Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g09114 Brassica carinata HOM05D001498 ORTHO05D011506 4.2e-87 324.7 169 100.0
BcaC08g44373 Brassica carinata HOM05D001498 ORTHO05D011506 2.2e-80 302.4 169 92.9
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 3.2e-71 271.9 154 92.2
BolC2t11288H Brassica oleracea HOM05D001498 ORTHO05D011506 4.2e-71 271.6 154 92.9
C04p21380 Brassica napus HOM05D001498 ORTHO05D013028 2.1e-70 269.2 149 94.0
BcaC05g27519 Brassica carinata HOM05D001498 ORTHO05D011506 7.9e-70 267.3 168 85.1
C09p16580 Brassica napus HOM05D001498 ORTHO05D011506 1.4e-69 266.5 154 90.3
BcaC07g38657 Brassica carinata HOM05D001498 ORTHO05D011506 3.0e-69 265.4 151 92.7
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 3.0e-69 265.4 147 93.9
BolC9t54653H Brassica oleracea HOM05D001498 ORTHO05D011506 8.8e-69 263.8 149 91.9
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 1.1e-68 263.5 146 94.5
C02p52020 Brassica napus HOM05D001498 ORTHO05D011506 4.4e-68 261.5 150 91.3
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 5.7e-68 261.2 153 88.2
BolC1t03827H Brassica oleracea HOM05D001498 ORTHO05D011506 9.7e-68 260.4 154 89.0
BolC3t19484H Brassica oleracea HOM05D001498 ORTHO05D011506 1.2e-65 253.4 153 86.3
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 1.2e-65 253.4 150 88.7
C01p38680 Brassica napus HOM05D001498 ORTHO05D011506 4.5e-65 251.5 149 88.6
C02p53500 Brassica napus HOM05D001498 ORTHO05D001885 1.3e-64 250.0 148 88.5
BolC8t47367H Brassica oleracea HOM05D001498 ORTHO05D011506 1.7e-64 249.6 150 86.7
A08p07550 Brassica napus HOM05D001498 ORTHO05D011506 3.2e-63 245.4 154 85.7
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 2.1e-62 242.7 137 92.7
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 1.4e-61 240.0 150 84.7
BolC3t17911H Brassica oleracea HOM05D001498 ORTHO05D008559 3.0e-61 238.8 147 86.4
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 1.5e-60 236.5 153 82.4
BcaC05g25872 Brassica carinata HOM05D001498 ORTHO05D011506 2.6e-57 225.7 154 79.2
C03p66000 Brassica napus HOM05D001498 ORTHO05D001885 7.7e-57 224.2 144 84.7
C01p30560 Brassica napus HOM05D001498 ORTHO05D011506 8.5e-56 220.7 145 83.4
A08p09540 Brassica napus HOM05D001498 ORTHO05D011506 7.2e-55 217.6 145 80.0
A03p54380 Brassica napus HOM05D001498 ORTHO05D011506 9.4e-55 217.2 150 78.0
BcaC04g20364 Brassica carinata HOM05D001498 ORTHO05D011506 3.6e-54 215.3 160 76.9
A08p06060 Brassica napus HOM05D001498 ORTHO05D011506 3.6e-54 215.3 141 81.6
C03p66370 Brassica napus HOM05D001498 ORTHO05D011506 4.4e-52 208.4 118 94.9
BraA03t15290Z Brassica rapa HOM05D001498 ORTHO05D011506 7.5e-52 207.6 149 74.5
BolC1t02817H Brassica oleracea HOM05D001498 ORTHO05D106172 4.8e-51 204.9 150 77.3
C01p48970 Brassica napus HOM05D001498 ORTHO05D011506 1.4e-50 203.4 131 85.5
C09p21170 Brassica napus HOM05D001498 ORTHO05D011506 2.0e-49 199.5 149 75.2
BcaC02g10287 Brassica carinata HOM05D001498 ORTHO05D093229 3.5e-49 198.7 141 79.4
BcaC09g48967 Brassica carinata HOM05D001498 ORTHO05D011506 3.5e-49 198.7 117 91.5
BolC9t55019H Brassica oleracea HOM05D001498 ORTHO05D011506 5.9e-49 198.0 149 74.5
C06p31050 Brassica napus HOM05D001498 ORTHO05D011506 1.7e-48 196.4 118 90.7
