Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g09561 Brassica carinata HOM05D007773 ORTHO05D010097 2.0e-253 878.6 443 100.0
BcaC02g09565 Brassica carinata HOM05D007773 ORTHO05D010097 1.2e-223 779.6 424 95.8
C04p44190 Brassica napus HOM05D007773 ORTHO05D010097 1.1e-222 776.5 424 95.5
BolC4t25994H Brassica oleracea HOM05D007773 ORTHO05D010097 8.7e-217 756.9 424 92.9
A04p10560 Brassica napus HOM05D007773 ORTHO05D010097 1.9e-211 739.2 424 90.1
BcaC02g09563 Brassica carinata HOM05D007773 ORTHO05D010097 7.6e-205 717.2 375 98.9
BcaB06g27065 Brassica carinata HOM05D007773 ORTHO05D010097 1.1e-184 650.2 405 83.5
BraA04t16721Z Brassica rapa HOM05D007773 ORTHO05D010097 6.3e-183 644.4 471 73.5
BNapus_Darmor_BZH_scaffold_38p00830 Brassica napus HOM05D007773 ORTHO05D010097 7.7e-165 584.3 439 72.9
BraA02t05642Z Brassica rapa HOM05D007773 ORTHO05D010097 1.3e-164 583.6 439 72.9
A04p10570 Brassica napus HOM05D007773 ORTHO05D010097 1.1e-158 563.9 405 71.9
BcaB06g27068 Brassica carinata HOM05D007773 ORTHO05D010097 2.4e-158 562.8 401 74.3
BcaC02g09567 Brassica carinata HOM05D007773 ORTHO05D010097 1.0e-156 557.4 405 72.1
C04p44210 Brassica napus HOM05D007773 ORTHO05D010097 1.0e-156 557.4 405 72.1
BolC4t25995H Brassica oleracea HOM05D007773 ORTHO05D010097 1.3e-156 557.0 405 72.1
Thhalv10027691m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 1.7e-127 460.3 431 56.6
Sp7g04910 Schrenkiella parvula HOM05D007773 ORTHO05D010097 5.0e-124 448.7 436 55.7
CARHR215610 Cardamine hirsuta HOM05D007773 ORTHO05D010097 5.2e-113 412.1 447 51.0
Carub.0007s3260 Capsella rubella HOM05D007773 ORTHO05D010097 1.2e-109 401.0 434 50.0
Carub.0007s3259 Capsella rubella HOM05D007773 ORTHO05D010097 1.3e-108 397.5 416 53.6
Thhalv10027695m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 2.5e-107 393.3 407 53.6
CARHR215560 Cardamine hirsuta HOM05D007773 ORTHO05D010097 9.6e-107 391.3 406 53.4
AT5G37460 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.1e-105 387.9 419 52.7
CARHR215570 Cardamine hirsuta HOM05D007773 ORTHO05D010097 2.4e-105 386.7 409 53.3
AL7G46160 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.2e-104 384.4 411 51.6
AL7G46150 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 3.4e-104 382.9 437 50.8
AT5G37470 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.9e-102 377.1 434 49.3
CARHR215200 Cardamine hirsuta HOM05D007773 ORTHO05D010097 8.1e-98 361.7 436 49.8
Carub.0007s3255 Capsella rubella HOM05D007773 ORTHO05D010097 6.4e-95 352.1 414 49.0
AT5G37410 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 9.3e-94 348.2 412 51.5
CARHR215640 Cardamine hirsuta HOM05D007773 ORTHO05D010097 4.6e-93 345.9 412 49.3
CARHR215670 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.1e-91 341.3 417 45.8
AT5G37920 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.3e-90 337.8 411 48.2
AT5G37430 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 4.0e-89 332.8 405 49.1
AL7G46050 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 9.0e-89 331.6 412 48.3
AL7G46040 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 2.6e-88 330.1 413 49.2
Aa31sc146G30 Aethionema arabicum HOM05D007773 ORTHO05D010097 1.9e-86 323.9 410 46.6
BolC3t21630H Brassica oleracea HOM05D007773 ORTHO05D010097 1.2e-85 321.2 437 45.5
Carub.0007s3702 Capsella rubella HOM05D007773 ORTHO05D010097 1.2e-85 321.2 413 47.7
CARHR215620 Cardamine hirsuta HOM05D007773 ORTHO05D010097 2.7e-85 320.1 432 45.6
AT4G16530 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.8e-84 317.4 415 48.0
C03p93320 Brassica napus HOM05D007773 ORTHO05D010097 1.8e-84 317.4 438 45.2
