Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g09416 Brassica carinata HOM05D005842 ORTHO05D007077 7.8e-43 177.2 122 100.0
BcaB03g16079 Brassica carinata HOM05D005842 ORTHO05D007077 1.6e-24 116.3 94 97.9
C04p42360 Brassica napus HOM05D005842 ORTHO05D007077 2.4e-23 112.5 111 84.7
SpUn0225_0010 Schrenkiella parvula HOM05D005842 ORTHO05D007077 1.2e-22 110.2 94 95.7
BcaC02g09413 Brassica carinata HOM05D005842 ORTHO05D007077 9.9e-22 107.1 94 93.6
BcaC02g09414 Brassica carinata HOM05D005842 ORTHO05D007077 9.9e-22 107.1 94 93.6
BcaC02g09415 Brassica carinata HOM05D005842 ORTHO05D007077 9.9e-22 107.1 94 93.6
A04p08620 Brassica napus HOM05D005842 ORTHO05D007077 2.4e-20 102.4 95 92.6
BraA04t16556Z Brassica rapa HOM05D005842 ORTHO05D007077 2.4e-20 102.4 95 92.6
Aa31LG9G4090 Aethionema arabicum HOM05D005842 ORTHO05D007077 4.0e-15 85.1 105 78.1
BcaC07g37350 Brassica carinata HOM05D005842 ORTHO05D007077 6.9e-15 84.3 94 81.9
Thhalv10026478m.g Eutrema salsugineum HOM05D005842 ORTHO05D007077 9.0e-15 84.0 94 80.9
BcaB04g17686 Brassica carinata HOM05D005842 ORTHO05D007077 1.2e-14 83.6 94 80.9
AL7G43170 Arabidopsis lyrata HOM05D005842 ORTHO05D007077 2.0e-14 82.8 94 80.9
CARHR219200 Cardamine hirsuta HOM05D005842 ORTHO05D007077 7.6e-14 80.9 94 80.9
Actinidia11383 Actinidia chinensis HOM05D005842 ORTHO05D007077 1.7e-13 79.7 93 49.5
A08p06740 Brassica napus HOM05D005842 ORTHO05D007077 1.7e-13 79.7 95 81.1
BolC8t47646H Brassica oleracea HOM05D005842 ORTHO05D007077 1.7e-13 79.7 95 81.1
BraA08t32692Z Brassica rapa HOM05D005842 ORTHO05D007077 1.7e-13 79.7 95 81.1
Actinidia25095 Actinidia chinensis HOM05D005842 ORTHO05D007077 2.9e-13 79.0 93 49.5
THA.LOC104821628 Tarenaya hassleriana HOM05D005842 ORTHO05D007077 3.8e-13 78.6 94 51.1
Actinidia39941 Actinidia chinensis HOM05D005842 ORTHO05D007077 6.4e-13 77.8 93 49.5
C08p07940 Brassica napus HOM05D005842 ORTHO05D007077 6.4e-13 77.8 44 93.2
C03p53480 Brassica napus HOM05D005842 ORTHO05D007077 1.1e-12 77.0 93 52.7
BcaC06g35667 Brassica carinata HOM05D003628 ORTHO05D004253 1.4e-12 76.6 94 54.3
AT4G13560 Arabidopsis thaliana HOM05D005842 ORTHO05D007077 1.9e-12 76.3 94 77.7
BcaB06g26603 Brassica carinata HOM05D005842 ORTHO05D007077 1.9e-12 76.3 95 53.7
CSS0006411 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 4.2e-12 75.1 93 48.4
Migut.H00813 Erythranthe guttata HOM05D005842 ORTHO05D007077 9.3e-12 73.9 94 48.9
Dinv29780 Davidia involucrata HOM05D005842 ORTHO05D007077 1.6e-11 73.2 92 50.0
Dinv29781 Davidia involucrata HOM05D005842 ORTHO05D007077 1.6e-11 73.2 92 50.0
