Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g09063 Brassica carinata HOM05D009579 ORTHO05D014125 4.2e-281 970.7 490 100.0
C04p37990 Brassica napus HOM05D009579 ORTHO05D014125 1.5e-249 865.9 430 100.0
BolC4t25373H Brassica oleracea HOM05D009579 ORTHO05D014125 8.9e-231 803.5 490 86.3
BolC3t12905H Brassica oleracea HOM05D009579 ORTHO05D014125 1.6e-224 782.7 490 84.3
C03p03660 Brassica napus HOM05D009579 ORTHO05D014125 2.3e-210 735.7 381 96.6
C01p19990 Brassica napus HOM05D009579 ORTHO05D014125 1.7e-181 639.8 416 81.0
BcaB03g16517 Brassica carinata HOM05D009579 ORTHO05D014125 2.9e-88 330.1 213 82.2
A08p01540 Brassica napus HOM05D009579 ORTHO05D014125 4.2e-87 326.2 208 81.7
BcaB01g03787 Brassica carinata HOM05D009579 ORTHO05D014125 2.6e-65 253.8 213 67.6
BolC9t53019H Brassica oleracea HOM05D009579 ORTHO05D014125 2.4e-58 230.7 140 80.7
C09p00850 Brassica napus HOM05D009579 ORTHO05D014125 5.3e-58 229.6 140 80.7
BolC3t14798H Brassica oleracea HOM05D009579 ORTHO05D014125 8.5e-56 222.2 140 79.3
BolC7t41296H Brassica oleracea HOM05D009579 ORTHO05D021934 4.8e-51 206.5 311 44.1
C07p08830 Brassica napus HOM05D009579 ORTHO05D021934 5.3e-50 203.0 311 44.1
C09p62140 Brassica napus HOM05D009579 ORTHO05D021934 3.8e-48 196.8 327 39.8
C09p62210 Brassica napus HOM05D009579 ORTHO05D021934 1.1e-47 195.3 320 41.2
BcaC07g40975 Brassica carinata HOM05D009579 ORTHO05D014125 6.3e-43 179.5 213 49.3
BcaC05g29762 Brassica carinata HOM05D009579 ORTHO05D092626 1.7e-40 171.4 336 39.9
C02p11010 Brassica napus HOM05D009579 ORTHO05D019922 2.2e-32 144.4 227 44.1
C09p48550 Brassica napus HOM05D009579 ORTHO05D019922 5.5e-31 139.8 222 44.6
BcaB03g16768 Brassica carinata HOM05D009579 ORTHO05D014125 7.2e-31 139.4 93 82.8
A04p33690 Brassica napus HOM05D015039 ORTHO05D011322 7.3e-15 86.3 172 39.5
BcaB02g07818 Brassica carinata HOM05D009579 ORTHO05D091475 9.5e-15 85.9 144 36.8
A03p51250 Brassica napus HOM05D009579 ORTHO05D021934 9.5e-15 85.9 141 39.7
BraA08t32204Z Brassica rapa HOM05D009579 ORTHO05D014125 2.8e-14 84.3 49 83.7
C03p83110 Brassica napus HOM05D015039 ORTHO05D011322 2.3e-13 81.3 204 34.8
BolC5t28809H Brassica oleracea HOM05D015039 ORTHO05D011322 4.0e-13 80.5 204 34.8
BcaC02g09916 Brassica carinata HOM05D009579 ORTHO05D092397 5.2e-13 80.1 100 45.0
BcaB03g15850 Brassica carinata HOM05D009579 ORTHO05D021934 3.4e-12 77.4 99 47.5
BcaC02g07321 Brassica carinata HOM05D008872 ORTHO05D011322 7.5e-12 76.3 300 30.7
BcaNung02292 Brassica carinata HOM05D000025 ORTHO05D000040 7.5e-12 76.3 246 30.5
BcaC04g22210 Brassica carinata HOM05D008872 ORTHO05D011322 9.8e-12 75.9 262 32.8
C02p46890 Brassica napus HOM05D008872 ORTHO05D032322 1.4e-10 72.0 285 30.5
C05p17110 Brassica napus HOM05D008872 ORTHO05D011322 5.4e-10 70.1 281 29.2
C03p17890 Brassica napus HOM05D008872 ORTHO05D011322 1.2e-09 68.9 172 37.2
BcaB04g20432 Brassica carinata HOM05D008872 ORTHO05D011322 7.8e-09 66.2 327 26.6
C06p03870 Brassica napus HOM05D015039 ORTHO05D000276 2.3e-08 64.7 148 33.1
BcaC05g30090 Brassica carinata HOM05D015039 ORTHO05D011322 5.0e-08 63.5 152 33.6
BolC9t57697H Brassica oleracea HOM05D009579 ORTHO05D019922 5.0e-08 63.5 98 48.0
BcaC08g43114 Brassica carinata HOM05D015039 ORTHO05D011322 6.6e-08 63.2 147 32.7
A04p29000 Brassica napus HOM05D013189 ORTHO05D027648 1.9e-07 61.6 75 48.0
A10p00120 Brassica napus HOM05D000174 ORTHO05D027648 1.9e-07 61.6 75 48.0
BraA10t42291Z Brassica rapa HOM05D000174 ORTHO05D027648 1.9e-07 61.6 75 48.0
BcaB07g33975 Brassica carinata HOM05D013189 ORTHO05D027648 2.5e-07 61.2 75 48.0
BcaC01g00092 Brassica carinata HOM05D008872 ORTHO05D032322 4.3e-07 60.5 204 28.9
C09p62250 Brassica napus HOM05D008872 ORTHO05D011322 5.6e-07 60.1 202 30.7
BcaC04g21648 Brassica carinata HOM05D009579 ORTHO05D092920 2.1e-06 58.2 106 34.9


User provided reference genes

Program Settings