Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g09477 Brassica carinata HOM05D012395 ORTHO05D027328 3.4e-42 174.5 83 100.0
BcaC01g02046 Brassica carinata HOM05D012395 ORTHO05D020145 6.3e-28 127.1 63 93.7
C03p69200 Brassica napus HOM05D012395 ORTHO05D020145 6.3e-28 127.1 63 93.7
BolC7t42055H Brassica oleracea HOM05D012395 ORTHO05D020145 6.3e-28 127.1 63 93.7
C08p24790 Brassica napus HOM05D012395 ORTHO05D020145 1.8e-27 125.6 63 93.7
BraA05t21648Z Brassica rapa HOM05D012395 ORTHO05D020145 1.8e-27 125.6 63 93.7
C07p15660 Brassica napus HOM05D012395 ORTHO05D020145 1.5e-24 115.9 57 94.7
A08p05930 Brassica napus HOM05D012395 ORTHO05D020145 1.4e-22 109.4 56 91.1
A01p12670 Brassica napus HOM05D012395 ORTHO05D041028 7.0e-19 97.1 51 88.2
BraA01t01210Z Brassica rapa HOM05D012395 ORTHO05D027328 7.0e-19 97.1 51 88.2
BraA06t25081Z Brassica rapa HOM05D012395 ORTHO05D027328 7.0e-19 97.1 51 88.2
BraA09t38767Z Brassica rapa HOM05D012395 ORTHO05D027328 7.0e-19 97.1 51 88.2
BraA10t43440Z Brassica rapa HOM05D012395 ORTHO05D041028 7.0e-19 97.1 51 88.2
BcaB06g29471 Brassica carinata HOM05D001073 ORTHO05D002392 4.2e-08 61.2 34 79.4
C04p72440 Brassica napus HOM05D001073 ORTHO05D002392 9.4e-08 60.1 34 76.5
BcaC02g07003 Brassica carinata HOM05D001073 ORTHO05D002392 1.2e-07 59.7 29 89.7
BolC4t28730H Brassica oleracea HOM05D001632 ORTHO05D001534 1.2e-07 59.7 29 89.7
A04p34630 Brassica napus HOM05D001632 ORTHO05D001534 2.7e-07 58.5 34 73.5
BraA04t18921Z Brassica rapa HOM05D001632 ORTHO05D001534 2.7e-07 58.5 34 73.5
Thhalv10001426m.g Eutrema salsugineum HOM05D001073 ORTHO05D002392 8.0e-07 57.0 29 86.2
BcaNung03898 Brassica carinata HOM05D001073 ORTHO05D002392 1.0e-06 56.6 31 80.6
AT2G46790 Arabidopsis thaliana HOM05D001073 ORTHO05D002392 4.0e-06 54.7 29 82.8


User provided reference genes

Program Settings