Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g09042 Brassica carinata HOM05D004230 ORTHO05D007976 1.6e-246 855.9 530 100.0
BolC3t17847H Brassica oleracea HOM05D004230 ORTHO05D007976 9.4e-218 760.4 532 91.9
BolC2t08696H Brassica oleracea HOM05D004230 ORTHO05D007976 5.7e-183 644.8 341 96.2
BcaC03g15070 Brassica carinata HOM05D004230 ORTHO05D007976 2.2e-182 642.9 341 95.9
C07p50550 Brassica napus HOM05D004230 ORTHO05D007976 1.4e-176 623.6 503 76.5
BcaC05g28343 Brassica carinata HOM05D004230 ORTHO05D007976 9.2e-173 610.9 361 84.2
BraA01t02220Z Brassica rapa HOM05D004230 ORTHO05D007976 3.5e-172 609.0 545 78.0
BcaC08g43996 Brassica carinata HOM05D004230 ORTHO05D007976 2.0e-167 593.2 361 83.1
BcaB01g00472 Brassica carinata HOM05D004230 ORTHO05D007976 9.5e-154 547.7 361 78.4
C05p44100 Brassica napus HOM05D004230 ORTHO05D007976 1.2e-153 547.4 547 72.9
A06p33140 Brassica napus HOM05D004230 ORTHO05D007976 3.8e-142 509.2 356 98.6
BcaC05g25838 Brassica carinata HOM05D004230 ORTHO05D007976 5.6e-138 495.4 305 84.6
C06p14020 Brassica napus HOM05D004230 ORTHO05D007976 3.2e-125 453.0 361 68.7
BcaC01g03708 Brassica carinata HOM05D004230 ORTHO05D007976 4.8e-121 439.1 306 78.4
BolC8t50322H Brassica oleracea HOM05D004230 ORTHO05D007976 1.0e-118 431.4 357 65.3
BcaC07g36911 Brassica carinata HOM05D004230 ORTHO05D007976 6.5e-118 428.7 350 63.7
BcaB05g23135 Brassica carinata HOM05D004230 ORTHO05D007976 2.7e-116 423.3 381 58.3
BolC5t30511H Brassica oleracea HOM05D004230 ORTHO05D007976 2.2e-113 413.7 223 95.5
C07p48530 Brassica napus HOM05D004230 ORTHO05D007976 2.6e-111 406.8 377 59.7
BolC7t45361H Brassica oleracea HOM05D004230 ORTHO05D007976 5.9e-111 405.6 377 59.4
BcaC09g49286 Brassica carinata HOM05D004230 ORTHO05D007976 1.7e-105 387.5 302 66.9
BcaC03g16826 Brassica carinata HOM05D004230 ORTHO05D007976 2.5e-101 373.6 343 60.3
AT3G32904 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 5.5e-101 372.5 361 57.3
BcaB06g26529 Brassica carinata HOM05D004230 ORTHO05D007976 6.9e-96 355.5 240 78.8
C01p36620 Brassica napus HOM05D004230 ORTHO05D007976 3.4e-95 353.2 300 62.7
Carub.0007s3043 Capsella rubella HOM05D004230 ORTHO05D007976 5.3e-88 329.3 261 67.8
BraA09t39059Z Brassica rapa HOM05D004230 ORTHO05D007976 7.7e-87 325.5 560 51.1
BcaB07g32504 Brassica carinata HOM05D004230 ORTHO05D007976 2.9e-86 323.6 361 50.1
BcaC09g49449 Brassica carinata HOM05D004230 ORTHO05D007976 4.7e-84 316.2 298 58.7
BcaC09g52278 Brassica carinata HOM05D004230 ORTHO05D007976 4.4e-82 309.7 256 64.5
BolC1t02226H Brassica oleracea HOM05D004230 ORTHO05D007976 4.4e-82 309.7 256 64.5
BraA03t13046Z Brassica rapa HOM05D004230 ORTHO05D007976 1.7e-81 307.8 361 48.5
BolC4t28062H Brassica oleracea HOM05D004230 ORTHO05D007976 2.8e-81 307.0 252 65.1
