Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g09522 Brassica carinata HOM05D007456 ORTHO05D009411 4.0e-96 354.8 178 100.0
BcaC02g09523 Brassica carinata HOM05D007456 ORTHO05D009411 1.3e-49 200.3 101 100.0
BolC4t25953H Brassica oleracea HOM05D007456 ORTHO05D009411 1.3e-49 200.3 101 100.0
C04p43710 Brassica napus HOM05D007456 ORTHO05D009411 2.4e-48 196.1 100 99.0
A04p10240 Brassica napus HOM05D007456 ORTHO05D009411 3.5e-44 182.2 97 93.8
BraA04t16690Z Brassica rapa HOM05D007456 ORTHO05D009411 3.5e-44 182.2 97 93.8
BcaB06g27033 Brassica carinata HOM05D007456 ORTHO05D009411 3.0e-43 179.1 97 93.8
AT5G36300 Arabidopsis thaliana HOM05D007456 ORTHO05D009411 1.1e-42 177.2 166 59.6
Sp7g05790 Schrenkiella parvula HOM05D007456 ORTHO05D009411 4.9e-38 161.8 96 83.3
AL7G45310 Arabidopsis lyrata HOM05D007456 ORTHO05D009411 1.1e-34 150.6 94 78.7
Cpa.g.sc252.22 Carica papaya HOM05D007456 ORTHO05D009411 2.2e-33 146.4 141 54.6
Thhalv10004016m.g Eutrema salsugineum HOM05D007456 ORTHO05D009411 6.3e-33 144.8 93 80.6
ClCG07G017250 Citrullus lanatus HOM05D007456 ORTHO05D009411 3.8e-30 135.6 141 53.2
AUR62005926 Chenopodium quinoa HOM05D007456 ORTHO05D009411 7.2e-29 131.3 143 46.9
EL10Ac3g05110 Beta vulgaris HOM05D007456 ORTHO05D009411 3.0e-27 125.9 141 46.1
Peaxi162Scf00398g00211 Petunia axillaris HOM05D007456 ORTHO05D009411 9.7e-26 120.9 134 49.3
THA.LOC104823813 Tarenaya hassleriana HOM05D007456 ORTHO05D009411 2.8e-25 119.4 93 68.8
CsaV3_4G004450 Cucumis sativus L. HOM05D007456 ORTHO05D009411 6.3e-25 118.2 130 52.3
FAN03G3193 Fragaria x ananassa HOM05D007456 ORTHO05D009411 4.5e-23 112.1 116 48.3
Nitab4.5_0016432g0010 Nicotiana tabacum HOM05D007456 ORTHO05D009411 3.8e-22 109.0 125 48.0
Sed0026452 Sechium edule HOM05D007456 ORTHO05D009411 2.7e-20 102.8 116 48.3
Sopen10g030890 Solanum pennellii HOM05D007456 ORTHO05D009411 2.3e-19 99.8 116 46.6
PGSC0003DMG400023682 Solanum tuberosum HOM05D007456 ORTHO05D009411 3.0e-19 99.4 116 46.6
FAN19G0065 Fragaria x ananassa HOM05D007456 ORTHO05D009411 1.5e-18 97.1 113 46.9
Aqoxy245s001 Aquilegia oxysepala HOM05D007456 ORTHO05D009411 1.7e-17 93.6 93 46.2
Gohir.D04G076800 Gossypium hirsutum HOM05D007456 ORTHO05D009411 6.9e-16 88.2 97 50.5
Thecc.05G207800 Theobroma cacao HOM05D007456 ORTHO05D009411 1.3e-14 84.0 92 52.2
MSTRG.26940 Avicennia marina HOM05D007456 ORTHO05D009411 3.8e-14 82.4 107 43.0
Nitab4.5_0004532g0030 Nicotiana tabacum HOM05D007456 ORTHO05D009411 1.1e-13 80.9 95 48.4
CSS0006842 Camellia sinensis var. sinensis HOM05D007456 ORTHO05D009411 2.5e-13 79.7 138 36.2
Gorai.012G086600 Gossypium raimondii HOM05D007456 ORTHO05D009411 9.4e-13 77.8 90 47.8
FvH4_7g33530 Fragaria vesca HOM05D007456 ORTHO05D009411 1.6e-12 77.0 89 47.2
DCAR_010527 Daucus carota HOM05D006163 ORTHO05D007625 2.1e-12 76.6 63 60.3
Atru.BG.267.p Acer truncatum HOM05D007456 ORTHO05D009411 3.6e-12 75.9 76 53.9
Gohir.A05G338400 Gossypium hirsutum HOM05D007456 ORTHO05D009411 3.6e-12 75.9 89 47.2
FvH4_7g33490 Fragaria vesca HOM05D007456 ORTHO05D009411 6.1e-12 75.1 88 46.6
vmacro06487 Vaccinium macrocarpon HOM05D007456 ORTHO05D009411 3.0e-11 72.8 90 45.6
Oeu018668.1 Olea europaea HOM05D007456 ORTHO05D009411 1.5e-10 70.5 109 35.8
Oeu055445.1 Olea europaea HOM05D007456 ORTHO05D009411 2.6e-10 69.7 84 38.1
GSVIVG01024456001 Vitis vinifera HOM05D007456 ORTHO05D009411 4.4e-10 68.9 109 35.8
Oeu026572.1 Olea europaea HOM05D007456 ORTHO05D009411 9.7e-10 67.8 135 30.4
Actinidia02801 Actinidia chinensis HOM05D007456 ORTHO05D009411 4.1e-08 62.4 51 51.0
FvH4_1g26290 Fragaria vesca HOM05D000003 ORTHO05D010713 7.0e-08 61.6 66 47.0
ATR0661G389 Amborella trichopoda HOM05D006705 ORTHO05D008179 7.7e-07 58.2 117 33.3
RcHm_v2.0_Chr1g0383591 Rosa chinensis HOM05D007456 ORTHO05D009411 1.7e-06 57.0 88 40.9
FAN20G2687 Fragaria x ananassa HOM05D000148 ORTHO05D008179 2.2e-06 56.6 143 26.6
TAR375G0715 Trochodendron aralioides HOM05D007456 ORTHO05D009411 2.2e-06 56.6 46 60.9
TAR375G0927 Trochodendron aralioides HOM05D007456 ORTHO05D009411 2.2e-06 56.6 46 60.9
SHI25578 Sapria himalayana HOM05D007639 ORTHO05D009509 3.8e-06 55.8 167 28.1
FAN25G3795 Fragaria x ananassa HOM05D000162 ORTHO05D000090 6.5e-06 55.1 116 30.2
TWI36G0155 Tripterygium wilfordii HOM05D000001 ORTHO05D010008 6.5e-06 55.1 103 31.1


User provided reference genes

Program Settings