MD13G1226500 Malus domestica HOM05D005842 ORTHO05D007077 2.7e-11 72.4 93 46.2
MD16G1231600 Malus domestica HOM05D005842 ORTHO05D007077 2.7e-11 72.4 93 46.2
CSS0017402 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 4.6e-11 71.6 90 44.4
Hma1.2p1_0112F.1_g055010 Hydrangea macrophylla HOM05D005842 ORTHO05D007077 6.0e-11 71.2 94 47.9
Dinv27137 Davidia involucrata HOM05D005842 ORTHO05D007077 2.3e-10 69.3 94 45.7
Carub.0007s2898 Capsella rubella HOM05D005842 ORTHO05D007077 3.0e-10 68.9 40 85.0
Migut.N00324 Erythranthe guttata HOM05D005842 ORTHO05D007077 3.9e-10 68.6 93 45.2
Prupe.1G053900 Prunus persica HOM05D005842 ORTHO05D007077 3.9e-10 68.6 93 44.1
PSO832G1240 Papaver somniferum HOM05D005842 ORTHO05D007077 1.9e-09 66.2 90 43.3
TAR633G2520 Trochodendron aralioides HOM05D005842 ORTHO05D007077 3.3e-09 65.5 90 43.3
CANSAT78G1061 Cannabis sativa HOM05D005842 ORTHO05D007077 4.8e-08 61.6 101 62.4
Rhsim09G0044300 Rhododendron simsii HOM05D005842 ORTHO05D007077 4.8e-08 61.6 41 70.7
SHI18628 Sapria himalayana HOM05D005842 ORTHO05D007077 1.8e-07 59.7 93 41.9
CANSAT78G1849 Cannabis sativa HOM05D005842 ORTHO05D007077 2.4e-07 59.3 93 62.4
ClCG05G003830 Citrullus lanatus HOM05D005842 ORTHO05D007077 3.1e-07 58.9 92 38.0
PGSC0003DMG400027164 Solanum tuberosum HOM05D005842 ORTHO05D007077 5.3e-07 58.2 94 39.4
Atru.chr13.2235 Acer truncatum HOM05D005842 ORTHO05D007077 6.9e-07 57.8 41 65.9
Oeu007544.1 Olea europaea HOM05D005842 ORTHO05D007077 6.9e-07 57.8 87 43.7
Glyma.10G130600 Glycine max HOM05D005842 ORTHO05D007077 9.0e-07 57.4 91 38.5
PGR142G0529 Punica granatum HOM05D005842 ORTHO05D007077 1.2e-06 57.0 40 67.5
Cfa014832 Carpinus fangiana HOM05D005842 ORTHO05D007077 1.5e-06 56.6 93 68.8
Glyma.20G081400 Glycine max HOM05D005842 ORTHO05D007077 1.5e-06 56.6 91 38.5
A07p08140 Brassica napus HOM05D005842 ORTHO05D007077 4.5e-06 55.1 30 86.7
C07p12280 Brassica napus HOM05D005842 ORTHO05D007077 4.5e-06 55.1 30 86.7
BolC7t41695H Brassica oleracea HOM05D005842 ORTHO05D007077 4.5e-06 55.1 30 86.7
BraA07t28597Z Brassica rapa HOM05D005842 ORTHO05D007077 4.5e-06 55.1 30 86.7
Lj6g0013781 Lotus japonicus HOM05D005842 ORTHO05D007077 4.5e-06 55.1 91 35.2
Nitab4.5_0001769g0190 Nicotiana tabacum HOM05D005842 ORTHO05D007077 4.5e-06 55.1 90 37.8
Ca_26210_v3 Cicer arietinum L. HOM05D005842 ORTHO05D007077 5.8e-06 54.7 92 34.8
Duzib151G0923 Durio zibethinus HOM05D005842 ORTHO05D007077 5.8e-06 54.7 35 77.1
Sabra10G0043900 Salix brachista HOM05D005842 ORTHO05D007077 7.6e-06 54.3 93 37.6


User provided reference genes

Program Settings