Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g09558 Brassica carinata HOM05D004462 ORTHO05D005231 8.1e-79 297.0 146 100.0
C04p44160 Brassica napus HOM05D004462 ORTHO05D005231 4.0e-78 294.7 146 99.3
A04p10520 Brassica napus HOM05D004462 ORTHO05D005231 1.2e-77 293.1 146 98.6
BraA04t16718Z Brassica rapa HOM05D004462 ORTHO05D005231 3.5e-74 281.6 165 87.3
CARHR215890 Cardamine hirsuta HOM05D004462 ORTHO05D005231 3.9e-73 278.1 146 92.5
Sp7g05300 Schrenkiella parvula HOM05D004462 ORTHO05D005231 2.1e-71 272.3 146 90.4
Thhalv10027981m.g Eutrema salsugineum HOM05D004462 ORTHO05D005231 6.2e-71 270.8 146 89.7
BolC4t25991H Brassica oleracea HOM05D004462 ORTHO05D005231 7.6e-69 263.8 210 69.5
A06p23000 Brassica napus HOM05D004462 ORTHO05D005231 6.0e-66 254.2 146 81.5
Carub.0002s1171 Capsella rubella HOM05D004462 ORTHO05D005231 1.0e-65 253.4 146 81.5
AT1G65820 Arabidopsis thaliana HOM05D004462 ORTHO05D005231 1.3e-65 253.1 145 82.8
BcaB05g24136 Brassica carinata HOM05D004462 ORTHO05D005231 3.9e-65 251.5 146 80.8
BcaC03g14720 Brassica carinata HOM05D004462 ORTHO05D005231 6.6e-65 250.8 146 80.1
A02p13370 Brassica napus HOM05D004462 ORTHO05D005231 6.6e-65 250.8 146 80.1
C02p21630 Brassica napus HOM05D004462 ORTHO05D005231 6.6e-65 250.8 146 80.1
BcaB04g19159 Brassica carinata HOM05D004462 ORTHO05D005231 1.1e-64 250.0 146 78.1
AL2G23110 Arabidopsis lyrata HOM05D004462 ORTHO05D005231 3.3e-64 248.4 145 80.0
Sp5g20770 Schrenkiella parvula HOM05D004462 ORTHO05D005231 4.3e-64 248.1 146 79.5
Carub.0007s3236 Capsella rubella HOM05D004462 ORTHO05D005231 9.6e-64 246.9 147 84.4
BraA02t06395Z Brassica rapa HOM05D004462 ORTHO05D005231 4.8e-63 244.6 151 77.5
Eucgr.F02921 Eucalyptus grandis HOM05D004462 ORTHO05D005231 5.3e-62 241.1 141 79.4
THA.LOC104805662 Tarenaya hassleriana HOM05D004462 ORTHO05D005231 6.9e-62 240.7 146 78.8
BolC2t08300H Brassica oleracea HOM05D004462 ORTHO05D005231 9.0e-62 240.4 162 72.2
CARHR057680 Cardamine hirsuta HOM05D004462 ORTHO05D005231 9.0e-62 240.4 143 77.6
Thecc.08G108000 Theobroma cacao HOM05D004462 ORTHO05D005231 5.8e-61 237.7 140 77.1
AUR62037507 Chenopodium quinoa HOM05D004462 ORTHO05D005231 7.6e-61 237.3 140 78.6
QL02p063959 Quercus lobata HOM05D004462 ORTHO05D005231 7.6e-61 237.3 138 80.4
Cfa007736 Carpinus fangiana HOM05D004462 ORTHO05D005231 9.9e-61 236.9 138 79.7
COL.COLO4_16416 Corchorus olitorius HOM05D004462 ORTHO05D005231 1.3e-60 236.5 140 79.3
Duzib138G0229 Durio zibethinus HOM05D004462 ORTHO05D005231 1.3e-60 236.5 140 78.6
Ciclev10013005m.g Citrus clementina HOM05D004462 ORTHO05D005231 2.2e-60 235.7 140 77.1
Haze_14345 Corylus avellana HOM05D004462 ORTHO05D005231 3.8e-60 235.0 138 79.0
PGR044G0250 Punica granatum HOM05D004462 ORTHO05D005231 3.8e-60 235.0 143 77.6
Aa31LG2G2630 Aethionema arabicum HOM05D000188 ORTHO05D000362 6.4e-60 234.2 174 69.0
