Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g09460 Brassica carinata HOM05D000496 ORTHO05D014937 1.3e-88 329.7 174 100.0
BcaC03g14200 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-57 226.1 218 63.8
BcaC08g44730 Brassica carinata HOM05D000496 ORTHO05D019920 3.9e-48 195.3 133 79.7
BcaC02g10520 Brassica carinata HOM05D000496 ORTHO05D000411 2.8e-46 189.1 225 56.9
BcaC02g10380 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-30 137.1 147 61.9
BcaC07g37461 Brassica carinata HOM05D000496 ORTHO05D014937 5.9e-28 128.3 233 43.3
BcaC08g44039 Brassica carinata HOM05D000496 ORTHO05D014937 7.7e-28 127.9 148 53.4
BcaC03g16242 Brassica carinata HOM05D030143 ORTHO05D002152 2.3e-27 126.3 148 53.4
BcaC03g16444 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-27 126.3 145 57.2
BcaC04g21671 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-27 126.3 155 56.1
BcaC01g03089 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-26 123.6 222 43.2
BcaC03g15709 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-26 122.9 193 48.7
BcaC07g38782 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-25 120.2 144 52.8
BcaC04g22294 Brassica carinata HOM05D000496 ORTHO05D000411 6.8e-24 114.8 222 41.9
A05p20030 Brassica napus HOM05D000496 ORTHO05D014937 8.9e-24 114.4 135 51.1
BraA05t20909Z Brassica rapa HOM05D000496 ORTHO05D014937 8.9e-24 114.4 135 51.1
BcaC01g01905 Brassica carinata HOM05D000496 ORTHO05D014937 1.2e-23 114.0 230 40.4
BcaC03g14600 Brassica carinata HOM05D022631 ORTHO05D024363 2.8e-22 109.4 110 59.1
BcaC03g15984 Brassica carinata HOM05D000496 ORTHO05D000411 6.3e-22 108.2 169 46.7
BcaC01g02163 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-21 107.1 203 40.9
BolC5t33757H Brassica oleracea HOM05D000496 ORTHO05D014937 3.1e-21 105.9 207 38.2
BolC8t49340H Brassica oleracea HOM05D000496 ORTHO05D014937 7.0e-21 104.8 127 52.0
A03p66750 Brassica napus HOM05D022631 ORTHO05D024363 1.7e-19 100.1 127 49.6
BolC3t19004H Brassica oleracea HOM05D000496 ORTHO05D019920 1.1e-18 97.4 134 53.0
BcaC02g09892 Brassica carinata HOM05D000496 ORTHO05D032642 1.9e-18 96.7 220 35.5
BcaC01g02264 Brassica carinata HOM05D000496 ORTHO05D019920 2.5e-18 96.3 134 52.2
BcaC09g49650 Brassica carinata HOM05D000496 ORTHO05D095876 4.3e-18 95.5 191 41.9
BcaB08g35328 Brassica carinata HOM05D000496 ORTHO05D000411 7.3e-18 94.7 153 44.4
BcaC06g36700 Brassica carinata HOM05D000496 ORTHO05D000411 9.5e-18 94.4 135 45.9
BraA01t03743Z Brassica rapa HOM05D000496 ORTHO05D019920 9.5e-18 94.4 128 46.9
BcaC03g15107 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-17 93.2 222 37.8
BolC9t55004H Brassica oleracea HOM05D000496 ORTHO05D014937 8.0e-17 91.3 148 43.9
BolC3t20864H Brassica oleracea HOM05D000496 ORTHO05D014937 1.8e-16 90.1 121 50.4
BcaB07g33420 Brassica carinata HOM05D000496 ORTHO05D014937 5.2e-16 88.6 157 41.4
BcaC03g14607 Brassica carinata HOM05D000496 ORTHO05D031790 5.2e-16 88.6 150 44.7
BcaC08g47088 Brassica carinata HOM05D000496 ORTHO05D000411 6.8e-16 88.2 142 42.3
BcaC03g17067 Brassica carinata HOM05D000496 ORTHO05D095706 1.5e-15 87.0 132 45.5
BcaC08g46179 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-15 86.7 215 34.0
BcaC09g47909 Brassica carinata HOM05D000496 ORTHO05D000411 5.8e-15 85.1 191 38.2
C04p35470 Brassica napus HOM05D000496 ORTHO05D032642 9.8e-15 84.3 208 34.1
BcaB06g27458 Brassica carinata HOM05D000496 ORTHO05D039111 1.7e-14 83.6 131 45.8
BcaC06g34334 Brassica carinata HOM05D000496 ORTHO05D039093 1.7e-14 83.6 134 44.0
BolC4t26275H Brassica oleracea HOM05D000496 ORTHO05D039111 1.7e-14 83.6 131 45.8
BolC7t43560H Brassica oleracea HOM05D000496 ORTHO05D039093 2.9e-14 82.8 134 44.0
C02p20400 Brassica napus HOM05D022631 ORTHO05D024363 3.7e-14 82.4 96 54.2
BolC2t08173H Brassica oleracea HOM05D022631 ORTHO05D024363 3.7e-14 82.4 96 54.2
BolC4t26549H Brassica oleracea HOM05D000496 ORTHO05D000411 3.7e-14 82.4 188 35.6
BolC4t25099H Brassica oleracea HOM05D000496 ORTHO05D032642 4.9e-14 82.0 212 33.5
BolC9t59068H Brassica oleracea HOM05D000496 ORTHO05D014937 8.3e-14 81.3 155 42.6
BcaC04g22204 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-13 80.9 144 41.7
BcaC04g19004 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-13 80.5 134 42.5
