Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 1.8e-202 709.1 388 100.0
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 5.3e-202 707.6 388 99.2
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 6.9e-202 707.2 388 99.7
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 1.7e-200 702.6 388 96.9
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 1.7e-200 702.6 388 96.9
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 1.2e-190 669.8 386 92.7
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 3.0e-181 638.6 380 90.8
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 8.8e-181 637.1 384 90.1
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 2.5e-180 635.6 384 89.6
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 2.8e-179 632.1 378 89.4
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 4.8e-179 631.3 384 89.8
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 5.7e-172 607.8 369 88.9
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 9.4e-167 590.5 353 89.0
Aa31sc339G40 Aethionema arabicum HOM05D003970 ORTHO05D004615 1.6e-161 573.2 372 81.2
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 5.0e-160 568.2 375 82.7
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 1.9e-159 566.2 365 83.0
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 3.2e-159 565.5 358 84.9
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 3.2e-159 565.5 375 81.1
Atru.chr7.1654 Acer truncatum HOM05D003970 ORTHO05D004615 4.7e-158 561.6 361 82.8
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 1.8e-157 559.7 362 86.5
Glyma.13G107500 Glycine max HOM05D003970 ORTHO05D004615 3.0e-157 558.9 364 81.0
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 4.0e-157 558.5 370 77.6
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 4.0e-157 558.5 363 81.3
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 1.5e-156 556.6 374 81.6
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 5.7e-156 554.7 362 84.8
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 5.7e-156 554.7 385 79.2
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 1.3e-155 553.5 362 81.8
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 2.2e-155 552.7 365 80.0
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea HOM05D003970 ORTHO05D004615 4.8e-155 551.6 365 78.4
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 6.3e-155 551.2 365 80.0
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 8.2e-155 550.8 386 74.4
Eucgr.C03403 Eucalyptus grandis HOM05D003970 ORTHO05D004615 8.2e-155 550.8 388 73.5
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea HOM05D003970 ORTHO05D004615 1.1e-154 550.4 365 77.8
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 1.1e-154 550.4 388 76.0
Glyma.17G051800 Glycine max HOM05D003970 ORTHO05D004615 1.1e-154 550.4 371 78.7
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 1.8e-154 549.7 347 85.6
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 1.8e-154 549.7 362 80.9
Phvul.003G133400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 3.1e-154 548.9 365 79.2
Sed0004197 Sechium edule HOM05D003970 ORTHO05D004615 3.1e-154 548.9 385 80.3
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 4.1e-154 548.5 371 79.5
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 4.1e-154 548.5 365 81.1
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 4.1e-154 548.5 365 81.1
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 5.3e-154 548.1 387 79.3
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 7.0e-154 547.7 365 79.2
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 1.2e-153 547.0 372 80.4
