Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g09420 Brassica carinata HOM05D000022 ORTHO05D094339 2.9e-51 204.9 100 100.0
BcaB03g16087 Brassica carinata HOM05D000022 ORTHO05D000071 1.5e-23 112.8 77 77.9
BcaC02g09421 Brassica carinata HOM05D000022 ORTHO05D000071 5.8e-20 100.9 78 69.2
C04p42430 Brassica napus HOM05D000022 ORTHO05D000071 5.8e-20 100.9 78 69.2
BolC4t25822H Brassica oleracea HOM05D000022 ORTHO05D000071 5.8e-20 100.9 78 69.2
BraA04t16559Z Brassica rapa HOM05D000022 ORTHO05D000071 1.7e-19 99.4 78 67.9
A04p08660 Brassica napus HOM05D000022 ORTHO05D000071 4.2e-18 94.7 77 66.2
AL7G30170 Arabidopsis lyrata HOM05D000022 ORTHO05D000071 3.0e-16 88.6 77 62.3
Sp7g21235 Schrenkiella parvula HOM05D000022 ORTHO05D000071 6.7e-16 87.4 77 61.0
Carub.0007s1790 Capsella rubella HOM05D000022 ORTHO05D000071 5.6e-15 84.3 77 59.7
AL7G30160 Arabidopsis lyrata HOM05D000022 ORTHO05D000071 9.6e-15 83.6 76 57.9
Thhalv10024598m.g Eutrema salsugineum HOM05D000022 ORTHO05D000071 4.8e-14 81.3 77 53.2
Sp4g03820 Schrenkiella parvula HOM05D000022 ORTHO05D000071 1.8e-13 79.3 77 50.6
AT4G23250 Arabidopsis thaliana HOM05D000022 ORTHO05D000071 2.4e-13 79.0 76 55.3
BolC7t45752H Brassica oleracea HOM05D000022 ORTHO05D000071 2.4e-13 79.0 77 54.5
A03p54190 Brassica napus HOM05D000022 ORTHO05D000071 5.3e-13 77.8 77 51.9
CARHR230500 Cardamine hirsuta HOM05D000022 ORTHO05D000071 5.3e-13 77.8 77 53.2
BcaNung03263 Brassica carinata HOM05D000022 ORTHO05D000071 6.9e-13 77.4 81 51.9
C03p84660 Brassica napus HOM05D000022 ORTHO05D000071 9.0e-13 77.0 77 53.2
BolC3t20753H Brassica oleracea HOM05D000022 ORTHO05D000071 9.0e-13 77.0 77 53.2
A08p16130 Brassica napus HOM05D000022 ORTHO05D000071 1.5e-12 76.3 77 53.2
BraA08t33583Z Brassica rapa HOM05D000022 ORTHO05D000071 1.5e-12 76.3 77 53.2
Sp7g21230 Schrenkiella parvula HOM05D000022 ORTHO05D000071 1.5e-12 76.3 77 50.6
AT4G23260 Arabidopsis thaliana HOM05D000022 ORTHO05D000071 2.6e-12 75.5 76 52.6
BcaNung01460 Brassica carinata HOM05D000022 ORTHO05D000071 4.5e-12 74.7 77 51.9
BolC7t45750H Brassica oleracea HOM05D000022 ORTHO05D000071 4.5e-12 74.7 77 51.9
Thhalv10000069m.g Eutrema salsugineum HOM05D000022 ORTHO05D000071 7.6e-12 73.9 81 50.6
C07p52560 Brassica napus HOM05D000022 ORTHO05D000071 2.9e-11 72.0 84 50.0
C04p54720 Brassica napus HOM05D000022 ORTHO05D000071 4.9e-11 71.2 91 45.1
THA.LOC104814550 Tarenaya hassleriana HOM05D000022 ORTHO05D000071 8.4e-11 70.5 78 47.4
THA.LOC104814545 Tarenaya hassleriana HOM05D000022 ORTHO05D000071 1.1e-10 70.1 77 49.4
BcaNung03265 Brassica carinata HOM05D000022 ORTHO05D000071 1.4e-10 69.7 77 49.4
BcaNung03262 Brassica carinata HOM05D000022 ORTHO05D000071 1.9e-10 69.3 77 50.6
BcaB06g28017 Brassica carinata HOM05D000022 ORTHO05D017657 3.2e-10 68.6 82 47.6
Sp6g05940 Schrenkiella parvula HOM05D000022 ORTHO05D000071 4.2e-10 68.2 77 44.2
