Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g09475 Brassica carinata HOM05D003622 ORTHO05D004453 0.0e+00 1177.2 598 100.0
C04p43220 Brassica napus HOM05D003622 ORTHO05D004453 2.2e-308 1061.6 727 78.8
A04p09700 Brassica napus HOM05D003622 ORTHO05D004453 2.9e-300 1034.6 727 77.2
BcaB06g26937 Brassica carinata HOM05D003622 ORTHO05D004453 2.9e-292 1008.1 724 76.0
Sp7g06890 Schrenkiella parvula HOM05D003622 ORTHO05D004453 1.4e-262 909.4 725 69.5
BcaB02g08053 Brassica carinata HOM05D003622 ORTHO05D004453 7.0e-254 880.6 723 68.0
Thhalv10003437m.g Eutrema salsugineum HOM05D003622 ORTHO05D004453 1.6e-253 879.4 726 67.1
CARHR217470 Cardamine hirsuta HOM05D003622 ORTHO05D004453 1.7e-247 859.4 723 65.1
Carub.0007s3125 Capsella rubella HOM05D003622 ORTHO05D004453 6.0e-237 824.3 726 63.4
AL7G44290 Arabidopsis lyrata HOM05D003622 ORTHO05D004453 1.3e-231 806.6 727 62.6
BcaC02g09474 Brassica carinata HOM05D003622 ORTHO05D004453 2.1e-226 789.3 728 64.1
AT5G35430 Arabidopsis thaliana HOM05D003622 ORTHO05D004453 2.3e-225 785.8 726 61.7
Carub.0001s0938 Capsella rubella HOM05D003622 ORTHO05D004453 3.6e-202 708.8 724 56.9
Aa31LG9G18070 Aethionema arabicum HOM05D003622 ORTHO05D004453 6.2e-202 708.0 719 57.0
BolC4t25899H Brassica oleracea HOM05D003622 ORTHO05D004453 2.2e-183 646.4 510 70.6
THA.LOC104808966 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 1.1e-179 634.0 748 50.0
BraA04t16629Z Brassica rapa HOM05D003622 ORTHO05D004453 6.1e-165 585.1 498 66.5
THA.LOC104826553 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 1.0e-156 557.8 755 46.0
Duzib150G0473 Durio zibethinus HOM05D003622 ORTHO05D004453 6.8e-148 528.5 681 45.7
Ciclev10007427m.g Citrus clementina HOM05D003622 ORTHO05D004453 9.1e-145 518.1 794 41.2
Duzib168G1318 Durio zibethinus HOM05D003622 ORTHO05D004453 5.0e-143 512.3 793 41.4
Gohir.D13G206400 Gossypium hirsutum HOM05D003622 ORTHO05D004453 2.5e-142 510.0 684 45.0
COL.COLO4_35161 Corchorus olitorius HOM05D003622 ORTHO05D004453 6.1e-141 505.4 780 41.8
Cfa003424 Carpinus fangiana HOM05D003622 ORTHO05D004453 1.4e-140 504.2 796 40.8
Thecc.09G132400 Theobroma cacao HOM05D003622 ORTHO05D004453 2.8e-138 496.5 789 40.3
Manes.06G047000 Manihot esculenta HOM05D003622 ORTHO05D004453 4.1e-137 492.7 800 40.0
CiPaw.03G248700 Carya illinoinensis HOM05D003622 ORTHO05D004453 7.0e-137 491.9 806 39.2
GSVIVG01015594001 Vitis vinifera HOM05D003622 ORTHO05D004453 2.0e-136 490.3 763 40.5
Gorai.010G061100 Gossypium raimondii HOM05D003622 ORTHO05D004453 4.5e-136 489.2 794 41.1
Gohir.D06G052700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 2.5e-134 483.4 794 40.8
Gohir.A08G088500 Gossypium hirsutum HOM05D003622 ORTHO05D004453 5.6e-134 482.3 798 39.7
Atru.chr7.1951 Acer truncatum HOM05D003622 ORTHO05D004453 4.7e-133 479.2 715 41.8
Gorai.004G107500 Gossypium raimondii HOM05D003622 ORTHO05D004453 8.0e-133 478.4 799 39.4
TWI34G1661 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 1.4e-132 477.6 789 39.8