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 2.7e-153 545.8 384 81.8
VMungo1215G1067 Vigna mungo HOM05D003970 ORTHO05D004615 2.7e-153 545.8 365 78.1
BcaB06g26940 Brassica carinata HOM05D003970 ORTHO05D004615 5.9e-153 544.7 380 83.2
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 5.9e-153 544.7 399 75.2
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 7.7e-153 544.3 365 80.8
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.7e-152 543.1 362 80.4
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 2.2e-152 542.7 353 85.8
Cfa003038 Carpinus fangiana HOM05D003970 ORTHO05D004615 2.2e-152 542.7 364 82.7
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 2.2e-152 542.7 366 77.6
Lj4g0010970 Lotus japonicus HOM05D003970 ORTHO05D004615 2.9e-152 542.3 366 75.7
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 3.8e-152 542.0 397 74.8
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 3.8e-152 542.0 397 74.8
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 3.8e-152 542.0 362 76.8
PGR044G0734 Punica granatum HOM05D003970 ORTHO05D004615 8.5e-152 540.8 330 81.8
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.9e-151 539.7 362 79.8
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 2.5e-151 539.3 385 77.1
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 5.5e-151 538.1 386 76.4
Aqoxy7G03992 Aquilegia oxysepala HOM05D003970 ORTHO05D004615 1.2e-150 537.0 366 77.9
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 2.7e-150 535.8 385 76.9
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 4.7e-150 535.0 365 78.4
Lalb_Chr08g0232451 Lupinus albus HOM05D003970 ORTHO05D004615 4.7e-150 535.0 363 76.3
Sabra06G0115100 Salix brachista HOM05D003970 ORTHO05D004615 6.1e-150 534.6 366 82.2
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 8.0e-150 534.3 387 73.6
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 3.0e-149 532.3 366 77.9
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 3.0e-149 532.3 387 72.9
Gohir.D06G073400 Gossypium hirsutum HOM05D003970 ORTHO05D004615 5.2e-149 531.6 306 85.6
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 5.2e-149 531.6 363 78.5
Gorai.010G085700 Gossypium raimondii HOM05D003970 ORTHO05D004615 6.8e-149 531.2 306 85.6
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 4.4e-148 528.5 366 77.9
EL10Ac8g19144 Beta vulgaris HOM05D003970 ORTHO05D004615 5.7e-148 528.1 363 79.6
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 5.7e-148 528.1 392 77.0
Gohir.A06G074600 Gossypium hirsutum HOM05D003970 ORTHO05D004615 5.7e-148 528.1 306 85.3
Psat1g133240 Pisum sativum HOM05D003970 ORTHO05D004615 7.5e-148 527.7 365 74.2
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 1.7e-147 526.6 390 74.4
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 2.2e-147 526.2 384 75.0
VMungo1309G1594 Vigna mungo HOM05D003970 ORTHO05D004615 2.8e-147 525.8 309 84.1
Lj6g0022796 Lotus japonicus HOM05D003970 ORTHO05D004615 4.8e-147 525.0 365 73.7
Glyma.15G173000 Glycine max HOM05D003970 ORTHO05D004615 1.1e-146 523.9 365 73.2
Medtr2g040600 Medicago truncatula HOM05D003970 ORTHO05D004615 1.1e-146 523.9 355 74.6
Ca_13142_v3 Cicer arietinum L. HOM05D003970 ORTHO05D004615 1.4e-146 523.5 365 74.8
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 1.4e-146 523.5 374 75.7
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 1.4e-146 523.5 368 77.2
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 1.8e-146 523.1 353 74.8
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 4.1e-146 521.9 385 78.2
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 5.4e-146 521.5 365 77.3
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 5.4e-146 521.5 371 72.0
