Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g09562 Brassica carinata HOM05D007773 ORTHO05D010097 1.3e-42 176.0 90 100.0
BcaC02g09564 Brassica carinata HOM05D007773 ORTHO05D010097 1.3e-42 176.0 90 100.0
BcaC02g09565 Brassica carinata HOM05D007773 ORTHO05D010097 1.3e-42 176.0 90 100.0
C04p44190 Brassica napus HOM05D007773 ORTHO05D010097 1.3e-42 176.0 90 100.0
BolC4t25994H Brassica oleracea HOM05D007773 ORTHO05D010097 3.7e-42 174.5 90 98.9
A04p10560 Brassica napus HOM05D007773 ORTHO05D010097 1.7e-39 165.6 90 92.2
BNapus_Darmor_BZH_scaffold_38p00830 Brassica napus HOM05D007773 ORTHO05D010097 4.9e-34 147.5 90 81.1
BraA02t05642Z Brassica rapa HOM05D007773 ORTHO05D010097 4.9e-34 147.5 90 81.1
BcaB06g27065 Brassica carinata HOM05D007773 ORTHO05D010097 7.0e-33 143.7 82 89.0
Sp7g04910 Schrenkiella parvula HOM05D007773 ORTHO05D010097 3.3e-30 134.8 81 81.5
BcaB06g27068 Brassica carinata HOM05D007773 ORTHO05D010097 1.6e-29 132.5 78 84.6
BcaC02g09567 Brassica carinata HOM05D007773 ORTHO05D010097 3.1e-28 128.3 78 80.8
C04p44210 Brassica napus HOM05D007773 ORTHO05D010097 3.1e-28 128.3 78 80.8
A04p10570 Brassica napus HOM05D007773 ORTHO05D010097 5.2e-28 127.5 78 82.1
BraA04t16721Z Brassica rapa HOM05D007773 ORTHO05D010097 5.2e-28 127.5 78 82.1
Thhalv10027695m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 1.2e-27 126.3 85 72.9
BolC4t25995H Brassica oleracea HOM05D007773 ORTHO05D010097 2.6e-27 125.2 78 79.5
Sp7g04850 Schrenkiella parvula HOM05D007773 ORTHO05D010097 5.8e-27 124.0 88 69.3
BcaB02g07854 Brassica carinata HOM05D007773 ORTHO05D010097 1.7e-26 122.5 89 67.4
Carub.0007s3255 Capsella rubella HOM05D007773 ORTHO05D010097 4.9e-26 120.9 89 66.3
Carub.0007s3259 Capsella rubella HOM05D007773 ORTHO05D010097 6.4e-26 120.6 89 66.3
AL7G46150 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.1e-25 119.8 89 66.3
AT5G37920 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.1e-25 119.8 89 62.9
AL7G46160 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 2.4e-25 118.6 89 66.3
A08p27100 Brassica napus HOM05D007773 ORTHO05D010097 3.2e-25 118.2 85 69.4
BraA08t34655Z Brassica rapa HOM05D007773 ORTHO05D010097 3.2e-25 118.2 85 69.4
AT5G37420 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 4.1e-25 117.9 91 67.0
Thhalv10027691m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 4.1e-25 117.9 87 67.8
BolC3t19574H Brassica oleracea HOM05D007773 ORTHO05D010097 7.1e-25 117.1 85 68.2
BcaB03g12081 Brassica carinata HOM05D007773 ORTHO05D010097 2.7e-24 115.2 75 76.0
CARHR215200 Cardamine hirsuta HOM05D007773 ORTHO05D010097 2.7e-24 115.2 89 64.0
C03p72760 Brassica napus HOM05D007773 ORTHO05D010097 3.5e-24 114.8 85 67.1
AL7G46410 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 4.6e-24 114.4 89 66.3
Thhalv10001931m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 4.6e-24 114.4 89 64.0
AT5G37430 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.0e-23 113.2 89 60.7
Carub.0007s3280 Capsella rubella HOM05D007773 ORTHO05D010097 1.3e-23 112.8 89 62.9
AL7G38360 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.7e-23 112.5 89 60.7