BcaC02g09776 Brassica carinata HOM05D001498 ORTHO05D016036 1.1e-47 193.7 112 92.0
C09p27470 Brassica napus HOM05D001498 ORTHO05D011506 1.9e-47 193.0 118 88.1
C01p30520 Brassica napus HOM05D001498 ORTHO05D001885 5.5e-47 191.4 111 91.9
BcaB03g15933 Brassica carinata HOM05D001498 ORTHO05D021639 6.3e-43 177.9 136 72.1
BcaC04g19551 Brassica carinata HOM05D001498 ORTHO05D090991 1.0e-40 170.6 138 74.6
BcaB07g32352 Brassica carinata HOM05D001498 ORTHO05D021639 1.3e-40 170.2 133 72.9
BcaB04g18432 Brassica carinata HOM05D001498 ORTHO05D090882 6.1e-38 161.4 126 71.4
BcaB06g25739 Brassica carinata HOM05D001498 ORTHO05D093323 1.7e-35 153.3 120 72.5
BcaC01g03078 Brassica carinata HOM05D001498 ORTHO05D008559 4.9e-35 151.8 128 71.9
BcaB08g35076 Brassica carinata HOM05D001498 ORTHO05D021639 6.3e-35 151.4 116 75.0
BcaC08g44056 Brassica carinata HOM05D001498 ORTHO05D091470 1.1e-34 150.6 154 60.4
BcaC09g50109 Brassica carinata HOM05D001498 ORTHO05D093510 5.9e-33 144.8 141 64.5
BcaB08g35461 Brassica carinata HOM05D001498 ORTHO05D090491 2.9e-32 142.5 120 69.2
BcaB01g03187 Brassica carinata HOM05D001498 ORTHO05D090608 5.0e-32 141.7 111 70.3
BcaB05g23077 Brassica carinata HOM05D001498 ORTHO05D091436 6.6e-32 141.4 119 67.2
BcaB08g35016 Brassica carinata HOM05D001498 ORTHO05D092631 1.5e-31 140.2 125 64.0
BcaB07g33085 Brassica carinata HOM05D001498 ORTHO05D095625 2.5e-31 139.4 128 63.3
BcaB07g33315 Brassica carinata HOM05D001498 ORTHO05D091495 5.6e-31 138.3 111 68.5
BcaB06g26473 Brassica carinata HOM05D001498 ORTHO05D091656 2.1e-30 136.3 107 72.0
BcaB04g17678 Brassica carinata HOM05D001498 ORTHO05D094760 4.7e-30 135.2 129 62.0
BcaB06g26483 Brassica carinata HOM05D001498 ORTHO05D095599 1.4e-29 133.7 111 67.6
BcaB06g26755 Brassica carinata HOM05D001498 ORTHO05D092466 1.8e-29 133.3 94 77.7
BcaB04g17776 Brassica carinata HOM05D001498 ORTHO05D092868 4.4e-28 128.6 151 53.0
BcaB06g25736 Brassica carinata HOM05D001498 ORTHO05D021639 7.5e-28 127.9 85 81.2
BcaC03g14315 Brassica carinata HOM05D001498 ORTHO05D008559 2.9e-27 125.9 129 62.8
A01p28560 Brassica napus HOM05D001498 ORTHO05D021639 5.4e-26 121.7 70 91.4
BcaC06g36688 Brassica carinata HOM05D001498 ORTHO05D001885 7.0e-26 121.3 79 82.3
BcaB03g16497 Brassica carinata HOM05D001498 ORTHO05D008559 1.6e-25 120.2 117 65.8
BcaB03g16423 Brassica carinata HOM05D001498 ORTHO05D091575 2.7e-25 119.4 107 66.4
BcaB04g17703 Brassica carinata HOM05D001498 ORTHO05D021639 2.7e-25 119.4 94 72.3
BcaB01g01484 Brassica carinata HOM05D001498 ORTHO05D091615 1.7e-24 116.7 148 51.4
BcaB03g16152 Brassica carinata HOM05D001498 ORTHO05D093112 2.3e-24 116.3 113 62.8
BcaB04g18314 Brassica carinata HOM05D001498 ORTHO05D095953 8.6e-24 114.4 94 70.2
BcaB05g22943 Brassica carinata HOM05D001498 ORTHO05D096110 2.5e-23 112.8 84 71.4
BcaB05g23246 Brassica carinata HOM05D001498 ORTHO05D090900 9.5e-23 110.9 83 72.3
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 9.5e-23 110.9 147 50.3
BcaB05g23120 Brassica carinata HOM05D001498 ORTHO05D090647 1.1e-21 107.5 126 54.8
BcaB07g32913 Brassica carinata HOM05D001498 ORTHO05D091922 5.2e-21 105.1 134 53.7