Sc09g0004600 Simmondsia chinensis HOM05D004462 ORTHO05D005231 1.4e-59 233.0 138 77.5
AUR62004745 Chenopodium quinoa HOM05D004462 ORTHO05D005231 1.9e-59 232.6 140 77.9
EL10Ac4g08901 Beta vulgaris HOM05D004462 ORTHO05D005231 4.2e-59 231.5 140 75.7
Gohir.A08G037800 Gossypium hirsutum HOM05D004462 ORTHO05D005231 4.2e-59 231.5 140 79.3
TWI53G1401 Tripterygium wilfordii HOM05D004462 ORTHO05D005231 5.4e-59 231.1 146 75.3
CANSAT35G0603 Cannabis sativa HOM05D004462 ORTHO05D005231 1.2e-58 229.9 143 75.5
Gohir.D08G048100 Gossypium hirsutum HOM05D004462 ORTHO05D005231 1.2e-58 229.9 140 78.6
Gorai.004G047600 Gossypium raimondii HOM05D004462 ORTHO05D005231 1.2e-58 229.9 140 78.6
Duzib128G1697 Durio zibethinus HOM05D004462 ORTHO05D005231 1.6e-58 229.6 140 75.7
Oeu002679.1 Olea europaea HOM05D004462 ORTHO05D005231 7.9e-58 227.3 142 71.8
Actinidia32995 Actinidia chinensis HOM05D004462 ORTHO05D005231 1.0e-57 226.9 139 74.8
CiPaw.04G050400 Carya illinoinensis HOM05D004462 ORTHO05D005231 1.3e-57 226.5 133 78.9
Nitab4.5_0000483g0160 Nicotiana tabacum HOM05D004462 ORTHO05D005231 1.8e-57 226.1 146 71.2
RcHm_v2.0_Chr3g0491741 Rosa chinensis HOM05D004462 ORTHO05D005231 2.3e-57 225.7 142 72.5
FvH4_1g30090 Fragaria vesca HOM05D004462 ORTHO05D005231 3.0e-57 225.3 142 71.8
FAN19G2026 Fragaria x ananassa HOM05D004462 ORTHO05D005231 3.0e-57 225.3 142 71.8
MD09G1269000 Malus domestica HOM05D004462 ORTHO05D005231 8.7e-57 223.8 139 74.1
Manes.02G082400 Manihot esculenta HOM05D004462 ORTHO05D005231 8.7e-57 223.8 138 75.4
RcHm_v2.0_Chr3g0491671 Rosa chinensis HOM05D004462 ORTHO05D005231 1.9e-56 222.6 142 71.8
Hma1.2p1_0085F.1_g043860 Hydrangea macrophylla HOM05D004462 ORTHO05D005231 2.5e-56 222.2 141 73.8
Atru.chr1.1966 Acer truncatum HOM05D004462 ORTHO05D005231 3.3e-56 221.9 139 72.7
Peaxi162Scf00344g01910 Petunia axillaris HOM05D004462 ORTHO05D005231 3.3e-56 221.9 146 69.9
Prupe.3G165500 Prunus persica HOM05D004462 ORTHO05D005231 3.3e-56 221.9 139 71.9
RcHm_v2.0_Chr3g0491701 Rosa chinensis HOM05D004462 ORTHO05D005231 3.3e-56 221.9 142 71.8
FAN23G0373 Fragaria x ananassa HOM05D004462 ORTHO05D005231 4.3e-56 221.5 142 70.4
ClCG03G008870 Citrullus lanatus HOM05D004462 ORTHO05D005231 1.3e-55 219.9 144 73.6
Gohir.A07G176700 Gossypium hirsutum HOM05D004462 ORTHO05D005231 2.1e-55 219.2 141 72.3
Gohir.D07G184000 Gossypium hirsutum HOM05D004462 ORTHO05D005231 2.8e-55 218.8 141 72.3
Gorai.001G204400 Gossypium raimondii HOM05D004462 ORTHO05D005231 2.8e-55 218.8 141 72.3
Hund06859 Selenicereus undatus HOM05D004462 ORTHO05D005231 4.8e-55 218.0 120 82.5
CsaV3_5G023890 Cucumis sativus L. HOM05D004462 ORTHO05D005231 8.1e-55 217.2 144 72.2
PGSC0003DMG400019728 Solanum tuberosum HOM05D004462 ORTHO05D005231 1.1e-54 216.9 146 67.8
MD17G1267400 Malus domestica HOM05D004462 ORTHO05D005231 1.4e-54 216.5 139 72.7