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 1.2e-145 520.4 383 70.8
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 1.2e-145 520.4 375 71.2
CSS0040908 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 2.0e-145 519.6 383 77.0
CDE05G2698 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 3.5e-145 518.8 307 83.4
Lj4A288T21 Lonicera japonica HOM05D003970 ORTHO05D004615 3.5e-145 518.8 312 83.0
Nitab4.5_0001488g0140 Nicotiana tabacum HOM05D003970 ORTHO05D004615 3.5e-145 518.8 365 73.4
ECA234G3560 Erigeron canadensis HOM05D003970 ORTHO05D004615 4.5e-145 518.5 387 69.3
Glyma.09G067100 Glycine max HOM05D003970 ORTHO05D004615 5.9e-145 518.1 365 72.6
MBI05_g23628_MAGBIO Magnolia biondii HOM05D003970 ORTHO05D004615 1.0e-144 517.3 315 81.9
Nitab4.5_0006849g0020 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.0e-144 517.3 365 71.5
Os01g0585100 Oryza sativa ssp. japonica HOM05D003970 ORTHO05D004615 1.7e-144 516.5 314 79.9
Actinidia25226 Actinidia chinensis HOM05D003970 ORTHO05D004615 2.3e-144 516.2 375 77.9
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 2.3e-144 516.2 463 64.8
Solyc07g041160.3 Solanum lycopersicum HOM05D003970 ORTHO05D004615 5.0e-144 515.0 387 69.0
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 6.6e-144 514.6 370 71.4
Sopen07g020420 Solanum pennellii HOM05D003970 ORTHO05D004615 6.6e-144 514.6 387 68.7
vmacro17169 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 8.6e-144 514.2 365 76.2
PGSC0003DMG400020950 Solanum tuberosum HOM05D003970 ORTHO05D004615 2.5e-143 512.7 388 68.3
CAN.G33.23 Capsicum annuum HOM05D003970 ORTHO05D004615 7.2e-143 511.1 365 70.7
Actinidia39693 Actinidia chinensis HOM05D003970 ORTHO05D004615 9.5e-143 510.8 366 78.7
Phvul.009G229400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 1.0e-141 507.3 365 71.8
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 6.8e-141 504.6 361 75.3
Zm00001eb356980 Zea mays HOM05D003970 ORTHO05D004615 1.2e-140 503.8 316 77.5
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 2.6e-140 502.7 376 71.5
Peaxi162Scf00219g00019 Petunia axillaris HOM05D003970 ORTHO05D004615 7.5e-140 501.1 387 66.7
TPR.G18106 Trifolium pratense HOM05D003970 ORTHO05D004615 9.8e-140 500.7 301 81.4
Medtr4g125680 Medicago truncatula HOM05D003970 ORTHO05D004615 3.7e-139 498.8 286 83.9
Hund08710 Selenicereus undatus HOM05D003970 ORTHO05D004615 3.7e-139 498.8 376 73.7
vmacro06308 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 8.3e-139 497.7 299 79.6
TPR.G9462 Trifolium pratense HOM05D003970 ORTHO05D004615 4.5e-137 491.9 308 76.6
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea HOM05D003970 ORTHO05D004615 1.1e-135 487.3 304 79.3
ATR0051G045 Amborella trichopoda HOM05D003970 ORTHO05D004615 3.3e-135 485.7 325 76.6
ECA236G0065 Erigeron canadensis HOM05D003970 ORTHO05D004615 2.8e-134 482.6 371 66.6
HPP92_005531 Vanilla planifolia HOM05D003970 ORTHO05D004615 5.8e-132 474.9 269 84.8
HanXRQChr04g0126061 Helianthus annuus HOM05D003970 ORTHO05D004615 6.4e-131 471.5 371 67.1
Gohir.D13G197975 Gossypium hirsutum HOM05D003970 ORTHO05D004615 2.0e-129 466.5 303 82.2
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 6.6e-128 461.5 387 69.3
Oeu000306.1 Olea europaea HOM05D003970 ORTHO05D004615 3.3e-127 459.1 364 73.1
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 1.2e-126 457.2 363 70.2
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 1.1e-125 454.1 293 83.6
Zm00001eb160510 Zea mays HOM05D003970 ORTHO05D004615 1.5e-124 450.3 281 77.9
Lsat_1_v5_gn_8_86281 Lactuca sativa HOM05D003970 ORTHO05D004615 7.5e-124 448.0 398 62.1
Mapoly0061s0008 Marchantia polymorpha HOM05D003970 ORTHO05D004615 1.3e-120 437.2 302 67.5