AL7G38390 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.7e-23 112.5 89 60.7
AL7G46050 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.7e-23 112.5 90 61.1
AT5G37460 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.7e-23 112.5 89 62.9
AT5G37470 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 6.6e-23 110.5 89 62.9
CARHR215220 Cardamine hirsuta HOM05D007773 ORTHO05D010097 6.6e-23 110.5 89 64.0
AT5G37410 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 8.6e-23 110.2 89 60.7
Carub.0007s3702 Capsella rubella HOM05D007773 ORTHO05D010097 1.1e-22 109.8 89 60.7
CARHR215610 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.1e-22 109.8 85 64.7
Carub.0007s3260 Capsella rubella HOM05D007773 ORTHO05D010097 2.5e-22 108.6 89 61.8
CARHR215570 Cardamine hirsuta HOM05D007773 ORTHO05D010097 2.5e-22 108.6 76 69.7
CARHR215640 Cardamine hirsuta HOM05D007773 ORTHO05D010097 2.5e-22 108.6 85 63.5
AL7G46040 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 7.3e-22 107.1 88 55.7
AT5G37650 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 7.3e-22 107.1 89 64.0
Carub.0007s3254 Capsella rubella HOM05D007773 ORTHO05D010097 9.5e-22 106.7 91 63.7
Aa31sc146G30 Aethionema arabicum HOM05D007773 ORTHO05D010097 1.2e-21 106.3 78 65.4
C03p93320 Brassica napus HOM05D007773 ORTHO05D010097 2.8e-21 105.1 79 65.8
BolC3t21630H Brassica oleracea HOM05D007773 ORTHO05D010097 2.8e-21 105.1 79 65.8
BraA08t32075Z Brassica rapa HOM05D007773 ORTHO05D010097 3.1e-20 101.7 79 64.6
A08p00180 Brassica napus HOM05D007773 ORTHO05D010097 8.9e-20 100.1 79 63.3
BcaC08g44269 Brassica carinata HOM05D000001 ORTHO05D000003 5.8e-19 97.4 77 64.9
CARHR215560 Cardamine hirsuta HOM05D007773 ORTHO05D010097 7.6e-19 97.1 76 64.5
Sp7g04470 Schrenkiella parvula HOM05D007773 ORTHO05D010097 2.9e-18 95.1 78 59.0
Aa31LG4G11940 Aethionema arabicum HOM05D007773 ORTHO05D010097 4.9e-18 94.4 89 53.9
AL7G46030 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.4e-17 92.8 89 55.1
CARHR215620 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.2e-16 89.7 89 57.3
Carub.0007s3252 Capsella rubella HOM05D007773 ORTHO05D010097 2.7e-16 88.6 90 53.3
AT5G37400 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.5e-14 82.8 74 55.4
Thhalv10027424m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 1.5e-14 82.8 78 51.3
Sp4g15990 Schrenkiella parvula HOM05D007773 ORTHO05D010097 4.3e-14 81.3 79 46.8
BcaB05g24027 Brassica carinata HOM05D007773 ORTHO05D010097 9.6e-14 80.1 62 64.5
AT4G16530 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 3.6e-13 78.2 55 65.5
CARHR215650 Cardamine hirsuta HOM05D007773 ORTHO05D010097 3.6e-13 78.2 85 50.6
THA.LOC104805981 Tarenaya hassleriana HOM05D007773 ORTHO05D010097 1.1e-12 76.6 73 49.3
CARHR215670 Cardamine hirsuta HOM05D007773 ORTHO05D010097 2.4e-12 75.5 89 48.3
THA.LOC104805644 Tarenaya hassleriana HOM05D007773 ORTHO05D018431 2.4e-12 75.5 89 41.6
THA.LOC104805980 Tarenaya hassleriana HOM05D002675 ORTHO05D003322 2.4e-12 75.5 89 41.6
Thhalv10017892m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 6.9e-12 73.9 81 44.4


User provided reference genes

Program Settings