BcaC03g13777 Brassica carinata HOM05D001498 ORTHO05D091916 1.2e-20 104.0 88 71.6
BcaB03g16298 Brassica carinata HOM05D001498 ORTHO05D095831 2.0e-20 103.2 113 59.3
BcaB03g16194 Brassica carinata HOM05D001498 ORTHO05D091006 1.7e-19 100.1 118 61.0
BcaB01g01309 Brassica carinata HOM05D001498 ORTHO05D091216 2.9e-19 99.4 74 71.6
BcaC04g22591 Brassica carinata HOM05D001498 ORTHO05D095898 2.9e-19 99.4 62 87.1
BcaB06g27027 Brassica carinata HOM05D001498 ORTHO05D092574 1.6e-17 93.6 90 64.4
BolC5t31266H Brassica oleracea HOM05D001498 ORTHO05D019959 6.0e-17 91.7 140 45.7
BcaB07g33754 Brassica carinata HOM05D001498 ORTHO05D092729 2.3e-16 89.7 68 67.6
BcaB07g33084 Brassica carinata HOM05D001498 ORTHO05D092207 8.6e-16 87.8 87 62.1
BcaB07g33217 Brassica carinata HOM05D001498 ORTHO05D093085 1.5e-15 87.0 85 61.2
BcaB06g26478 Brassica carinata HOM05D001498 ORTHO05D092859 1.9e-15 86.7 93 60.2
BcaB07g33220 Brassica carinata HOM05D001498 ORTHO05D096371 3.3e-15 85.9 103 55.3
BcaB05g23244 Brassica carinata HOM05D001498 ORTHO05D095601 9.5e-15 84.3 84 61.9
BcaC02g11926 Brassica carinata HOM05D001498 ORTHO05D019959 5.2e-13 78.6 109 45.9
BcaB06g27273 Brassica carinata HOM05D001498 ORTHO05D094467 1.2e-12 77.4 155 42.6
BcaB06g26727 Brassica carinata HOM05D001498 ORTHO05D093134 1.5e-12 77.0 154 41.6
BcaC09g51817 Brassica carinata HOM05D001498 ORTHO05D096326 4.4e-12 75.5 43 90.7
C07p38510 Brassica napus HOM05D001498 ORTHO05D100413 5.8e-12 75.1 40 92.5
BcaB02g11279 Brassica carinata HOM05D001498 ORTHO05D095830 7.5e-12 74.7 93 51.6
BcaB01g01816 Brassica carinata HOM05D001498 ORTHO05D091844 9.9e-12 74.3 146 43.8
BcaB02g11277 Brassica carinata HOM05D001498 ORTHO05D091891 9.9e-12 74.3 95 51.6
C09p42290 Brassica napus HOM05D001498 ORTHO05D016694 1.7e-11 73.6 81 51.9
BcaC06g35524 Brassica carinata HOM05D001498 ORTHO05D016694 3.7e-11 72.4 84 50.0
BolC9t57107H Brassica oleracea HOM05D001498 ORTHO05D016694 4.9e-11 72.0 81 50.6
BcaC05g27663 Brassica carinata HOM05D001498 ORTHO05D090842 6.4e-11 71.6 72 52.8
BcaC02g11068 Brassica carinata HOM05D001498 ORTHO05D016694 8.3e-11 71.2 84 51.2
BcaB05g22880 Brassica carinata HOM05D001498 ORTHO05D019959 1.6e-09 67.0 94 46.8
BcaC06g36329 Brassica carinata HOM05D001498 ORTHO05D096194 2.7e-09 66.2 153 37.9
C05p25290 Brassica napus HOM05D001498 ORTHO05D019959 2.7e-09 66.2 108 47.2
BcaB01g01185 Brassica carinata HOM05D001498 ORTHO05D019959 6.0e-09 65.1 113 43.4
BcaB07g33213 Brassica carinata HOM05D001498 ORTHO05D090837 1.3e-08 63.9 73 49.3
BolC4t23616H Brassica oleracea HOM05D001498 ORTHO05D016694 3.0e-08 62.8 168 35.7
BcaC04g20544 Brassica carinata HOM05D001498 ORTHO05D016694 3.9e-08 62.4 60 56.7
BcaC04g20545 Brassica carinata HOM05D001498 ORTHO05D016694 3.9e-08 62.4 72 50.0
C04p20860 Brassica napus HOM05D001498 ORTHO05D016694 3.9e-08 62.4 171 36.3
BcaB02g10765 Brassica carinata HOM05D001498 ORTHO05D095468 6.6e-08 61.6 75 50.7
BcaC05g26789 Brassica carinata HOM05D001498 ORTHO05D094205 1.9e-07 60.1 73 57.5
BcaB06g27205 Brassica carinata HOM05D001498 ORTHO05D091204 9.5e-07 57.8 105 42.9
BcaB02g11218 Brassica carinata HOM05D001224 ORTHO05D010571 2.8e-06 56.2 88 43.2


User provided reference genes

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