arahy.Tifrunner.gnm1.ann1.HD4WN1 Arachis hypogaea HOM05D003622 ORTHO05D004453 1.8e-132 477.2 788 39.0
TWI63G1810 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 1.8e-132 477.2 797 39.5
Gohir.A06G053800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 2.3e-132 476.9 801 40.4
Gorai.013G235300 Gossypium raimondii HOM05D003622 ORTHO05D004453 8.9e-132 474.9 796 39.4
TWI32G0590 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 8.9e-132 474.9 786 38.8
MELO3C010313.2 Cucumis melo HOM05D003622 ORTHO05D004453 1.5e-131 474.2 788 39.6
arahy.Tifrunner.gnm1.ann1.DJE2D0 Arachis hypogaea HOM05D003622 ORTHO05D004453 2.6e-131 473.4 786 38.8
Dinv36478 Davidia involucrata HOM05D003622 ORTHO05D004453 4.4e-131 472.6 792 38.6
Prupe.7G248800 Prunus persica HOM05D003622 ORTHO05D004453 4.4e-131 472.6 774 39.7
CsaV3_1G026740 Cucumis sativus L. HOM05D003622 ORTHO05D004453 5.7e-131 472.2 788 39.7
Manes.14G116100 Manihot esculenta HOM05D003622 ORTHO05D004453 7.5e-131 471.9 803 39.6
Potri.018G126100 Populus trichocarpa HOM05D003622 ORTHO05D004453 1.7e-130 470.7 798 39.1
Glyma.17G111200 Glycine max HOM05D003622 ORTHO05D004453 4.9e-130 469.2 792 37.6
RcHm_v2.0_Chr2g0087611 Rosa chinensis HOM05D003622 ORTHO05D004453 6.4e-130 468.8 771 39.0
Gohir.A13G200800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 8.3e-130 468.4 795 38.4
Glyma.13G160300 Glycine max HOM05D003622 ORTHO05D004453 5.4e-129 465.7 794 37.7
Sabra18G0107100 Salix brachista HOM05D003622 ORTHO05D004453 5.4e-129 465.7 798 39.2
CANSAT11G0379 Cannabis sativa HOM05D003622 ORTHO05D004453 2.7e-128 463.4 782 38.5
Potri.006G065600 Populus trichocarpa HOM05D003622 ORTHO05D004453 2.7e-128 463.4 800 38.8
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 1.3e-127 461.1 787 39.0
Gohir.D08G099700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.3e-127 461.1 771 39.7
MD02G1023300 Malus domestica HOM05D003622 ORTHO05D004453 2.3e-127 460.3 778 39.1
Lalb_Chr13g0301561 Lupinus albus HOM05D003622 ORTHO05D004453 3.3e-126 456.4 796 38.3
Lj4g0015305 Lotus japonicus HOM05D003622 ORTHO05D004453 9.5e-126 454.9 794 37.5
VMungo1215G2226 Vigna mungo HOM05D003622 ORTHO05D004453 1.6e-125 454.1 794 37.3
Sed0001481 Sechium edule HOM05D003622 ORTHO05D004453 2.1e-125 453.8 790 38.2
Lalb_Chr12g0198231 Lupinus albus HOM05D003622 ORTHO05D004453 3.6e-125 453.0 783 37.3
Phvul.003G169000 Phaseolus vulgaris HOM05D003622 ORTHO05D004453 3.6e-125 453.0 793 37.5
CiPaw.04G174900 Carya illinoinensis HOM05D003622 ORTHO05D004453 6.2e-125 452.2 777 38.7
FvH4_1g02580 Fragaria vesca HOM05D003622 ORTHO05D004453 6.2e-125 452.2 777 38.2
FAN19G0217 Fragaria x ananassa HOM05D003622 ORTHO05D004453 8.0e-125 451.8 777 38.1
FAN23G2517 Fragaria x ananassa HOM05D003622 ORTHO05D004453 8.0e-125 451.8 770 38.2
FAN28G0611 Fragaria x ananassa HOM05D003622 ORTHO05D004453 8.0e-125 451.8 781 37.9
Actinidia21950 Actinidia chinensis HOM05D003622 ORTHO05D004453 1.2e-123 448.0 798 38.5
MD15G1166400 Malus domestica HOM05D003622 ORTHO05D004453 3.4e-123 446.4 779 38.4
