Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g09531 Brassica carinata HOM05D058903 ORTHO05D039078 1.7e-57 225.7 110 100.0
C04p43820 Brassica napus HOM05D058903 ORTHO05D039078 7.5e-53 210.3 112 92.9
Sp7g16480 Schrenkiella parvula HOM05D000046 ORTHO05D000667 5.1e-09 64.7 36 83.3
BcaB04g18437 Brassica carinata HOM05D000046 ORTHO05D000667 2.5e-08 62.4 36 80.6
BcaC07g38092 Brassica carinata HOM05D000046 ORTHO05D000667 2.5e-08 62.4 36 80.6
BolC8t48508H Brassica oleracea HOM05D000046 ORTHO05D000667 2.5e-08 62.4 36 80.6
Thhalv10025174m.g Eutrema salsugineum HOM05D000046 ORTHO05D000667 4.3e-08 61.6 36 80.6
A08p13280 Brassica napus HOM05D000046 ORTHO05D000667 7.3e-08 60.8 36 77.8
BraA08t33309Z Brassica rapa HOM05D000046 ORTHO05D000667 7.3e-08 60.8 36 77.8
Carub.0007s2372 Capsella rubella HOM05D000046 ORTHO05D000667 9.6e-08 60.5 35 80.0
AL7G36930 Arabidopsis lyrata HOM05D000046 ORTHO05D000667 3.6e-07 58.5 35 74.3
AT4G17660 Arabidopsis thaliana HOM05D000046 ORTHO05D000667 3.6e-07 58.5 35 74.3
CARHR224380 Cardamine hirsuta HOM05D000046 ORTHO05D000667 4.8e-07 58.2 36 72.2
AL8G11150 Arabidopsis lyrata HOM05D000046 ORTHO05D000667 4.0e-06 55.1 36 72.2
AT5G47070 Arabidopsis thaliana HOM05D000046 ORTHO05D000667 4.0e-06 55.1 36 72.2
BcaC04g21651 Brassica carinata HOM05D000046 ORTHO05D000667 4.0e-06 55.1 36 72.2
BcaC06g31418 Brassica carinata HOM05D000046 ORTHO05D000667 4.0e-06 55.1 36 72.2
A06p45290 Brassica napus HOM05D000046 ORTHO05D000667 4.0e-06 55.1 36 72.2
C09p29330 Brassica napus HOM05D000046 ORTHO05D000667 4.0e-06 55.1 36 72.2
BolC9t55800H Brassica oleracea HOM05D000046 ORTHO05D000667 4.0e-06 55.1 36 72.2
BraA06t27401Z Brassica rapa HOM05D000046 ORTHO05D000667 4.0e-06 55.1 36 72.2
Carub.0008s0075 Capsella rubella HOM05D000046 ORTHO05D000667 4.0e-06 55.1 36 72.2
BcaC06g34286 Brassica carinata HOM05D001479 ORTHO05D001401 5.3e-06 54.7 36 72.2
C07p30770 Brassica napus HOM05D000046 ORTHO05D000667 5.3e-06 54.7 36 72.2
BolC7t43620H Brassica oleracea HOM05D000046 ORTHO05D000667 5.3e-06 54.7 36 72.2
Sp2g11880 Schrenkiella parvula HOM05D000046 ORTHO05D000667 5.3e-06 54.7 36 72.2
BcaB07g30796 Brassica carinata HOM05D000046 ORTHO05D000667 6.9e-06 54.3 36 72.2
A09p22820 Brassica napus HOM05D000046 ORTHO05D000667 6.9e-06 54.3 36 72.2
BraA09t37884Z Brassica rapa HOM05D000046 ORTHO05D000667 6.9e-06 54.3 36 72.2
Thhalv10000898m.g Eutrema salsugineum HOM05D000046 ORTHO05D000667 9.0e-06 53.9 36 69.4


User provided reference genes

Program Settings