Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g09111 Brassica carinata HOM05D002776 ORTHO05D000395 1.2e-48 196.1 89 100.0
BcaC06g36448 Brassica carinata HOM05D002776 ORTHO05D003044 1.7e-26 122.5 76 81.6
BcaC08g43736 Brassica carinata HOM05D002776 ORTHO05D000395 1.7e-26 122.5 76 81.6
A01p26320 Brassica napus HOM05D002776 ORTHO05D000395 1.7e-26 122.5 76 81.6
C04p21360 Brassica napus HOM05D002776 ORTHO05D000395 1.7e-26 122.5 76 81.6
C04p56090 Brassica napus HOM05D002776 ORTHO05D003044 1.7e-26 122.5 76 81.6
C06p18050 Brassica napus HOM05D002776 ORTHO05D000395 1.7e-26 122.5 76 81.6
C08p17870 Brassica napus HOM05D002776 ORTHO05D000395 1.7e-26 122.5 76 81.6
C08p08860 Brassica napus HOM05D002776 ORTHO05D000395 2.2e-26 122.1 76 80.3
BcaC08g44371 Brassica carinata HOM05D002776 ORTHO05D003044 1.1e-25 119.8 76 80.3
BcaC09g48965 Brassica carinata HOM05D002776 ORTHO05D003044 1.1e-25 119.8 76 80.3
A01p20490 Brassica napus HOM05D002776 ORTHO05D000395 1.1e-25 119.8 76 80.3
A10p06820 Brassica napus HOM05D002776 ORTHO05D003044 1.1e-25 119.8 76 80.3
BraA07t28346Z Brassica rapa HOM05D002776 ORTHO05D000395 1.1e-25 119.8 76 80.3
BcaB06g26729 Brassica carinata HOM05D002776 ORTHO05D000395 1.4e-25 119.4 78 79.5
C09p19460 Brassica napus HOM05D002776 ORTHO05D003044 1.4e-25 119.4 75 80.0
C06p23340 Brassica napus HOM05D002776 ORTHO05D000395 1.8e-25 119.0 76 80.3
C09p28510 Brassica napus HOM05D002776 ORTHO05D000395 1.8e-25 119.0 76 80.3
A10p06580 Brassica napus HOM05D002776 ORTHO05D000395 4.1e-25 117.9 76 78.9
C09p16540 Brassica napus HOM05D002776 ORTHO05D011320 4.1e-25 117.9 76 78.9
BolC3t18911H Brassica oleracea HOM05D002776 ORTHO05D003044 4.1e-25 117.9 74 81.1
BolC8t49070H Brassica oleracea HOM05D002776 ORTHO05D011320 4.1e-25 117.9 74 81.1
BolC5t32217H Brassica oleracea HOM05D002776 ORTHO05D011320 5.3e-25 117.5 76 78.9
BcaC04g22429 Brassica carinata HOM05D002776 ORTHO05D011320 7.0e-25 117.1 76 78.9
A07p02060 Brassica napus HOM05D002776 ORTHO05D000395 2.0e-24 115.5 74 78.4
BraA03t14509Z Brassica rapa HOM05D002776 ORTHO05D000395 2.0e-24 115.5 77 76.6
BolC6t37507H Brassica oleracea HOM05D002776 ORTHO05D000395 4.5e-24 114.4 74 79.7
A01p28520 Brassica napus HOM05D002776 ORTHO05D000395 1.0e-23 113.2 76 75.0
BraA01t03052Z Brassica rapa HOM05D002776 ORTHO05D000395 1.0e-23 113.2 76 75.0
BolC6t36242H Brassica oleracea HOM05D002776 ORTHO05D000395 1.3e-23 112.8 74 79.7
C01p44950 Brassica napus HOM05D002776 ORTHO05D000395 1.7e-23 112.5 74 77.0
A09p33410 Brassica napus HOM05D002776 ORTHO05D000395 6.5e-23 110.5 74 78.4
BcaB03g16806 Brassica carinata HOM05D002776 ORTHO05D003044 8.5e-23 110.2 78 74.4
BcaB04g18118 Brassica carinata HOM05D002776 ORTHO05D000395 1.5e-22 109.4 76 76.3
BcaB05g22944 Brassica carinata HOM05D002776 ORTHO05D000395 2.5e-22 108.6 78 73.1
BcaB02g11313 Brassica carinata HOM05D002776 ORTHO05D000395 4.2e-22 107.8 78 73.1
BraA01t01977Z Brassica rapa HOM05D002776 ORTHO05D000395 8.8e-20 100.1 51 92.2
C01p48980 Brassica napus HOM05D002776 ORTHO05D003542 2.6e-19 98.6 88 62.5
BcaB01g03190 Brassica carinata HOM05D002776 ORTHO05D000395 3.4e-19 98.2 53 88.7
A05p28380 Brassica napus HOM05D002776 ORTHO05D003044 9.8e-19 96.7 89 60.7
A09p29650 Brassica napus HOM05D002776 ORTHO05D000395 9.8e-19 96.7 89 60.7
C01p30580 Brassica napus HOM05D002776 ORTHO05D003044 9.8e-19 96.7 89 60.7
C02p52040 Brassica napus HOM05D002776 ORTHO05D000395 9.8e-19 96.7 89 60.7
C03p65970 Brassica napus HOM05D002776 ORTHO05D000395 9.8e-19 96.7 89 60.7
C03p66380 Brassica napus HOM05D002776 ORTHO05D003044 9.8e-19 96.7 89 60.7