BraA06t24715Z Brassica rapa HOM05D004230 ORTHO05D007976 2.8e-81 307.0 252 65.1
A09p35300 Brassica napus HOM05D004230 ORTHO05D007976 6.3e-81 305.8 381 48.3
A06p45730 Brassica napus HOM05D004230 ORTHO05D007976 1.3e-78 298.1 368 46.5
C01p40550 Brassica napus HOM05D004230 ORTHO05D007976 7.2e-77 292.4 245 63.7
A06p33150 Brassica napus HOM05D004230 ORTHO05D007976 1.6e-76 291.2 152 94.7
C08p29240 Brassica napus HOM05D004230 ORTHO05D027608 2.1e-76 290.8 277 59.9
Sp4g02630 Schrenkiella parvula HOM05D004230 ORTHO05D007976 2.7e-76 290.4 327 50.2
C07p53510 Brassica napus HOM05D004230 ORTHO05D027608 8.0e-76 288.9 277 59.2
BcaB04g18000 Brassica carinata HOM05D004230 ORTHO05D007976 1.8e-75 287.7 210 72.4
BcaB05g22709 Brassica carinata HOM05D004230 ORTHO05D007976 4.0e-75 286.6 536 38.2
AL8G19300 Arabidopsis lyrata HOM05D004230 ORTHO05D000037 6.8e-75 285.8 203 75.9
Sp3g24280 Schrenkiella parvula HOM05D004230 ORTHO05D007976 7.5e-74 282.3 360 48.1
BraA06t26555Z Brassica rapa HOM05D004230 ORTHO05D007976 3.7e-73 280.0 330 47.6
C01p22970 Brassica napus HOM05D004230 ORTHO05D007976 1.8e-72 277.7 236 63.1
Carub.0007s3042 Capsella rubella HOM05D004230 ORTHO05D007976 4.1e-72 276.6 252 62.3
C01p22920 Brassica napus HOM05D004230 ORTHO05D007976 1.2e-71 275.0 263 57.4
C04p52580 Brassica napus HOM05D004230 ORTHO05D007976 8.0e-68 262.3 230 61.3
BolC3t17228H Brassica oleracea HOM05D004230 ORTHO05D007976 1.4e-67 261.5 124 98.4
BolC6t36485H Brassica oleracea HOM05D004230 ORTHO05D007976 1.4e-67 261.5 373 45.3
BcaB07g32180 Brassica carinata HOM05D004230 ORTHO05D007976 1.3e-65 255.0 296 51.4
BolC8t50525H Brassica oleracea HOM05D004230 ORTHO05D027608 1.3e-65 255.0 251 58.6
BcaC07g39750 Brassica carinata HOM05D004230 ORTHO05D027608 6.3e-65 252.7 221 63.3
BcaB06g27526 Brassica carinata HOM05D004230 ORTHO05D007976 5.4e-64 249.6 337 44.2
Carub.0007s3044 Capsella rubella HOM05D004230 ORTHO05D007976 3.5e-63 246.9 310 48.7
BolC3t20713H Brassica oleracea HOM05D004230 ORTHO05D007976 2.3e-62 244.2 203 64.5
C05p40190 Brassica napus HOM05D004230 ORTHO05D007976 8.6e-62 242.3 310 44.8
AT3G30520 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 2.5e-61 240.7 277 49.8
BcaC05g28003 Brassica carinata HOM05D004230 ORTHO05D007976 2.5e-61 240.7 359 40.9
BolC5t32761H Brassica oleracea HOM05D004230 ORTHO05D007976 1.0e-59 235.3 302 44.4
C01p22890 Brassica napus HOM05D004230 ORTHO05D007976 3.7e-57 226.9 163 68.7
SpUn0171_0010 Schrenkiella parvula HOM05D004230 ORTHO05D007976 5.4e-56 223.0 257 50.6
C08p27070 Brassica napus HOM05D004230 ORTHO05D007976 6.0e-55 219.5 118 88.1
BolC1t03622H Brassica oleracea HOM05D004230 ORTHO05D007976 1.3e-54 218.4 206 57.8
Carub.0007s3045 Capsella rubella HOM05D004230 ORTHO05D007976 3.9e-54 216.9 200 60.0