CiPaw.03G079700 Carya illinoinensis HOM05D004462 ORTHO05D005231 1.8e-54 216.1 138 76.8
PSO782G5040 Papaver somniferum HOM05D004462 ORTHO05D005231 1.8e-54 216.1 146 71.2
LjContig00141g0019021 Lotus japonicus HOM05D004462 ORTHO05D005231 2.4e-54 215.7 143 72.0
Sed0028045 Sechium edule HOM05D004462 ORTHO05D005231 2.4e-54 215.7 146 69.2
Dinv28268 Davidia involucrata HOM05D004462 ORTHO05D005231 4.0e-54 214.9 146 69.9
PSO063G2986 Papaver somniferum HOM05D004462 ORTHO05D005231 5.3e-54 214.5 146 70.5
Cpa.g.c42729 Carica papaya HOM05D004462 ORTHO05D005231 2.0e-53 212.6 121 78.5
GSVIVG01001479001 Vitis vinifera HOM05D004462 ORTHO05D005231 2.0e-53 212.6 146 70.5
Sed0009749 Sechium edule HOM05D004462 ORTHO05D005231 3.4e-53 211.8 140 71.4
Sopen02g026070 Solanum pennellii HOM05D004462 ORTHO05D005231 4.5e-53 211.5 146 66.4
MSTRG.15620 Avicennia marina HOM05D004462 ORTHO05D005231 5.8e-53 211.1 143 67.8
Potri.017G140900 Populus trichocarpa HOM05D004462 ORTHO05D005231 5.8e-53 211.1 144 68.8
CAN.G809.94 Capsicum annuum HOM05D004462 ORTHO05D005231 1.3e-52 209.9 143 66.4
Psat2g044120 Pisum sativum HOM05D004462 ORTHO05D005231 3.8e-52 208.4 139 71.2
Solyc02g081430.3 Solanum lycopersicum HOM05D004462 ORTHO05D005231 4.9e-52 208.0 146 65.1
Actinidia28772 Actinidia chinensis HOM05D004462 ORTHO05D005231 1.1e-51 206.8 146 65.8
FAN28G0360 Fragaria x ananassa HOM05D004462 ORTHO05D005231 5.5e-51 204.5 130 70.0
Nn4g24876 Nelumbo nucifera HOM05D004462 ORTHO05D005231 7.1e-51 204.1 143 67.8
Sabra17G0118400 Salix brachista HOM05D004462 ORTHO05D005231 7.1e-51 204.1 142 67.6
ATR0753G103 Amborella trichopoda HOM05D004462 ORTHO05D005231 9.3e-51 203.8 139 67.6
Lalb_Chr10g0104001 Lupinus albus HOM05D004462 ORTHO05D005231 1.6e-50 203.0 140 66.4
Aqoxy3G04063 Aquilegia oxysepala HOM05D004462 ORTHO05D005231 6.0e-50 201.1 137 70.1
arahy.Tifrunner.gnm1.ann1.TN4V22 Arachis hypogaea HOM05D004462 ORTHO05D005231 1.0e-49 200.3 139 66.9
Nn6g35012 Nelumbo nucifera HOM05D004462 ORTHO05D005231 1.0e-49 200.3 143 69.2
Nn4g24875 Nelumbo nucifera HOM05D004462 ORTHO05D005231 1.3e-49 199.9 144 64.6
Sabra04G0051800 Salix brachista HOM05D004462 ORTHO05D005231 1.8e-49 199.5 121 74.4
SalBow5G4757 Salvia bowleyana HOM05D004462 ORTHO05D005231 1.8e-49 199.5 146 63.7
HPP92_011089 Vanilla planifolia HOM05D004462 ORTHO05D005231 2.3e-49 199.1 143 62.9
vmacro18490 Vaccinium macrocarpon HOM05D004462 ORTHO05D005231 3.0e-49 198.7 146 65.8
Cc00_g30600 Coffea canephora HOM05D004462 ORTHO05D005231 5.1e-49 198.0 140 67.9
Cc02_g03200 Coffea canephora HOM05D004462 ORTHO05D005231 5.1e-49 198.0 140 67.9
Os03g0709000 Oryza sativa ssp. japonica HOM05D004462 ORTHO05D005231 5.1e-49 198.0 143 64.3
Ca_17052_v3 Cicer arietinum L. HOM05D004462 ORTHO05D005231 6.7e-49 197.6 139 64.7
DCAR_003393 Daucus carota HOM05D004462 ORTHO05D005231 1.1e-48 196.8 146 62.3