C04p41830 Brassica napus HOM05D002776 ORTHO05D000395 9.8e-19 96.7 89 60.7
BolC3t18858H Brassica oleracea HOM05D002776 ORTHO05D000395 9.8e-19 96.7 89 60.7
BraA09t38530Z Brassica rapa HOM05D002776 ORTHO05D000395 9.8e-19 96.7 89 60.7
BolC6t36736H Brassica oleracea HOM05D002776 ORTHO05D011320 3.7e-18 94.7 88 60.2
C03p75850 Brassica napus HOM05D002776 ORTHO05D000395 6.3e-18 94.0 89 59.6
BolC2t11290H Brassica oleracea HOM05D002776 ORTHO05D000395 8.3e-18 93.6 46 95.7
BraA03t15291Z Brassica rapa HOM05D002776 ORTHO05D000395 8.3e-18 93.6 46 95.7
BcaB01g01307 Brassica carinata HOM05D002776 ORTHO05D003044 1.1e-17 93.2 46 93.5
BcaC07g39108 Brassica carinata HOM05D002776 ORTHO05D000395 1.8e-17 92.4 46 93.5
C07p49090 Brassica napus HOM05D002776 ORTHO05D003044 1.8e-17 92.4 89 58.4
C02p53520 Brassica napus HOM05D002776 ORTHO05D003044 4.1e-17 91.3 87 59.8
BraA08t32835Z Brassica rapa HOM05D002776 ORTHO05D011320 4.1e-17 91.3 87 59.8
BraA09t40150Z Brassica rapa HOM05D002776 ORTHO05D011320 5.4e-17 90.9 87 58.6
C03p80450 Brassica napus HOM05D002776 ORTHO05D000395 2.0e-16 89.0 44 95.5
BcaB06g26484 Brassica carinata HOM05D002776 ORTHO05D000395 2.7e-16 88.6 78 64.1
C03p56210 Brassica napus HOM05D002776 ORTHO05D003044 4.5e-16 87.8 87 57.5
BraA09t38884Z Brassica rapa HOM05D002776 ORTHO05D000395 1.0e-15 86.7 87 58.6
C04p20840 Brassica napus HOM05D000675 ORTHO05D012331 2.5e-14 82.0 81 51.9
BolC4t23614H Brassica oleracea HOM05D000675 ORTHO05D012331 7.2e-14 80.5 81 50.6
C03p68610 Brassica napus HOM05D000675 ORTHO05D000395 1.2e-13 79.7 83 49.4
BolC3t19120H Brassica oleracea HOM05D000675 ORTHO05D000395 1.2e-13 79.7 83 49.4
Thhalv10012150m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 2.1e-13 79.0 72 55.6
Thhalv10010916m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 2.8e-13 78.6 75 53.3
BolC6t35536H Brassica oleracea HOM05D000675 ORTHO05D000395 3.6e-13 78.2 83 49.4
Thhalv10003381m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 8.0e-13 77.0 74 54.1
BraA08t32607Z Brassica rapa HOM05D002776 ORTHO05D000395 1.0e-12 76.6 36 94.4
Thhalv10000427m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 1.0e-12 76.6 74 52.7
Thhalv10027124m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 1.0e-12 76.6 74 52.7
BolC4t22590H Brassica oleracea HOM05D002776 ORTHO05D016111 1.4e-12 76.3 74 54.1
Thhalv10017554m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 1.4e-12 76.3 74 51.4
Thhalv10028107m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 1.4e-12 76.3 74 52.7
Thhalv10012169m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 1.8e-12 75.9 74 52.7
Thhalv10012269m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 1.8e-12 75.9 74 52.7
Thhalv10015767m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 1.8e-12 75.9 74 52.7
Thhalv10022987m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 1.8e-12 75.9 74 52.7
C05p42010 Brassica napus HOM05D000675 ORTHO05D000395 2.3e-12 75.5 79 54.4
Thhalv10019815m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 2.3e-12 75.5 74 51.4
Thhalv10026892m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 2.3e-12 75.5 74 52.7
Thhalv10009945m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 3.0e-12 75.1 74 51.4
Thhalv10029248m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 3.0e-12 75.1 74 52.7
Thhalv10022478m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 4.0e-12 74.7 74 51.4
Thhalv10024161m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 5.2e-12 74.3 74 51.4
Thhalv10010966m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 6.8e-12 73.9 74 50.0