Sed0008371 Sechium edule HOM05D003622 ORTHO05D004453 2.2e-122 443.7 772 38.6
TAR625G0175 Trochodendron aralioides HOM05D003622 ORTHO05D004453 3.5e-120 436.4 787 38.2
Medtr4g115350 Medicago truncatula HOM05D003622 ORTHO05D004453 6.0e-120 435.6 791 35.8
Lalb_Chr07g0179261 Lupinus albus HOM05D003622 ORTHO05D004453 6.6e-119 432.2 800 36.9
Psat0s188g0040 Pisum sativum HOM05D003622 ORTHO05D004453 6.6e-119 432.2 780 35.5
QL02p089888 Quercus lobata HOM05D003622 ORTHO05D004453 6.6e-119 432.2 808 37.0
CSS0022552 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 1.9e-118 430.6 790 37.3
vmacro07722 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 3.3e-118 429.9 779 38.9
TPR.G24803 Trifolium pratense HOM05D003622 ORTHO05D004453 8.9e-116 421.8 793 35.8
Aqoxy7G03634 Aquilegia oxysepala HOM05D003622 ORTHO05D004453 5.8e-115 419.1 784 37.1
Ca_06943_v3 Cicer arietinum L. HOM05D003622 ORTHO05D004453 5.8e-115 419.1 762 37.1
Lalb_Chr11g0072261 Lupinus albus HOM05D003622 ORTHO05D004453 1.1e-113 414.8 821 35.9
Duzib187G1700 Durio zibethinus HOM05D003622 ORTHO05D004453 4.1e-113 412.9 765 37.4
Sabra06G0047800 Salix brachista HOM05D003622 ORTHO05D004453 9.2e-113 411.8 915 34.1
PGR102G2297 Punica granatum HOM05D003622 ORTHO05D004453 1.7e-111 407.5 780 35.4
PSO017G7291 Papaver somniferum HOM05D003622 ORTHO05D004453 3.0e-111 406.8 771 37.1
Eucgr.C01387 Eucalyptus grandis HOM05D003622 ORTHO05D004453 1.5e-110 404.4 779 37.1
PSO170G2238 Papaver somniferum HOM05D003622 ORTHO05D004453 1.4e-108 397.9 771 36.6
Hma1.2p1_0343F.1_g130930 Hydrangea macrophylla HOM05D003622 ORTHO05D004453 5.2e-108 396.0 698 37.7
Nitab4.5_0002008g0030 Nicotiana tabacum HOM05D003622 ORTHO05D004453 7.6e-107 392.1 804 34.5
Cpa.g.sc46.43 Carica papaya HOM05D003622 ORTHO05D004453 4.9e-106 389.4 650 40.8
Solyc07g007890.3 Solanum lycopersicum HOM05D003622 ORTHO05D004453 1.1e-105 388.3 783 34.9
Sc08g0006260 Simmondsia chinensis HOM05D003622 ORTHO05D004453 1.9e-105 387.5 777 34.2
Sopen07g003790 Solanum pennellii HOM05D003622 ORTHO05D004453 4.1e-105 386.3 782 34.8
BolC4t25898H Brassica oleracea HOM05D003622 ORTHO05D004453 5.4e-105 386.0 241 85.1
Nitab4.5_0003393g0070 Nicotiana tabacum HOM05D003622 ORTHO05D004453 1.6e-104 384.4 804 34.0
Peaxi162Scf00088g01327 Petunia axillaris HOM05D003622 ORTHO05D004453 6.0e-104 382.5 799 34.9
Rhsim03G0251600 Rhododendron simsii HOM05D003622 ORTHO05D004453 6.0e-104 382.5 779 35.2
AUR62013307 Chenopodium quinoa HOM05D003622 ORTHO05D004453 7.8e-104 382.1 784 33.5
PGSC0003DMG400030907 Solanum tuberosum HOM05D003622 ORTHO05D004453 1.3e-103 381.3 784 34.3
Actinidia07317 Actinidia chinensis HOM05D003622 ORTHO05D004453 2.3e-103 380.6 671 38.5
AUR62011177 Chenopodium quinoa HOM05D003622 ORTHO05D004453 7.3e-102 375.6 783 33.2
Hund09284 Selenicereus undatus HOM05D003622 ORTHO05D004453 1.6e-101 374.4 781 33.8
vmacro06154 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 2.8e-101 373.6 783 33.5
Hund26549 Selenicereus undatus HOM05D003622 ORTHO05D004453 1.1e-100 371.7 782 33.6