BcaC05g25070 Brassica carinata HOM05D030143 ORTHO05D039637 1.8e-13 80.1 75 64.0
BcaC03g15417 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-13 79.3 98 51.0
BolC5t33309H Brassica oleracea HOM05D000496 ORTHO05D039269 4.1e-13 79.0 142 42.3
BraA01t02806Z Brassica rapa HOM05D022631 ORTHO05D024363 9.2e-13 77.8 106 49.1
BcaC01g01965 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-12 77.4 176 36.4
BcaC09g49414 Brassica carinata HOM05D000496 ORTHO05D094999 1.6e-12 77.0 141 42.6
BcaC05g28640 Brassica carinata HOM05D000496 ORTHO05D014937 2.0e-12 76.6 160 40.6
BcaC01g03438 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-12 76.3 197 35.5
BcaC01g05229 Brassica carinata HOM05D000496 ORTHO05D039269 2.7e-12 76.3 142 41.5
BcaB01g01320 Brassica carinata HOM05D030143 ORTHO05D092293 3.5e-12 75.9 97 48.5
BcaC04g22137 Brassica carinata HOM05D000496 ORTHO05D019920 7.8e-12 74.7 68 61.8
BcaC08g43480 Brassica carinata HOM05D000496 ORTHO05D000411 7.8e-12 74.7 164 37.8
C06p36470 Brassica napus HOM05D030143 ORTHO05D039637 1.0e-11 74.3 75 61.3
BcaC05g28506 Brassica carinata HOM05D000496 ORTHO05D093697 1.3e-11 73.9 218 33.5
BolC6t35943H Brassica oleracea HOM05D000496 ORTHO05D000411 1.7e-11 73.6 164 37.8
BcaC09g50802 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-11 73.2 203 36.9
BcaC01g02211 Brassica carinata HOM05D000496 ORTHO05D000411 3.9e-11 72.4 141 39.0
BolC2t08741H Brassica oleracea HOM05D000496 ORTHO05D019920 8.6e-11 71.2 147 36.1
BcaB03g14222 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-10 70.9 215 31.6
BolC7t41272H Brassica oleracea HOM05D000496 ORTHO05D000411 1.5e-10 70.5 142 40.8
BcaC04g19440 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-10 69.7 143 39.2
BcaC08g44837 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-10 69.7 154 38.3
BcaB06g26381 Brassica carinata HOM05D000496 ORTHO05D000411 4.3e-10 68.9 180 34.4
BcaB06g28121 Brassica carinata HOM05D000496 ORTHO05D000411 5.6e-10 68.6 180 33.9
BcaNung03853 Brassica carinata HOM05D000496 ORTHO05D039941 7.3e-10 68.2 103 46.6
BcaC06g36040 Brassica carinata HOM05D005496 ORTHO05D006677 9.5e-10 67.8 153 37.3
BcaB06g26444 Brassica carinata HOM05D000496 ORTHO05D091650 1.2e-09 67.4 215 31.2
C04p23060 Brassica napus HOM05D000496 ORTHO05D019920 1.6e-09 67.0 89 51.7
BcaC01g01239 Brassica carinata HOM05D000496 ORTHO05D000411 2.8e-09 66.2 184 34.8
BcaC03g15800 Brassica carinata HOM05D000496 ORTHO05D000411 8.0e-09 64.7 218 29.8
BcaB04g17470 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-08 63.9 119 39.5
BcaB04g17612 Brassica carinata HOM05D000496 ORTHO05D090729 1.8e-08 63.5 140 36.4
BcaC08g43454 Brassica carinata HOM05D000496 ORTHO05D031880 5.2e-08 62.0 144 36.1
BcaC08g45123 Brassica carinata HOM05D000496 ORTHO05D000411 8.9e-08 61.2 144 36.1
BcaB07g33378 Brassica carinata HOM05D000496 ORTHO05D095967 2.6e-07 59.7 181 34.3
BcaC09g49773 Brassica carinata HOM05D000496 ORTHO05D000411 2.6e-07 59.7 142 36.6
BcaC04g20576 Brassica carinata HOM05D000496 ORTHO05D039987 3.4e-07 59.3 226 30.1
BcaC02g10837 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-07 58.9 93 44.1
BcaC05g27902 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-07 58.9 159 36.5
BcaC06g33823 Brassica carinata HOM05D000496 ORTHO05D031880 4.4e-07 58.9 144 35.4
BcaC04g23650 Brassica carinata HOM05D000496 ORTHO05D000411 9.8e-07 57.8 183 34.4
BolC9t55084H Brassica oleracea HOM05D020706 ORTHO05D032392 9.8e-07 57.8 162 35.8
BcaC01g01876 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-06 57.4 86 44.2
BcaC06g36712 Brassica carinata HOM05D000496 ORTHO05D032668 1.3e-06 57.4 68 48.5
C08p18460 Brassica napus HOM05D000496 ORTHO05D042898 1.7e-06 57.0 108 39.8
BolC3t17900H Brassica oleracea HOM05D000496 ORTHO05D039941 1.7e-06 57.0 71 50.7
BolC8t47230H Brassica oleracea HOM05D000496 ORTHO05D039815 1.7e-06 57.0 155 32.9
BcaC02g08909 Brassica carinata HOM05D010392 ORTHO05D000411 2.2e-06 56.6 132 38.6
BcaC06g36099 Brassica carinata HOM05D010392 ORTHO05D000411 4.9e-06 55.5 176 34.7
BcaC09g50172 Brassica carinata HOM05D025630 ORTHO05D032542 4.9e-06 55.5 83 45.8
A05p21370 Brassica napus HOM05D015634 ORTHO05D021759 8.3e-06 54.7 135 36.3
BraA05t21045Z Brassica rapa HOM05D015634 ORTHO05D021759 8.3e-06 54.7 135 36.3


User provided reference genes

Program Settings