Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g09332 Brassica carinata HOM05D011985 ORTHO05D014050 1.5e-23 112.1 60 100.0
A04p07760 Brassica napus HOM05D011985 ORTHO05D014050 1.4e-21 105.5 60 95.0
BraA04t16468Z Brassica rapa HOM05D011985 ORTHO05D014050 1.4e-21 105.5 60 95.0
BolC4t25723H Brassica oleracea HOM05D011985 ORTHO05D014050 1.2e-20 102.4 60 93.3
Carub.0007s2797 Capsella rubella HOM05D011985 ORTHO05D014050 5.2e-16 87.0 57 80.7
A08p24360 Brassica napus HOM05D011985 ORTHO05D014050 8.9e-16 86.3 58 84.5
BcaC01g00204 Brassica carinata HOM05D011985 ORTHO05D014050 1.2e-15 85.9 58 84.5
C03p76850 Brassica napus HOM05D011985 ORTHO05D014050 1.2e-15 85.9 58 84.5
BolC3t19940H Brassica oleracea HOM05D011985 ORTHO05D014050 1.2e-15 85.9 58 84.5
BraA08t34391Z Brassica rapa HOM05D011985 ORTHO05D014050 1.2e-15 85.9 58 84.5
AT4G14315 Arabidopsis thaliana HOM05D011985 ORTHO05D014050 1.5e-15 85.5 57 78.9
BcaNung06102 Brassica carinata HOM05D011985 ORTHO05D014050 4.4e-15 84.0 59 79.7
CARHR220510 Cardamine hirsuta HOM05D011985 ORTHO05D014050 4.9e-14 80.5 56 75.0
AL7G41940 Arabidopsis lyrata HOM05D011985 ORTHO05D014050 2.0e-07 58.5 57 59.6
THA.LOC104822239 Tarenaya hassleriana HOM05D011985 ORTHO05D014050 8.4e-06 53.1 54 51.9


User provided reference genes

Program Settings