BraA03t15403Z Brassica rapa HOM05D004230 ORTHO05D007976 9.5e-53 212.2 217 54.4
Carub.0012s0003 Capsella rubella HOM05D004230 ORTHO05D007976 3.6e-52 210.3 224 52.7
BraA06t26245Z Brassica rapa HOM05D004230 ORTHO05D007976 1.4e-51 208.4 103 97.1
AL5G11160 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 5.2e-51 206.5 167 61.1
C08p01070 Brassica napus HOM05D004230 ORTHO05D007976 1.5e-50 204.9 170 60.0
AT1G43720 Arabidopsis thaliana HOM05D004230 ORTHO05D018474 1.7e-49 201.4 254 46.5
BolC3t20706H Brassica oleracea HOM05D004230 ORTHO05D007976 4.9e-49 199.9 269 45.0
AL5G20550 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 6.0e-47 193.0 266 43.6
A03p38990 Brassica napus HOM05D004230 ORTHO05D007976 1.3e-46 191.8 319 42.3
AT1G35820 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 8.6e-46 189.1 381 34.6
Sp2g07590 Schrenkiella parvula HOM05D004230 ORTHO05D007976 1.2e-44 185.3 355 36.9
A06p20520 Brassica napus HOM05D004230 ORTHO05D007976 6.2e-44 183.0 221 52.0
AT3G42870 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 1.2e-42 178.7 232 45.3
BcaC02g08615 Brassica carinata HOM05D004230 ORTHO05D007976 2.6e-42 177.6 236 48.7
A03p63250 Brassica napus HOM05D004230 ORTHO05D007976 3.4e-42 177.2 166 59.0
Sp1g33580 Schrenkiella parvula HOM05D004230 ORTHO05D007976 2.2e-41 174.5 318 39.0
C03p27690 Brassica napus HOM05D004230 ORTHO05D007976 7.1e-40 169.5 138 60.1
C05p46300 Brassica napus HOM05D004230 ORTHO05D007976 2.3e-38 164.5 138 59.4
BolC5t33360H Brassica oleracea HOM05D004230 ORTHO05D007976 8.6e-38 162.5 144 56.9
C02p00010 Brassica napus HOM05D004230 ORTHO05D007976 1.2e-36 158.7 178 46.6
BraA06t25864Z Brassica rapa HOM05D004230 ORTHO05D018474 6.2e-36 156.4 235 43.4
AL7G46530 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 1.8e-35 154.8 115 67.0
BraA05t21003Z Brassica rapa HOM05D004230 ORTHO05D041249 8.9e-35 152.5 164 50.0
Sp5g19020 Schrenkiella parvula HOM05D004230 ORTHO05D007976 3.8e-33 147.1 275 38.5
AL7G44480 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 1.4e-32 145.2 173 46.8
CARHR145800 Cardamine hirsuta HOM05D004230 ORTHO05D007976 3.2e-32 144.1 255 37.3
BcaC06g34422 Brassica carinata HOM05D004230 ORTHO05D007976 4.6e-31 140.2 352 31.2
BolC2t12231H Brassica oleracea HOM05D004230 ORTHO05D018474 7.8e-31 139.4 150 47.3
BcaC02g08607 Brassica carinata HOM05D004230 ORTHO05D018474 5.1e-30 136.7 198 44.9
Carub.0005s0823 Capsella rubella HOM05D004230 ORTHO05D007976 6.2e-28 129.8 449 33.0
BraA10t43214Z Brassica rapa HOM05D004230 ORTHO05D007976 9.0e-27 125.9 111 54.1
Carub.0007s3014 Capsella rubella HOM05D004230 ORTHO05D007976 1.5e-26 125.2 202 41.1
BolC3t18593H Brassica oleracea HOM05D004230 ORTHO05D018474 4.9e-25 120.2 182 42.3
C08p27080 Brassica napus HOM05D004230 ORTHO05D042725 1.4e-24 118.6 262 50.4