EL10Ac8g18721 Beta vulgaris HOM05D003622 ORTHO05D004453 1.8e-100 370.9 782 33.4
MSTRG.26437 Avicennia marina HOM05D003622 ORTHO05D004453 3.1e-100 370.2 800 34.2
SalBow1G3694 Salvia bowleyana HOM05D003622 ORTHO05D004453 8.9e-100 368.6 792 34.2
DCAR_020889 Daucus carota HOM05D003622 ORTHO05D004453 2.6e-99 367.1 796 34.9
Cc06_g08050 Coffea canephora HOM05D003622 ORTHO05D004453 4.4e-99 366.3 791 35.5
Rhsim01G0061400 Rhododendron simsii HOM05D003622 ORTHO05D004453 9.9e-99 365.2 924 31.8
FAN26G1654 Fragaria x ananassa HOM05D003622 ORTHO05D004453 6.4e-98 362.5 763 35.4
DCAR_009323 Daucus carota HOM05D003622 ORTHO05D004453 7.1e-97 359.0 823 33.8
SGA_v2.0_scaffold63G21826 Striga asiatica HOM05D003622 ORTHO05D004453 6.6e-95 352.4 818 33.0
Migut.K00423 Erythranthe guttata HOM05D003622 ORTHO05D004453 8.7e-95 352.1 757 33.9
CAN.G1266.4 Capsicum annuum HOM05D003622 ORTHO05D004453 1.5e-94 351.3 800 32.9
ClCG06G011530 Citrullus lanatus HOM05D003622 ORTHO05D004453 5.6e-94 349.4 402 49.0
CDE03G0113 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 1.3e-93 348.2 772 33.3
SalBow6G3081 Salvia bowleyana HOM05D003622 ORTHO05D004453 2.8e-93 347.1 787 33.3
CDE06G0586 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 6.2e-93 345.9 762 32.9
CSS0042071 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 1.1e-92 345.1 392 48.7
CSS0014966 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 2.4e-92 344.0 394 48.2
SGA_v2.0_scaffold464G52002 Striga asiatica HOM05D003622 ORTHO05D004453 5.3e-92 342.8 773 33.4
HanXRQChr12g0356631 Helianthus annuus HOM05D003622 ORTHO05D004453 8.4e-90 335.5 748 32.2
Lj7C432T7 Lonicera japonica HOM05D003622 ORTHO05D004453 2.4e-89 334.0 822 33.5
Migut.J01215 Erythranthe guttata HOM05D003622 ORTHO05D004453 1.2e-88 331.6 755 33.1
A04p09720 Brassica napus HOM05D003622 ORTHO05D004453 7.9e-88 328.9 200 84.5
TAR636G0579 Trochodendron aralioides HOM05D003622 ORTHO05D004453 1.8e-87 327.8 403 46.2
HanXRQChr10g0315861 Helianthus annuus HOM05D003622 ORTHO05D004453 3.9e-87 326.6 735 31.3
ATR0800G088 Amborella trichopoda HOM05D003622 ORTHO05D004453 1.5e-86 324.7 787 33.3
Os09g0123100 Oryza sativa ssp. japonica HOM05D003622 ORTHO05D004453 4.0e-84 316.6 766 32.2
ECA234G4065 Erigeron canadensis HOM05D003622 ORTHO05D004453 6.9e-84 315.8 728 32.4
Lsat_1_v5_gn_5_91841 Lactuca sativa HOM05D003622 ORTHO05D004453 1.5e-83 314.7 739 31.0
Zm00001eb308130 Zea mays HOM05D003622 ORTHO05D004453 9.9e-83 312.0 760 31.8
MBI13_g37002_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 3.2e-81 307.0 403 43.2
Oeu056946.1 Olea europaea HOM05D003622 ORTHO05D004453 2.1e-80 304.3 471 40.8
Zm00001eb095440 Zea mays HOM05D003622 ORTHO05D004453 1.8e-79 301.2 766 30.8
BraA04t16634Z Brassica rapa HOM05D003622 ORTHO05D004453 8.7e-79 298.9 200 77.5
Oeu052762.1 Olea europaea HOM05D003622 ORTHO05D004453 1.1e-78 298.5 369 46.6
Oeu055962.1 Olea europaea HOM05D003622 ORTHO05D004453 6.2e-77 292.7 637 36.4
Ah.09g224810 Amaranthus hybridus HOM05D003622 ORTHO05D004453 2.6e-75 287.3 393 43.3