Thhalv10024011m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 6.8e-12 73.9 74 51.4
C03p64930 Brassica napus HOM05D002776 ORTHO05D000395 8.9e-12 73.6 79 49.4
Thhalv10002818m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 8.9e-12 73.6 74 51.4
Thhalv10027299m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 8.9e-12 73.6 74 50.0
BolC3t18754H Brassica oleracea HOM05D002776 ORTHO05D000395 1.2e-11 73.2 79 49.4
Thhalv10010988m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 1.2e-11 73.2 74 51.4
Thhalv10023196m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 1.5e-11 72.8 74 51.4
C09p27490 Brassica napus HOM05D002776 ORTHO05D003044 2.0e-11 72.4 54 70.4
Thhalv10000594m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 2.0e-11 72.4 74 50.0
Thhalv10002246m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 2.0e-11 72.4 74 51.4
Thhalv10005322m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 2.0e-11 72.4 74 51.4
Thhalv10015567m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 2.0e-11 72.4 74 50.0
Thhalv10002262m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 2.6e-11 72.0 74 51.4
Thhalv10002833m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 2.6e-11 72.0 74 51.4
Thhalv10029459m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 2.6e-11 72.0 74 50.0
C07p06250 Brassica napus HOM05D000675 ORTHO05D000395 3.4e-11 71.6 75 52.0
BolC7t41043H Brassica oleracea HOM05D000675 ORTHO05D000395 4.4e-11 71.2 74 50.0
Thhalv10015721m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 4.4e-11 71.2 74 51.4
Thhalv10023833m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 4.4e-11 71.2 74 51.4
Thhalv10000708m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 5.7e-11 70.9 66 54.5
Thhalv10002344m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 5.7e-11 70.9 74 50.0
BcaC01g02374 Brassica carinata HOM05D002776 ORTHO05D003044 7.5e-11 70.5 45 77.8
BraA01t02479Z Brassica rapa HOM05D000675 ORTHO05D000395 7.5e-11 70.5 74 54.1
Thhalv10000600m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 9.8e-11 70.1 74 48.6
BcaC05g27135 Brassica carinata HOM05D001224 ORTHO05D010571 1.3e-10 69.7 74 54.1
BolC4t26388H Brassica oleracea HOM05D001224 ORTHO05D000395 1.7e-10 69.3 74 54.1
BolC1t04758H Brassica oleracea HOM05D000675 ORTHO05D000395 2.8e-10 68.6 74 52.7
Thhalv10012055m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 2.8e-10 68.6 62 54.8
BcaB01g02585 Brassica carinata HOM05D001224 ORTHO05D000395 3.7e-10 68.2 74 51.4
BcaC07g37040 Brassica carinata HOM05D001224 ORTHO05D010571 3.7e-10 68.2 74 52.7
A07p05870 Brassica napus HOM05D000675 ORTHO05D000395 3.7e-10 68.2 74 52.7
C05p37770 Brassica napus HOM05D000675 ORTHO05D000395 3.7e-10 68.2 74 51.4
Thhalv10002153m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 3.7e-10 68.2 73 49.3
Thhalv10029179m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 3.7e-10 68.2 74 51.4
BcaC02g11120 Brassica carinata HOM05D001224 ORTHO05D010571 4.9e-10 67.8 74 52.7
BraA01t01571Z Brassica rapa HOM05D000675 ORTHO05D000395 4.9e-10 67.8 74 51.4
AT1G31150 Arabidopsis thaliana HOM05D000675 ORTHO05D000395 6.3e-10 67.4 75 46.7
BraA07t28367Z Brassica rapa HOM05D000675 ORTHO05D000395 6.3e-10 67.4 74 52.7
BraSC37t46113Z Brassica rapa HOM05D000675 ORTHO05D000395 8.3e-10 67.0 74 52.7
Thhalv10001852m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 8.3e-10 67.0 74 50.0
C04p35160 Brassica napus HOM05D000675 ORTHO05D000395 1.1e-09 66.6 74 52.7
BolC7t41308H Brassica oleracea HOM05D000675 ORTHO05D000395 1.8e-09 65.9 74 52.7
AL446U10030 Arabidopsis lyrata HOM05D000675 ORTHO05D000395 2.4e-09 65.5 78 43.6