AL8G23470 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 1.6e-23 115.2 74 71.6
BcaC01g02567 Brassica carinata HOM05D004230 ORTHO05D018474 3.5e-23 114.0 182 41.2
BolC8t46909H Brassica oleracea HOM05D004230 ORTHO05D007976 7.8e-23 112.8 107 54.2
BcaC09g49284 Brassica carinata HOM05D004230 ORTHO05D007976 8.7e-22 109.4 79 64.6
BolC4t26781H Brassica oleracea HOM05D004230 ORTHO05D018474 2.5e-21 107.8 173 42.8
BolC2t08058H Brassica oleracea HOM05D004230 ORTHO05D007976 3.3e-21 107.5 98 50.0
BolC7t42083H Brassica oleracea HOM05D004230 ORTHO05D007976 3.3e-21 107.5 98 50.0
C07p15900 Brassica napus HOM05D004230 ORTHO05D007976 7.3e-21 106.3 98 49.0
Sp3g29180 Schrenkiella parvula HOM05D004230 ORTHO05D007976 1.7e-17 95.1 175 34.9
AL1G50740 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 4.9e-17 93.6 89 61.8
C07p28690 Brassica napus HOM05D004230 ORTHO05D007976 6.4e-17 93.2 75 57.3
BolC7t43407H Brassica oleracea HOM05D004230 ORTHO05D007976 6.4e-17 93.2 75 57.3
C01p41050 Brassica napus HOM05D004230 ORTHO05D024011 1.1e-16 92.4 107 49.5
BolC1t04060H Brassica oleracea HOM05D004230 ORTHO05D024011 1.1e-16 92.4 107 49.5
BraA06t26246Z Brassica rapa HOM05D004230 ORTHO05D042725 1.1e-16 92.4 47 87.2
C03p27680 Brassica napus HOM05D004230 ORTHO05D007976 1.9e-16 91.7 153 39.9
C02p19260 Brassica napus HOM05D004230 ORTHO05D007976 4.2e-16 90.5 78 52.6
BolC4t25589H Brassica oleracea HOM05D004230 ORTHO05D007976 7.1e-16 89.7 47 91.5
BcaC03g18110 Brassica carinata HOM05D004230 ORTHO05D007976 1.2e-15 89.0 83 49.4
CARHR102540 Cardamine hirsuta HOM05D004230 ORTHO05D007976 3.5e-15 87.4 93 49.5
BcaC09g49346 Brassica carinata HOM05D004230 ORTHO05D024011 4.6e-15 87.0 146 39.7
AL3G43870 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 2.3e-14 84.7 79 48.1
BolC2t12233H Brassica oleracea HOM05D004230 ORTHO05D007976 2.3e-14 84.7 75 50.7
AT5G36080 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 3.0e-14 84.3 78 51.3
A05p20980 Brassica napus HOM05D004230 ORTHO05D041249 3.9e-14 84.0 164 37.8
AL6G45690 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 3.3e-13 80.9 79 46.8
A09p29770 Brassica napus HOM05D004230 ORTHO05D007976 5.6e-13 80.1 157 36.3
BolC5t33361H Brassica oleracea HOM05D004230 ORTHO05D007976 5.6e-13 80.1 72 55.6
Sp4g09110 Schrenkiella parvula HOM05D004230 ORTHO05D000563 2.1e-12 78.2 193 30.1
BolC3t20148H Brassica oleracea HOM05D004230 ORTHO05D007976 8.1e-12 76.3 70 51.4
BcaB05g22915 Brassica carinata HOM05D003348 ORTHO05D010016 5.8e-10 70.1 46 71.7
CARHR113870 Cardamine hirsuta HOM05D004230 ORTHO05D007976 2.2e-09 68.2 61 54.1
BcaC01g00380 Brassica carinata HOM05D004230 ORTHO05D007976 7.9e-07 59.7 55 45.5


User provided reference genes

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