AL6G45950 Arabidopsis lyrata HOM05D000022 ORTHO05D000071 1.2e-09 66.6 77 41.6
A08p16120 Brassica napus HOM05D000022 ORTHO05D000071 1.2e-09 66.6 84 42.9
CARHR255080 Cardamine hirsuta HOM05D000022 ORTHO05D000071 1.6e-09 66.2 79 46.8
Thhalv10024606m.g Eutrema salsugineum HOM05D000022 ORTHO05D000071 1.6e-09 66.2 87 43.7
Carub.0006s3044 Capsella rubella HOM05D000022 ORTHO05D000071 2.1e-09 65.9 77 41.6
Aa31LG6G6560 Aethionema arabicum HOM05D000022 ORTHO05D000071 3.5e-09 65.1 77 40.3
BcaB01g02694 Brassica carinata HOM05D000022 ORTHO05D000071 3.5e-09 65.1 77 42.9
Thhalv10028496m.g Eutrema salsugineum HOM05D000022 ORTHO05D000071 3.5e-09 65.1 77 42.9
THA.LOC104806402 Tarenaya hassleriana HOM05D000022 ORTHO05D000071 3.5e-09 65.1 77 41.6
THA.LOC104806405 Tarenaya hassleriana HOM05D000022 ORTHO05D000071 3.5e-09 65.1 77 41.6
AL7G30270 Arabidopsis lyrata HOM05D000022 ORTHO05D000071 7.9e-09 63.9 86 46.5
BcaC01g04628 Brassica carinata HOM05D000022 ORTHO05D000071 7.9e-09 63.9 77 41.6
A08p16020 Brassica napus HOM05D000022 ORTHO05D000071 7.9e-09 63.9 78 44.9
BraA08t33574Z Brassica rapa HOM05D000022 ORTHO05D000071 7.9e-09 63.9 78 44.9
THA.LOC104806406 Tarenaya hassleriana HOM05D000022 ORTHO05D000071 7.9e-09 63.9 77 41.6
BcaC01g03193 Brassica carinata HOM05D000022 ORTHO05D000071 1.0e-08 63.5 77 42.9
BcaNung01012 Brassica carinata HOM05D000022 ORTHO05D000071 1.0e-08 63.5 78 43.6
A01p14150 Brassica napus HOM05D000022 ORTHO05D000071 1.0e-08 63.5 87 42.5
A03p29370 Brassica napus HOM05D000022 ORTHO05D000071 1.0e-08 63.5 77 41.6
BolC3t17778H Brassica oleracea HOM05D000022 ORTHO05D000071 1.0e-08 63.5 77 42.9
BraA01t01364Z Brassica rapa HOM05D000022 ORTHO05D000071 1.0e-08 63.5 87 42.5
BraA03t12133Z Brassica rapa HOM05D000022 ORTHO05D000071 1.0e-08 63.5 77 41.6
Sp6g05980 Schrenkiella parvula HOM05D000022 ORTHO05D000071 1.0e-08 63.5 77 41.6
Sp7g21010 Schrenkiella parvula HOM05D000022 ORTHO05D000071 1.0e-08 63.5 87 41.4
THA.LOC104806395 Tarenaya hassleriana HOM05D000022 ORTHO05D000071 1.0e-08 63.5 77 41.6
THA.LOC104814524 Tarenaya hassleriana HOM05D000022 ORTHO05D000071 1.0e-08 63.5 77 39.0
BcaC01g00813 Brassica carinata HOM05D000022 ORTHO05D000071 1.3e-08 63.2 84 41.7
A09p27670 Brassica napus HOM05D000022 ORTHO05D000071 1.3e-08 63.2 77 45.5
C03p55030 Brassica napus HOM05D000022 ORTHO05D000071 1.3e-08 63.2 77 42.9
C03p84650 Brassica napus HOM05D000022 ORTHO05D000071 1.3e-08 63.2 84 41.7
BraA09t38337Z Brassica rapa HOM05D000022 ORTHO05D000071 1.3e-08 63.2 77 45.5
BcaNung01457 Brassica carinata HOM05D000022 ORTHO05D000071 1.8e-08 62.8 87 41.4
C07p52580 Brassica napus HOM05D000022 ORTHO05D000071 1.8e-08 62.8 87 41.4
BolC7t45754H Brassica oleracea HOM05D000022 ORTHO05D000071 1.8e-08 62.8 87 41.4
Sp6g05970 Schrenkiella parvula HOM05D000022 ORTHO05D000071 1.8e-08 62.8 77 41.6
AT4G11480 Arabidopsis thaliana HOM05D000022 ORTHO05D000071 2.3e-08 62.4 77 39.0