Nn2g12120 Nelumbo nucifera HOM05D003622 ORTHO05D004453 6.0e-72 276.2 614 35.2
SEGI_29075 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 2.2e-66 257.7 822 28.2
C04p43210 Brassica napus HOM05D003622 ORTHO05D004453 1.6e-64 251.5 139 91.4
Mapoly0024s0101 Marchantia polymorpha HOM05D003622 ORTHO05D004453 3.6e-64 250.4 834 27.7
unitig_748.g7167 Utricularia gibba HOM05D003622 ORTHO05D004453 6.1e-64 249.6 378 40.7
unitig_0.g2718 Utricularia gibba HOM05D003622 ORTHO05D004453 2.3e-63 247.7 668 31.4
Pp3c15_17690 Physcomitrium patens HOM05D003622 ORTHO05D004453 3.0e-63 247.3 764 29.3
Pp3c9_20660 Physcomitrium patens HOM05D003622 ORTHO05D004453 3.7e-61 240.4 756 28.7
SHI22466 Sapria himalayana HOM05D003622 ORTHO05D004453 1.4e-60 238.4 404 38.4
SMO351G0297 Selaginella moellendorffii HOM05D003622 ORTHO05D004453 2.9e-58 230.7 752 28.3
Oeu052177.3 Olea europaea HOM05D003622 ORTHO05D004453 4.7e-48 196.8 626 28.4
HPP92_000465 Vanilla planifolia HOM05D003622 ORTHO05D004453 1.4e-39 168.7 516 28.7
TAR383G0647 Trochodendron aralioides HOM05D003622 ORTHO05D004453 2.2e-37 161.4 190 45.3
CSS0037660 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 2.4e-36 157.9 309 35.6
CBR_g27935 Chara braunii HOM05D000019 ORTHO05D000048 1.0e-34 152.5 510 27.1
Actinidia38718 Actinidia chinensis HOM05D003622 ORTHO05D004453 2.6e-30 137.9 170 43.5
MBI13_g02370_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 7.5e-30 136.3 400 31.2
AagrBONN_evm.TU.Sc2ySwM_344.2256 Anthoceros agrestis HOM05D003622 ORTHO05D004453 3.7e-21 107.5 232 34.5
HPP92_000473 Vanilla planifolia HOM05D003622 ORTHO05D004453 1.4e-20 105.5 210 35.2
unitig_748.g7166 Utricularia gibba HOM05D003622 ORTHO05D004453 3.1e-20 104.4 256 31.2
AagrBONN_evm.TU.Sc2ySwM_344.2257 Anthoceros agrestis HOM05D003622 ORTHO05D004453 2.9e-18 97.8 147 36.7
ClCG06G011520 Citrullus lanatus HOM05D003622 ORTHO05D004453 1.6e-16 92.0 109 47.7
Haze_25503 Corylus avellana HOM05D003622 ORTHO05D004453 4.0e-15 87.4 70 57.1
SHI22468 Sapria himalayana HOM05D003622 ORTHO05D004453 1.3e-13 82.4 111 42.3
SEGI_04910 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.1e-12 79.3 151 36.4
GSVIVG01013521001 Vitis vinifera HOM05D004687 ORTHO05D006002 1.4e-12 79.0 59 59.3
Actinidia38717 Actinidia chinensis HOM05D003622 ORTHO05D004453 7.8e-11 73.2 98 42.9
MBI13_g36807_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.0e-10 72.8 45 66.7
SEGI_22443 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 3.0e-10 71.2 62 51.6
Sabra10G0016400 Salix brachista HOM05D003622 ORTHO05D004453 6.6e-10 70.1 53 52.8
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 6.8e-07 60.1 104 38.5
Cpa.g.sc46.42 Carica papaya HOM05D003622 ORTHO05D004453 8.9e-07 59.7 101 41.6
MBI13_g48239_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 3.4e-06 57.8 137 38.7
Oeu042754.1 Olea europaea HOM05D003622 ORTHO05D004453 4.4e-06 57.4 42 57.1


User provided reference genes

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