A08p00180 Brassica napus HOM05D007773 ORTHO05D010097 3.3e-83 313.2 416 46.9
CARHR215650 Cardamine hirsuta HOM05D007773 ORTHO05D010097 5.6e-83 312.4 410 44.4
Sp7g04850 Schrenkiella parvula HOM05D007773 ORTHO05D010097 5.6e-83 312.4 409 43.5
BraA08t32075Z Brassica rapa HOM05D007773 ORTHO05D010097 6.9e-81 305.4 416 45.9
CARHR215220 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.3e-79 301.2 442 40.0
Aa31LG4G11940 Aethionema arabicum HOM05D007773 ORTHO05D010097 3.8e-79 299.7 430 41.9
BcaB02g07854 Brassica carinata HOM05D007773 ORTHO05D010097 9.3e-78 295.0 434 44.5
BolC3t19574H Brassica oleracea HOM05D007773 ORTHO05D010097 9.3e-78 295.0 409 42.8
Thhalv10017892m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 1.6e-77 294.3 414 44.2
Carub.0007s3254 Capsella rubella HOM05D007773 ORTHO05D010097 3.5e-77 293.1 412 46.8
AL7G46030 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 7.9e-77 292.0 464 37.5
BcaB03g12081 Brassica carinata HOM05D007773 ORTHO05D010097 2.3e-76 290.4 431 40.8
AL7G46410 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 3.0e-76 290.0 419 40.6
AT5G37400 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 3.9e-76 289.7 442 40.5
Carub.0007s3252 Capsella rubella HOM05D007773 ORTHO05D010097 1.5e-75 287.7 443 38.6
Sp7g04470 Schrenkiella parvula HOM05D007773 ORTHO05D010097 3.3e-75 286.6 415 40.2
Thhalv10001931m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 4.3e-75 286.2 416 40.6
AT5G37650 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 5.7e-75 285.8 419 41.3
C03p72760 Brassica napus HOM05D007773 ORTHO05D010097 5.7e-75 285.8 409 41.3
Thhalv10027424m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 8.2e-74 282.0 413 45.0
BraA08t34655Z Brassica rapa HOM05D007773 ORTHO05D010097 1.1e-73 281.6 409 42.1
A08p27100 Brassica napus HOM05D007773 ORTHO05D010097 3.1e-73 280.0 409 41.8
BcaB05g24027 Brassica carinata HOM05D007773 ORTHO05D010097 7.1e-70 268.9 411 41.6
Sp7g01300 Schrenkiella parvula HOM05D007773 ORTHO05D010097 1.8e-68 264.2 242 58.3
Sp4g15990 Schrenkiella parvula HOM05D007773 ORTHO05D010097 6.7e-68 262.3 411 40.6
Carub.0007s3280 Capsella rubella HOM05D007773 ORTHO05D010097 1.3e-63 248.1 414 39.1
AT5G37420 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 2.7e-61 240.4 344 43.3
BcaC01g01702 Brassica carinata HOM05D007773 ORTHO05D010097 2.5e-59 233.8 354 40.4
AL7G38360 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 7.7e-48 195.7 245 49.4
AL7G38390 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 7.7e-48 195.7 245 49.4
THA.LOC104805981 Tarenaya hassleriana HOM05D007773 ORTHO05D010097 4.1e-41 173.3 470 30.4
AT4G09440 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.6e-16 91.7 116 47.4
AT1G66060 Arabidopsis thaliana HOM05D007773 ORTHO05D018431 3.9e-15 87.0 140 37.9
BcaC04g23658 Brassica carinata HOM05D007773 ORTHO05D010097 8.6e-15 85.9 83 51.8
CARHR057940 Cardamine hirsuta HOM05D007773 ORTHO05D018431 5.6e-14 83.2 116 39.7
AT1G66000 Arabidopsis thaliana HOM05D007773 ORTHO05D018431 9.5e-14 82.4 134 37.3
THA.LOC104805640 Tarenaya hassleriana HOM05D012346 ORTHO05D014859 3.6e-13 80.5 240 29.2
AT2G03010 Arabidopsis thaliana HOM05D007773 ORTHO05D008084 9.8e-11 72.4 65 53.8
AL2G23630 Arabidopsis lyrata HOM05D007773 ORTHO05D018431 1.3e-10 72.0 137 38.0
THA.LOC109116331 Tarenaya hassleriana HOM05D007773 ORTHO05D406984 1.7e-10 71.6 125 36.8
AL2G23710 Arabidopsis lyrata HOM05D012346 ORTHO05D014859 7.0e-09 66.2 238 28.6
A07p33120 Brassica napus HOM05D012346 ORTHO05D014859 7.0e-09 66.2 241 29.9


User provided reference genes

Program Settings