BcaNung01016 Brassica carinata HOM05D000022 ORTHO05D001935 2.3e-08 62.4 79 44.3
BcaB01g02693 Brassica carinata HOM05D000022 ORTHO05D000071 3.0e-08 62.0 78 42.3
BcaC09g51057 Brassica carinata HOM05D000022 ORTHO05D006195 3.0e-08 62.0 87 40.2
BcaNung01015 Brassica carinata HOM05D000022 ORTHO05D000071 3.0e-08 62.0 87 40.2
C01p17440 Brassica napus HOM05D000022 ORTHO05D006195 3.0e-08 62.0 87 40.2
BolC1t01683H Brassica oleracea HOM05D000022 ORTHO05D000071 3.0e-08 62.0 87 40.2
Carub.0006s3045 Capsella rubella HOM05D000022 ORTHO05D000071 3.0e-08 62.0 84 41.7
Sp6g05950 Schrenkiella parvula HOM05D000022 ORTHO05D000071 3.0e-08 62.0 77 41.6
BcaC04g21149 Brassica carinata HOM05D000022 ORTHO05D000071 3.9e-08 61.6 83 39.8
BcaC09g51023 Brassica carinata HOM05D000022 ORTHO05D000071 3.9e-08 61.6 76 36.8
BcaNung01451 Brassica carinata HOM05D000022 ORTHO05D000071 3.9e-08 61.6 76 38.2
A01p14180 Brassica napus HOM05D005273 ORTHO05D006195 3.9e-08 61.6 79 44.3
A03p44410 Brassica napus HOM05D006660 ORTHO05D008184 3.9e-08 61.6 77 41.6
C01p17780 Brassica napus HOM05D000022 ORTHO05D000071 3.9e-08 61.6 76 36.8
C03p35480 Brassica napus HOM05D000022 ORTHO05D000071 3.9e-08 61.6 77 40.3
BolC1t01711H Brassica oleracea HOM05D000022 ORTHO05D000071 3.9e-08 61.6 76 36.8
BolC3t15862H Brassica oleracea HOM05D000022 ORTHO05D000071 3.9e-08 61.6 77 40.3
Manes.16G014700 Manihot esculenta HOM05D000022 ORTHO05D000071 3.9e-08 61.6 77 37.7
BraA03t13573Z Brassica rapa HOM05D000022 ORTHO05D000071 5.1e-08 61.2 77 41.6
Carub.0007s1805 Capsella rubella HOM05D000022 ORTHO05D000071 5.1e-08 61.2 77 37.7
BcaC01g00802 Brassica carinata HOM05D000022 ORTHO05D000071 8.7e-08 60.5 87 41.4
BcaC09g51061 Brassica carinata HOM05D000022 ORTHO05D000071 8.7e-08 60.5 79 44.3
C01p17400 Brassica napus HOM05D000022 ORTHO05D001935 8.7e-08 60.5 79 44.3
C03p84470 Brassica napus HOM05D000022 ORTHO05D000071 8.7e-08 60.5 87 41.4
BolC1t01677H Brassica oleracea HOM05D000022 ORTHO05D001935 8.7e-08 60.5 79 44.3
BolC3t20737H Brassica oleracea HOM05D000022 ORTHO05D000071 8.7e-08 60.5 87 41.4
CARHR255040 Cardamine hirsuta HOM05D000022 ORTHO05D000071 8.7e-08 60.5 77 41.6
THA.LOC104806399 Tarenaya hassleriana HOM05D000022 ORTHO05D000071 8.7e-08 60.5 78 41.0
BcaNung01013 Brassica carinata HOM05D000022 ORTHO05D000071 1.1e-07 60.1 78 42.3
A03p29380 Brassica napus HOM05D000022 ORTHO05D000071 1.1e-07 60.1 80 40.0
BraA01t01367Z Brassica rapa HOM05D005273 ORTHO05D006195 1.1e-07 60.1 87 39.1
Carub.0007s1792 Capsella rubella HOM05D000022 ORTHO05D000071 1.1e-07 60.1 78 42.3
Carub.0007s1807 Capsella rubella HOM05D000022 ORTHO05D000071 1.1e-07 60.1 77 36.4
BcaB08g34484 Brassica carinata HOM05D000022 ORTHO05D000071 1.5e-07 59.7 77 40.3
A01p14430 Brassica napus HOM05D000022 ORTHO05D000071 1.5e-07 59.7 76 36.8
BraA09t38333Z Brassica rapa HOM05D000022 ORTHO05D000071 1.5e-07 59.7 84 39.3
CARHR230400 Cardamine hirsuta HOM05D000022 ORTHO05D000071 1.5e-07 59.7 78 44.9
