Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g09034 Brassica carinata HOM05D001224 ORTHO05D001170 3.8e-45 184.9 124 100.0
C03p58280 Brassica napus HOM05D001224 ORTHO05D001170 2.1e-35 152.5 147 68.7
C04p47850 Brassica napus HOM05D001224 ORTHO05D010571 2.7e-35 152.1 147 68.0
C07p12000 Brassica napus HOM05D001224 ORTHO05D003542 2.7e-35 152.1 147 77.6
BolC4t26386H Brassica oleracea HOM05D001224 ORTHO05D003542 2.7e-35 152.1 147 68.0
C05p45400 Brassica napus HOM05D001224 ORTHO05D003542 6.1e-35 151.0 147 76.2
BcaC05g28453 Brassica carinata HOM05D001224 ORTHO05D003542 7.9e-35 150.6 147 64.6
BcaC09g48839 Brassica carinata HOM05D001224 ORTHO05D003542 2.3e-34 149.1 147 63.3
C01p45370 Brassica napus HOM05D001224 ORTHO05D001170 2.3e-34 149.1 147 63.3
A08p08840 Brassica napus HOM05D001224 ORTHO05D003542 3.9e-34 148.3 147 63.9
BolC9t59177H Brassica oleracea HOM05D001224 ORTHO05D003542 5.1e-34 147.9 147 62.6
C04p55400 Brassica napus HOM05D001224 ORTHO05D003542 8.8e-34 147.1 147 75.5
C05p27340 Brassica napus HOM05D001224 ORTHO05D001170 3.3e-33 145.2 115 74.8
BraA07t28368Z Brassica rapa HOM05D001224 ORTHO05D003542 3.3e-33 145.2 147 63.3
BcaC04g22673 Brassica carinata HOM05D001224 ORTHO05D001170 9.7e-33 143.7 147 62.6
BcaC08g43836 Brassica carinata HOM05D001224 ORTHO05D001170 2.2e-32 142.5 143 62.9
A07p05860 Brassica napus HOM05D001224 ORTHO05D010571 2.2e-32 142.5 147 62.6
C05p37790 Brassica napus HOM05D001224 ORTHO05D003542 2.2e-32 142.5 115 73.0
C07p06930 Brassica napus HOM05D001224 ORTHO05D003542 2.8e-32 142.1 147 62.6
C06p04840 Brassica napus HOM05D001224 ORTHO05D003542 1.8e-31 139.4 147 75.5
BcaC06g35692 Brassica carinata HOM05D001224 ORTHO05D003542 7.0e-31 137.5 147 74.1
C05p42030 Brassica napus HOM05D001224 ORTHO05D001170 5.9e-30 134.4 110 71.8
C05p36110 Brassica napus HOM05D001224 ORTHO05D003542 1.7e-29 132.9 110 72.7
C07p00680 Brassica napus HOM05D001224 ORTHO05D003542 3.8e-29 131.7 146 58.2
BcaC05g27785 Brassica carinata HOM05D001224 ORTHO05D003542 5.0e-29 131.3 76 89.5
BcaC02g11121 Brassica carinata HOM05D001224 ORTHO05D001170 6.1e-27 124.4 147 69.4
A10p08840 Brassica napus HOM05D001224 ORTHO05D003542 1.4e-26 123.2 110 68.2
BraSC37t46118Z Brassica rapa HOM05D001224 ORTHO05D001170 1.4e-26 123.2 110 68.2
C05p18360 Brassica napus HOM05D001224 ORTHO05D003542 1.1e-25 120.2 102 71.6
BcaB06g27206 Brassica carinata HOM05D001224 ORTHO05D001170 1.3e-24 116.7 114 76.3
BcaB07g33939 Brassica carinata HOM05D001224 ORTHO05D001170 1.3e-24 116.7 113 76.1
BcaB05g24222 Brassica carinata HOM05D001224 ORTHO05D001170 6.3e-24 114.4 114 77.2
BcaB01g02583 Brassica carinata HOM05D001224 ORTHO05D001170 9.1e-23 110.5 82 72.0
BcaC09g48602 Brassica carinata HOM05D001224 ORTHO05D001170 9.1e-23 110.5 96 70.8
BcaB05g23792 Brassica carinata HOM05D001224 ORTHO05D001170 1.2e-22 110.2 114 74.6
BcaB01g01039 Brassica carinata HOM05D001224 ORTHO05D001170 7.7e-22 107.5 106 77.4
BcaB01g01184 Brassica carinata HOM05D001224 ORTHO05D001170 6.5e-21 104.4 114 72.8
BcaC02g12295 Brassica carinata HOM05D001224 ORTHO05D003542 8.8e-18 94.0 147 48.3
BcaB02g11182 Brassica carinata HOM05D001224 ORTHO05D001170 2.6e-17 92.4 82 58.5
BcaB04g17594 Brassica carinata HOM05D001224 ORTHO05D001170 3.4e-17 92.0 79 60.8
BcaB04g16979 Brassica carinata HOM05D001224 ORTHO05D001170 1.7e-16 89.7 82 57.3
BcaB04g17487 Brassica carinata HOM05D001224 ORTHO05D001170 4.5e-14 81.6 112 64.3
BcaB02g10768 Brassica carinata HOM05D013880 ORTHO05D001170 1.1e-12 77.0 80 52.5
C03p71040 Brassica napus HOM05D001308 ORTHO05D001170 1.4e-10 70.1 80 48.8
BcaC05g27623 Brassica carinata HOM05D001224 ORTHO05D014499 5.7e-09 64.7 72 59.7
BcaC05g25880 Brassica carinata HOM05D001224 ORTHO05D018692 1.7e-08 63.2 42 85.7
BolC5t33263H Brassica oleracea HOM05D001224 ORTHO05D003542 2.8e-08 62.4 70 60.0
BolC1t03831H Brassica oleracea HOM05D001308 ORTHO05D001170 3.7e-08 62.0 68 48.5
BcaC06g36174 Brassica carinata HOM05D001224 ORTHO05D014499 8.3e-08 60.8 147 38.1
BolC2t09960H Brassica oleracea HOM05D001308 ORTHO05D001170 9.2e-07 57.4 59 50.8
C01p38750 Brassica napus HOM05D013880 ORTHO05D001170 5.9e-06 54.7 53 52.8


User provided reference genes

Program Settings