
C03p72760 Brassica napus HOM05D007773 ORTHO05D010097 1.3e-67 261.2 384 39.6
Thhalv10001931m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 1.3e-67 261.2 387 39.3
AL7G46410 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 2.9e-67 260.0 389 39.1
AL7G46030 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 5.4e-66 255.8 414 36.7
BcaB03g12081 Brassica carinata HOM05D007773 ORTHO05D010097 5.4e-66 255.8 386 39.4
AT5G37400 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 9.2e-66 255.0 392 40.1
Thhalv10027424m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 1.6e-65 254.2 386 44.3
BraA08t34655Z Brassica rapa HOM05D007773 ORTHO05D010097 2.1e-65 253.8 384 40.1
AT5G37650 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 2.7e-65 253.4 389 39.6
A08p27100 Brassica napus HOM05D007773 ORTHO05D010097 6.0e-65 252.3 384 39.8
AT5G37420 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 2.4e-61 240.4 344 43.3
BcaB05g24027 Brassica carinata HOM05D007773 ORTHO05D010097 4.0e-61 239.6 383 39.7
BcaC01g01702 Brassica carinata HOM05D007773 ORTHO05D010097 2.2e-59 233.8 354 40.4
Sp4g15990 Schrenkiella parvula HOM05D007773 ORTHO05D010097 4.9e-59 232.6 384 39.3
Carub.0007s3280 Capsella rubella HOM05D007773 ORTHO05D010097 3.3e-55 219.9 387 37.5
AL7G38360 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 3.3e-39 166.8 220 47.3
AL7G38390 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 3.3e-39 166.8 220 47.3
THA.LOC104805981 Tarenaya hassleriana HOM05D007773 ORTHO05D010097 1.3e-32 144.8 422 28.9
THA.LOC104805640 Tarenaya hassleriana HOM05D012346 ORTHO05D014859 3.1e-13 80.5 240 29.2
AT2G03010 Arabidopsis thaliana HOM05D007773 ORTHO05D008084 8.5e-11 72.4 65 53.8
AL2G23710 Arabidopsis lyrata HOM05D012346 ORTHO05D014859 6.1e-09 66.2 238 28.6
A07p33120 Brassica napus HOM05D012346 ORTHO05D014859 6.1e-09 66.2 241 29.9
THA.LOC109116331 Tarenaya hassleriana HOM05D007773 ORTHO05D406984 3.9e-08 63.5 111 37.8
AT1G66060 Arabidopsis thaliana HOM05D007773 ORTHO05D018431 3.3e-07 60.5 101 36.6
AT1G66000 Arabidopsis thaliana HOM05D007773 ORTHO05D018431 9.7e-07 58.9 101 35.6
AT4G09440 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.3e-06 58.5 66 50.0
CARHR057940 Cardamine hirsuta HOM05D007773 ORTHO05D018431 1.3e-06 58.5 89 34.8
BcaC04g23658 Brassica carinata HOM05D007773 ORTHO05D010097 2.8e-06 57.4 58 43.1


User provided reference genes

Program Settings