BcaC03g17823 Brassica carinata HOM05D000022 ORTHO05D000071 1.9e-07 59.3 77 37.7
C02p58520 Brassica napus HOM05D000022 ORTHO05D000071 1.9e-07 59.3 77 37.7
C03p84460 Brassica napus HOM05D000022 ORTHO05D000071 1.9e-07 59.3 78 42.3
BolC2t11913H Brassica oleracea HOM05D000022 ORTHO05D000071 1.9e-07 59.3 77 37.7
BolC3t20736H Brassica oleracea HOM05D000022 ORTHO05D000071 1.9e-07 59.3 78 42.3
BraA01t01366Z Brassica rapa HOM05D000022 ORTHO05D000071 1.9e-07 59.3 79 43.0
BraA01t01389Z Brassica rapa HOM05D000022 ORTHO05D000071 1.9e-07 59.3 76 36.8
CARHR230350 Cardamine hirsuta HOM05D000022 ORTHO05D000071 1.9e-07 59.3 84 42.9
Thhalv10024579m.g Eutrema salsugineum HOM05D000022 ORTHO05D000071 1.9e-07 59.3 78 43.6
THA.LOC104806401 Tarenaya hassleriana HOM05D000022 ORTHO05D000071 1.9e-07 59.3 77 39.0
BcaC01g00801 Brassica carinata HOM05D000022 ORTHO05D000071 2.5e-07 58.9 78 41.0
A01p14140 Brassica napus HOM05D001983 ORTHO05D001935 2.5e-07 58.9 90 40.0
BraA01t01363Z Brassica rapa HOM05D000022 ORTHO05D000071 2.5e-07 58.9 79 43.0
CARHR230390 Cardamine hirsuta HOM05D000022 ORTHO05D000071 2.5e-07 58.9 78 43.6
Thhalv10029336m.g Eutrema salsugineum HOM05D000022 ORTHO05D000071 2.5e-07 58.9 84 38.1
Sp7g21250 Schrenkiella parvula HOM05D000022 ORTHO05D000071 2.5e-07 58.9 87 40.2
THA.LOC104806403 Tarenaya hassleriana HOM05D000022 ORTHO05D000071 2.5e-07 58.9 82 40.2
BcaB03g11749 Brassica carinata HOM05D000022 ORTHO05D000071 3.3e-07 58.5 87 41.4
BcaC09g51059 Brassica carinata HOM05D000022 ORTHO05D000071 3.3e-07 58.5 87 39.1
A08p16030 Brassica napus HOM05D000022 ORTHO05D000071 3.3e-07 58.5 78 43.6
C01p17410 Brassica napus HOM05D000022 ORTHO05D000071 3.3e-07 58.5 87 39.1
C09p35050 Brassica napus HOM05D000022 ORTHO05D000071 3.3e-07 58.5 77 42.9
BolC9t56351H Brassica oleracea HOM05D000022 ORTHO05D000071 3.3e-07 58.5 77 42.9
BraA08t33575Z Brassica rapa HOM05D000022 ORTHO05D000071 3.3e-07 58.5 78 43.6
Thhalv10024615m.g Eutrema salsugineum HOM05D000022 ORTHO05D000071 3.3e-07 58.5 87 41.4
Thhalv10028508m.g Eutrema salsugineum HOM05D000022 ORTHO05D000071 3.3e-07 58.5 77 41.6
Sp6g05930 Schrenkiella parvula HOM05D000022 ORTHO05D000071 3.3e-07 58.5 77 42.9
CARHR230480 Cardamine hirsuta HOM05D000022 ORTHO05D000071 4.3e-07 58.2 77 37.7
THA.LOC104806396 Tarenaya hassleriana HOM05D000022 ORTHO05D000071 4.3e-07 58.2 86 36.0
AL7G30280 Arabidopsis lyrata HOM05D000022 ORTHO05D000071 5.7e-07 57.8 78 42.3
BcaB03g11750 Brassica carinata HOM05D000022 ORTHO05D000071 5.7e-07 57.8 96 37.5
BcaNung00992 Brassica carinata HOM05D000022 ORTHO05D000071 5.7e-07 57.8 76 35.5
Dinv18919 Davidia involucrata HOM05D000022 ORTHO05D000306 5.7e-07 57.8 77 36.4
AT4G23190 Arabidopsis thaliana HOM05D000022 ORTHO05D000071 7.4e-07 57.4 78 43.6
BraA03t14482Z Brassica rapa HOM05D000022 ORTHO05D000071 7.4e-07 57.4 78 43.6