MBI12_g42585_MAGBIO Magnolia biondii HOM05D004462 ORTHO05D005231 1.5e-48 196.4 138 66.7
CDE05G2284 Ceratophyllum demersum HOM05D004462 ORTHO05D005231 1.9e-48 196.1 138 68.1
TPR.G5341 Trifolium pratense HOM05D004462 ORTHO05D005231 1.9e-48 196.1 138 67.4
HPP92_011106 Vanilla planifolia HOM05D004462 ORTHO05D005231 1.9e-48 196.1 143 62.2
Migut.K01204 Erythranthe guttata HOM05D004462 ORTHO05D005231 3.3e-48 195.3 141 64.5
Medtr5g076470 Medicago truncatula HOM05D004462 ORTHO05D005231 1.3e-47 193.4 139 66.2
MELO3C022821.2 Cucumis melo HOM05D004462 ORTHO05D005231 2.1e-47 192.6 121 76.0
CSS0041519 Camellia sinensis var. sinensis HOM05D004462 ORTHO05D005231 2.8e-47 192.2 146 63.7
DCAR_003392 Daucus carota HOM05D004462 ORTHO05D005231 8.2e-47 190.7 142 63.4
Lalb_Chr04g0251561 Lupinus albus HOM05D004462 ORTHO05D005231 1.4e-46 189.9 143 64.3
HPP92_016581 Vanilla planifolia HOM05D004462 ORTHO05D005231 3.1e-46 188.7 134 63.4
ECA238G1611 Erigeron canadensis HOM05D004462 ORTHO05D005231 4.0e-46 188.3 144 60.4
HanXRQChr12g0365631 Helianthus annuus HOM05D004462 ORTHO05D005231 6.9e-46 187.6 144 61.1
HanXRQChr14g0443511 Helianthus annuus HOM05D004462 ORTHO05D005231 1.2e-45 186.8 144 59.0
arahy.Tifrunner.gnm1.ann1.3DVS1U Arachis hypogaea HOM05D004462 ORTHO05D005231 1.5e-45 186.4 116 74.1
arahy.Tifrunner.gnm1.ann1.D1IGUM Arachis hypogaea HOM05D004462 ORTHO05D005231 1.5e-45 186.4 116 74.1
Lsat_1_v5_gn_2_72161 Lactuca sativa HOM05D004462 ORTHO05D005231 2.0e-45 186.0 138 59.4
DCAR_014136 Daucus carota HOM05D004462 ORTHO05D005231 2.6e-45 185.7 142 64.1
Lsat_1_v5_gn_2_72121 Lactuca sativa HOM05D004462 ORTHO05D005231 4.5e-45 184.9 134 61.2
CDE06G2132 Ceratophyllum demersum HOM05D004462 ORTHO05D005231 2.2e-44 182.6 138 62.3
SMO115G0120 Selaginella moellendorffii HOM05D004462 ORTHO05D005231 2.2e-44 182.6 137 63.5
PSO210G6210 Papaver somniferum HOM05D004462 ORTHO05D005231 2.9e-44 182.2 117 68.4
DCAR_003394 Daucus carota HOM05D004462 ORTHO05D005231 8.4e-44 180.6 142 58.5
MD17G1267600 Malus domestica HOM05D004462 ORTHO05D005231 1.1e-43 180.3 111 72.1
vmacro20446 Vaccinium macrocarpon HOM05D004462 ORTHO05D005231 7.1e-43 177.6 143 60.1
Zm00001eb054680 Zea mays HOM05D004462 ORTHO05D005231 3.5e-42 175.3 121 67.8
vmacro18489 Vaccinium macrocarpon HOM05D004462 ORTHO05D005231 4.6e-42 174.9 111 71.2
Rhsim08G0023100 Rhododendron simsii HOM05D004462 ORTHO05D005231 3.9e-41 171.8 117 65.8
arahy.Tifrunner.gnm1.ann1.U75ZTX Arachis hypogaea HOM05D004462 ORTHO05D005231 2.5e-40 169.1 113 67.3
Aqoxy3G04064 Aquilegia oxysepala HOM05D004462 ORTHO05D005231 2.8e-39 165.6 142 57.7
FAN26G3346 Fragaria x ananassa HOM05D004462 ORTHO05D005231 3.7e-39 165.2 98 73.5
arahy.Tifrunner.gnm1.ann1.UF2MTZ Arachis hypogaea HOM05D004462 ORTHO05D005231 1.0e-36 157.1 139 56.1