Ah.14g085030 Amaranthus hybridus HOM05D003970 ORTHO05D004615 5.6e-119 431.8 375 65.6
unitig_26.g9177 Utricularia gibba HOM05D003970 ORTHO05D004615 1.2e-116 424.1 298 66.8
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 5.8e-116 421.8 299 69.2
SMO169G0099 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 1.7e-115 420.2 304 65.8
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 2.9e-115 419.5 400 60.0
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 3.7e-115 419.1 237 85.2
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis HOM05D003970 ORTHO05D004615 1.9e-114 416.8 321 64.2
Pp3c2_27340 Physcomitrium patens HOM05D003970 ORTHO05D004615 3.5e-113 412.5 298 65.4
Pp3c3_9180 Physcomitrium patens HOM05D003970 ORTHO05D004615 6.0e-113 411.8 298 63.8
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 2.1e-110 403.3 348 64.9
Cpa.g.sc28.103 Carica papaya HOM05D003970 ORTHO05D004615 3.6e-110 402.5 221 89.6
SMO271G0136 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 4.4e-108 395.6 313 62.0
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea HOM05D003970 ORTHO05D004615 1.0e-104 384.4 364 58.5
CSS0012417 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 3.0e-104 382.9 352 66.5
PGSC0003DMG400019544 Solanum tuberosum HOM05D003970 ORTHO05D004615 6.9e-93 345.1 234 75.2
CBR_g16039 Chara braunii HOM05D003970 ORTHO05D004615 2.2e-91 340.1 299 57.2
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis HOM05D003970 ORTHO05D004615 1.7e-83 313.9 211 68.7
PSO017G0759 Papaver somniferum HOM05D003970 ORTHO05D004615 2.4e-77 293.5 254 65.0
RcHm_v2.0_Chr1g0313941 Rosa chinensis HOM05D003970 ORTHO05D004615 4.2e-66 256.1 150 81.3
Ah.09g231260 Amaranthus hybridus HOM05D003970 ORTHO05D004615 1.4e-61 241.1 383 47.3
SEGI_24858 Sequoiadendron giganteum HOM05D003970 ORTHO05D004615 4.1e-53 213.0 180 58.9
Cc02_g26660 Coffea canephora HOM05D003970 ORTHO05D004615 7.7e-52 208.8 127 77.2
Medtr2g039830 Medicago truncatula HOM05D003970 ORTHO05D004615 1.7e-38 164.5 175 52.6
Zm00001eb362060 Zea mays HOM05D003970 ORTHO05D004615 9.8e-31 138.7 98 72.4
Cre03.g207351 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 4.5e-28 129.8 280 30.7
MCO07G676 Micromonas commoda HOM05D003970 ORTHO05D004615 1.0e-24 118.6 338 28.7
Medtr2g039840 Medicago truncatula HOM05D003970 ORTHO05D004615 2.3e-24 117.5 99 59.6
TPR.G277 Trifolium pratense HOM05D003970 ORTHO05D004615 2.3e-24 117.5 65 81.5
PRCOL_00002316 Prasinoderma coloniale HOM05D003970 ORTHO05D004615 4.1e-21 106.7 282 28.0
Nitab4.5_0003493g0050 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.2e-20 105.1 241 35.7
Zm00001eb242980 Zea mays HOM05D003970 ORTHO05D004615 1.1e-18 98.6 70 71.4
Zm00001eb304220 Zea mays HOM05D003970 ORTHO05D004615 1.1e-18 98.6 70 71.4
Zm00001eb122080 Zea mays HOM05D003970 ORTHO05D004615 9.5e-18 95.5 70 70.0
Cpa.g.sc28.102 Carica papaya HOM05D003970 ORTHO05D004615 3.6e-17 93.6 90 75.6
Cre14.g620200 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 6.1e-17 92.8 380 25.3
COL.COLO4_18145 Corchorus olitorius HOM05D003970 ORTHO05D004615 3.1e-16 90.5 78 65.4
COL.COLO4_18144 Corchorus olitorius HOM05D003970 ORTHO05D004615 2.6e-15 87.4 91 71.4
Medtr1g008180 Medicago truncatula HOM05D003970 ORTHO05D004615 2.4e-13 80.9 59 69.5
Cfa024865 Carpinus fangiana HOM05D003970 ORTHO05D124560 2.3e-11 74.3 108 36.1
RcHm_v2.0_Chr1g0340041 Rosa chinensis HOM05D003970 ORTHO05D004615 3.6e-09 67.0 33 90.9
QL02p061328 Quercus lobata HOM05D000001 ORTHO05D000003 3.4e-07 60.5 49 61.2
Cpa.g.c48203 Carica papaya HOM05D003970 ORTHO05D004615 2.9e-06 57.4 72 70.8


User provided reference genes

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