Aa31LG9G10760 Aethionema arabicum HOM05D000022 ORTHO05D000071 9.6e-07 57.0 86 38.4
BcaC04g21144 Brassica carinata HOM05D000022 ORTHO05D000071 9.6e-07 57.0 75 40.0
A09p32930 Brassica napus HOM05D000022 ORTHO05D000071 9.6e-07 57.0 87 40.2
C09p35060 Brassica napus HOM05D000022 ORTHO05D000071 9.6e-07 57.0 75 40.0
BolC9t56353H Brassica oleracea HOM05D000022 ORTHO05D000071 9.6e-07 57.0 75 40.0
BraA09t38835Z Brassica rapa HOM05D000022 ORTHO05D000071 9.6e-07 57.0 87 40.2
THA.LOC104806398 Tarenaya hassleriana HOM05D000022 ORTHO05D000071 9.6e-07 57.0 77 39.0
Carub.0007s1794 Capsella rubella HOM05D000022 ORTHO05D000071 1.3e-06 56.6 74 40.5
CARHR230300 Cardamine hirsuta HOM05D000022 ORTHO05D000071 1.3e-06 56.6 78 41.0
CARHR254870 Cardamine hirsuta HOM05D000022 ORTHO05D000071 1.3e-06 56.6 77 41.6
CARHR057450 Cardamine hirsuta HOM05D000022 ORTHO05D000071 1.6e-06 56.2 77 39.0
AT4G11490 Arabidopsis thaliana HOM05D000022 ORTHO05D000071 2.1e-06 55.8 77 35.1
AT4G23200 Arabidopsis thaliana HOM05D000022 ORTHO05D000071 2.1e-06 55.8 77 39.0
Carub.0007s1795 Capsella rubella HOM05D000022 ORTHO05D000071 2.1e-06 55.8 87 39.1
Carub.0007s1808 Capsella rubella HOM05D000022 ORTHO05D000071 2.1e-06 55.8 78 41.0
BcaNung01014 Brassica carinata HOM05D000022 ORTHO05D000071 2.8e-06 55.5 78 39.7
BcaNung03261 Brassica carinata HOM05D000022 ORTHO05D000071 2.8e-06 55.5 78 39.7
A09p27680 Brassica napus HOM05D000022 ORTHO05D000071 2.8e-06 55.5 75 40.0
BraA09t38338Z Brassica rapa HOM05D000022 ORTHO05D000071 2.8e-06 55.5 75 40.0
Carub.0007s1791 Capsella rubella HOM05D000022 ORTHO05D000071 2.8e-06 55.5 40 65.0
Potri.011G029201 Populus trichocarpa HOM05D000022 ORTHO05D000071 2.8e-06 55.5 76 36.8
Sp7g21220 Schrenkiella parvula HOM05D000022 ORTHO05D000071 2.8e-06 55.5 80 41.2
CARHR230630 Cardamine hirsuta HOM05D000022 ORTHO05D000071 3.7e-06 55.1 75 38.7
Nn1g03701 Nelumbo nucifera HOM05D000022 ORTHO05D000071 3.7e-06 55.1 77 37.7
Sp6g06040 Schrenkiella parvula HOM05D000022 ORTHO05D000071 3.7e-06 55.1 86 37.2
THA.LOC104806391 Tarenaya hassleriana HOM05D000022 ORTHO05D000071 3.7e-06 55.1 77 36.4
Aa31LG9G10770 Aethionema arabicum HOM05D000022 ORTHO05D000071 4.8e-06 54.7 77 39.0
Carub.0006s3043 Capsella rubella HOM05D000022 ORTHO05D000071 4.8e-06 54.7 78 39.7
Carub.0007s1835 Capsella rubella HOM05D000022 ORTHO05D000071 6.2e-06 54.3 40 60.0
CARHR264010 Cardamine hirsuta HOM05D000022 ORTHO05D000071 6.2e-06 54.3 78 41.0
Thhalv10028491m.g Eutrema salsugineum HOM05D000022 ORTHO05D000071 6.2e-06 54.3 77 40.3
BcaC06g33492 Brassica carinata HOM05D000022 ORTHO05D000071 8.2e-06 53.9 77 36.4
A03p49970 Brassica napus HOM05D007337 ORTHO05D004972 8.2e-06 53.9 77 36.4
BraA03t14090Z Brassica rapa HOM05D000022 ORTHO05D000071 8.2e-06 53.9 77 36.4
Potri.011G030200 Populus trichocarpa HOM05D000022 ORTHO05D000071 8.2e-06 53.9 76 35.5


User provided reference genes

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