Mapoly0075s0081 Marchantia polymorpha HOM05D004462 ORTHO05D005231 6.5e-36 154.5 134 53.7
Pp3c13_5830 Physcomitrium patens HOM05D004462 ORTHO05D005231 1.3e-31 140.2 131 51.1
Pp3c13_5831 Physcomitrium patens HOM05D004462 ORTHO05D005231 1.3e-31 140.2 131 51.1
Pp3c12_2960 Physcomitrium patens HOM05D004462 ORTHO05D005231 6.3e-31 137.9 135 49.6
unitig_748.g8625 Utricularia gibba HOM05D001875 ORTHO05D002019 1.4e-27 126.7 85 68.2
CBR_g21744 Chara braunii HOM05D004462 ORTHO05D005231 3.2e-27 125.6 144 46.5
DCAR_007795 Daucus carota HOM05D004462 ORTHO05D005231 1.6e-26 123.2 99 59.6
DCAR_010504 Daucus carota HOM05D004462 ORTHO05D005231 2.1e-26 122.9 99 58.6
Pp3c13_5870 Physcomitrium patens HOM05D004462 ORTHO05D005231 1.0e-25 120.6 127 47.2
CBR_g266 Chara braunii HOM05D004462 ORTHO05D005231 3.9e-25 118.6 137 43.1
DCAR_028827 Daucus carota HOM05D000012 ORTHO05D000567 1.1e-24 117.1 88 60.2
Cre12.g559800 Chlamydomonas reinhardtii HOM05D004462 ORTHO05D005231 3.3e-24 115.5 134 47.8
C04p44040 Brassica napus HOM05D004462 ORTHO05D005231 1.7e-23 113.2 55 98.2
C04p44070 Brassica napus HOM05D004462 ORTHO05D005231 1.7e-23 113.2 55 98.2
C04p44110 Brassica napus HOM05D004462 ORTHO05D005231 1.7e-23 113.2 55 98.2
BcaC02g09555 Brassica carinata HOM05D000188 ORTHO05D005231 4.8e-23 111.7 55 96.4
AagrBONN_evm.TU.Sc2ySwM_117.1823 Anthoceros agrestis HOM05D004462 ORTHO05D005231 3.1e-22 109.0 135 40.0
HPP92_009441 Vanilla planifolia HOM05D004462 ORTHO05D005231 5.9e-21 104.8 134 37.3
Mapoly0056s0049 Marchantia polymorpha HOM05D004462 ORTHO05D005231 1.7e-20 103.2 125 43.2
CBR_g38628 Chara braunii HOM05D004462 ORTHO05D005231 3.8e-20 102.1 128 39.1
Pp3c6_29390 Physcomitrium patens HOM05D004462 ORTHO05D005231 9.4e-19 97.4 140 37.1
SMO337G0081 Selaginella moellendorffii HOM05D004462 ORTHO05D005231 2.3e-17 92.8 139 35.3
Lsat_1_v5_gn_5_96540 Lactuca sativa HOM05D004462 ORTHO05D005231 2.0e-16 89.7 99 50.5
DCAR_011767 Daucus carota HOM05D000532 ORTHO05D002414 2.2e-15 86.3 65 60.0
DCAR_006132 Daucus carota HOM05D004462 ORTHO05D005231 2.8e-15 85.9 59 64.4
GSVIVG01020320001 Vitis vinifera HOM05D004462 ORTHO05D005231 3.7e-15 85.5 54 68.5
MCO08G122 Micromonas commoda HOM05D004462 ORTHO05D005231 1.1e-14 84.0 143 36.4
MCO14G359 Micromonas commoda HOM05D004462 ORTHO05D005231 1.8e-14 83.2 112 40.2
AagrBONN_evm.TU.Sc2ySwM_228.473 Anthoceros agrestis HOM05D004462 ORTHO05D005231 1.3e-12 77.0 82 43.9
PRCOL_00004990 Prasinoderma coloniale HOM05D004462 ORTHO05D005231 1.8e-09 66.6 99 37.4
TAR371G1025 Trochodendron aralioides HOM05D004462 ORTHO05D005231 2.6e-08 62.8 49 55.1
HanXRQChr11g0343111 Helianthus annuus HOM05D004462 ORTHO05D005231 1.8e-06 56.6 41 58.5
Sabra12G0026800 Salix brachista HOM05D001043 ORTHO05D349056 1.8e-06 56.6 32 78.1


User provided reference genes

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