C07p01190 Brassica napus HOM05D001224 ORTHO05D000395 2.4e-09 65.5 74 51.4
BolC6t35441H Brassica oleracea HOM05D001224 ORTHO05D003542 3.1e-09 65.1 74 50.0
Thhalv10023185m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 3.1e-09 65.1 78 47.4
BraA06t25345Z Brassica rapa HOM05D000675 ORTHO05D000395 4.1e-09 64.7 74 50.0
Thhalv10003323m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 5.4e-09 64.3 73 46.6
A03p54430 Brassica napus HOM05D002776 ORTHO05D000395 7.0e-09 63.9 31 93.5
C05p45370 Brassica napus HOM05D000675 ORTHO05D000395 9.2e-09 63.5 74 51.4
Thhalv10002942m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 2.7e-08 62.0 70 51.4
Thhalv10002954m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 7.8e-08 60.5 71 45.1
Thhalv10000483m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 1.0e-07 60.1 51 56.9
BolC9t59175H Brassica oleracea HOM05D001224 ORTHO05D042117 1.3e-07 59.7 62 56.5
BcaB05g25287 Brassica carinata HOM05D003303 ORTHO05D003887 2.3e-07 58.9 85 45.9
BolC5t33259H Brassica oleracea HOM05D000675 ORTHO05D000395 2.3e-07 58.9 74 48.6
Thhalv10000523m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 2.3e-07 58.9 73 43.8
Thhalv10016067m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 8.6e-07 57.0 48 58.3
BcaC06g35068 Brassica carinata HOM05D002776 ORTHO05D012331 1.1e-06 56.6 75 40.0
C04p36700 Brassica napus HOM05D002776 ORTHO05D011320 1.1e-06 56.6 68 51.5
BolC3t19387H Brassica oleracea HOM05D001224 ORTHO05D016111 1.1e-06 56.6 72 45.8
BolC4t23819H Brassica oleracea HOM05D002776 ORTHO05D000395 1.1e-06 56.6 44 61.4
Sp3g28800 Schrenkiella parvula HOM05D000675 ORTHO05D000395 1.1e-06 56.6 77 42.9
A07p03370 Brassica napus HOM05D000675 ORTHO05D000395 1.5e-06 56.2 77 36.4
BolC2t08805H Brassica oleracea HOM05D002776 ORTHO05D000395 1.5e-06 56.2 32 78.1
BcaC06g35526 Brassica carinata HOM05D002776 ORTHO05D012331 1.9e-06 55.8 75 38.7
BolC8t46874H Brassica oleracea HOM05D000675 ORTHO05D000395 1.9e-06 55.8 76 39.5
BcaB02g10769 Brassica carinata HOM05D002776 ORTHO05D012331 2.5e-06 55.5 75 38.7
C04p65980 Brassica napus HOM05D000675 ORTHO05D000395 2.5e-06 55.5 75 34.7
BolC3t17251H Brassica oleracea HOM05D000675 ORTHO05D000395 3.3e-06 55.1 75 36.0
BcaC09g51819 Brassica carinata HOM05D001308 ORTHO05D001170 4.3e-06 54.7 42 69.0
A09p51440 Brassica napus HOM05D000675 ORTHO05D000395 4.3e-06 54.7 77 36.4
BraA10t43278Z Brassica rapa HOM05D000675 ORTHO05D000395 4.3e-06 54.7 77 36.4
Carub.0001s2955 Capsella rubella HOM05D000675 ORTHO05D000395 4.3e-06 54.7 84 41.7
Thhalv10002958m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 4.3e-06 54.7 46 58.7
AL1G45700 Arabidopsis lyrata HOM05D000675 ORTHO05D000395 5.6e-06 54.3 75 41.3
BcaB04g20306 Brassica carinata HOM05D000675 ORTHO05D000395 5.6e-06 54.3 77 39.0
BcaC01g03691 Brassica carinata HOM05D000675 ORTHO05D000395 5.6e-06 54.3 75 36.0
A10p13650 Brassica napus HOM05D000675 ORTHO05D000395 5.6e-06 54.3 76 39.5
C06p37640 Brassica napus HOM05D000675 ORTHO05D000395 5.6e-06 54.3 76 39.5
C06p46010 Brassica napus HOM05D000675 ORTHO05D000395 5.6e-06 54.3 77 36.4
BolC2t12302H Brassica oleracea HOM05D000675 ORTHO05D000395 5.6e-06 54.3 76 39.5
BraA07t31229Z Brassica rapa HOM05D000675 ORTHO05D000395 5.6e-06 54.3 76 39.5
BcaC03g18179 Brassica carinata HOM05D000675 ORTHO05D000395 7.3e-06 53.9 76 39.5
BolC4t28102H Brassica oleracea HOM05D000675 ORTHO05D000395 7.3e-06 53.9 77 35.1
BcaC05g28433 Brassica carinata HOM05D002776 ORTHO05D090778 9.5e-06 53.5 25 88.0


User provided reference genes

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