Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g08973 Brassica carinata HOM05D004296 ORTHO05D005045 1.3e-148 529.6 266 100.0
BolC4t26425H Brassica oleracea HOM05D004296 ORTHO05D005045 1.3e-148 529.6 266 100.0
C04p48320 Brassica napus HOM05D004296 ORTHO05D005045 1.6e-141 506.1 266 96.6
BraA04t17088Z Brassica rapa HOM05D004296 ORTHO05D005045 2.5e-118 429.1 270 83.7
A04p14410 Brassica napus HOM05D004296 ORTHO05D005045 6.1e-117 424.5 271 83.4
BcaB06g27609 Brassica carinata HOM05D004296 ORTHO05D005045 2.2e-111 406.0 268 80.6
Sp7g00660 Schrenkiella parvula HOM05D004296 ORTHO05D005045 1.3e-106 390.2 266 77.1
SpUn0010_0140 Schrenkiella parvula HOM05D004296 ORTHO05D005045 1.3e-106 390.2 266 77.1
Thhalv10028247m.g Eutrema salsugineum HOM05D004296 ORTHO05D005045 1.2e-91 340.5 266 71.1
Carub.0007s3425 Capsella rubella HOM05D004296 ORTHO05D005045 6.4e-90 334.7 268 71.6
AL7G48180 Arabidopsis lyrata HOM05D004296 ORTHO05D005045 4.9e-82 308.5 245 71.4
Thhalv10027895m.g Eutrema salsugineum HOM05D004296 ORTHO05D005045 6.4e-82 308.1 266 66.5
CARHR213060 Cardamine hirsuta HOM05D004296 ORTHO05D005045 7.1e-81 304.7 270 64.8
AT5G41270 Arabidopsis thaliana HOM05D004296 ORTHO05D005045 9.2e-81 304.3 271 67.5
Carub.0001s0729 Capsella rubella HOM05D004296 ORTHO05D005045 3.1e-68 262.7 267 61.0
Aa31LG9G640 Aethionema arabicum HOM05D004296 ORTHO05D005045 1.2e-64 250.8 269 55.0
THA.LOC104809392 Tarenaya hassleriana HOM05D004296 ORTHO05D005045 2.7e-56 223.0 281 49.1
Duzib068G1191 Durio zibethinus HOM05D004296 ORTHO05D005045 2.7e-48 196.4 273 47.6
Gohir.A05G299133 Gossypium hirsutum HOM05D004296 ORTHO05D005045 2.3e-47 193.4 254 44.5
Gorai.009G316100 Gossypium raimondii HOM05D004296 ORTHO05D005045 2.3e-47 193.4 254 44.5
Gohir.D05G298900 Gossypium hirsutum HOM05D004296 ORTHO05D005045 5.1e-47 192.2 254 44.1
COL.COLO4_34461 Corchorus olitorius HOM05D001502 ORTHO05D002950 1.4e-44 184.1 248 44.0
Cpa.g.sc45.44 Carica papaya HOM05D004296 ORTHO05D005045 6.9e-44 181.8 276 41.7
Thecc.03G278500 Theobroma cacao HOM05D004296 ORTHO05D005045 1.5e-43 180.6 271 43.5
Atru.chr9.2192 Acer truncatum HOM05D004296 ORTHO05D005045 1.0e-42 177.9 271 45.4
Hma1.2p1_0896F.1_g234000 Hydrangea macrophylla HOM05D004296 ORTHO05D005045 2.2e-42 176.8 297 41.8
Eucgr.D01846 Eucalyptus grandis HOM05D004296 ORTHO05D005045 8.4e-42 174.9 263 43.3
Cc10_g03910 Coffea canephora HOM05D004296 ORTHO05D005045 2.7e-40 169.9 244 43.9
Haze_22818 Corylus avellana HOM05D004296 ORTHO05D005045 4.6e-40 169.1 269 43.1
Dinv38945 Davidia involucrata HOM05D004296 ORTHO05D005045 1.0e-39 167.9 295 41.4
TAR375G1065 Trochodendron aralioides HOM05D004296 ORTHO05D005045 1.0e-39 167.9 282 41.8
TAR268G0002 Trochodendron aralioides HOM05D004296 ORTHO05D005045 3.9e-39 166.0 279 42.7
Phvul.005G126900 Phaseolus vulgaris HOM05D004296 ORTHO05D005045 5.1e-39 165.6 258 43.4
QL12p012797 Quercus lobata HOM05D004296 ORTHO05D005045 6.7e-39 165.2 267 42.7
Cfa013198 Carpinus fangiana HOM05D004296 ORTHO05D005045 1.1e-38 164.5 270 42.6
Sc01g0009550 Simmondsia chinensis HOM05D004296 ORTHO05D005045 1.9e-38 163.7 260 40.8
VMungo1080G1277 Vigna mungo HOM05D004296 ORTHO05D005045 4.3e-38 162.5 256 40.2
PGR031G2604 Punica granatum HOM05D004296 ORTHO05D005045 1.3e-37 161.0 210 43.8
Nn1g01503 Nelumbo nucifera HOM05D004296 ORTHO05D005045 1.6e-37 160.6 288 40.3
DCAR_000614 Daucus carota HOM05D004296 ORTHO05D005045 2.2e-37 160.2 275 38.5
CSS0030285 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 2.8e-37 159.8 300 36.7
RcHm_v2.0_Chr7g0197731 Rosa chinensis HOM05D004296 ORTHO05D005045 2.8e-37 159.8 278 38.5
Manes.01G061800 Manihot esculenta HOM05D004296 ORTHO05D005045 3.7e-37 159.5 263 41.4
FAN07G0166 Fragaria x ananassa HOM05D004296 ORTHO05D005045 1.1e-36 157.9 278 38.5
FAN04G1575 Fragaria x ananassa HOM05D004296 ORTHO05D005045 1.4e-36 157.5 280 37.9
Cpa.g.sc39.99 Carica papaya HOM05D004296 ORTHO05D005045 3.1e-36 156.4 143 55.2
TWI18G1338 Tripterygium wilfordii HOM05D004296 ORTHO05D005045 3.1e-36 156.4 263 41.4
FvH4_5g02380 Fragaria vesca HOM05D004296 ORTHO05D005045 5.3e-36 155.6 280 37.5
PSO782G5383 Papaver somniferum HOM05D004296 ORTHO05D005045 6.9e-36 155.2 306 36.9
TWI36G1592 Tripterygium wilfordii HOM05D004296 ORTHO05D005045 2.0e-35 153.7 264 39.8
Glyma.01G220000 Glycine max HOM05D004296 ORTHO05D005045 2.6e-35 153.3 294 40.1
Glyma.20G061500 Glycine max HOM05D004296 ORTHO05D005045 3.4e-35 152.9 264 41.7
MSTRG.11985 Avicennia marina HOM05D004296 ORTHO05D005045 7.6e-35 151.8 268 40.7
Lalb_Chr20g0109121 Lupinus albus HOM05D004296 ORTHO05D005045 1.0e-34 151.4 268 38.4
CSS0003782 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 1.3e-34 151.0 300 36.7
Migut.A00767 Erythranthe guttata HOM05D004296 ORTHO05D005045 1.3e-34 151.0 262 40.5
FAN12G3540 Fragaria x ananassa HOM05D004296 ORTHO05D005045 8.5e-34 148.3 274 39.8
Medtr0768s0010 Medicago truncatula HOM05D004296 ORTHO05D005045 8.5e-34 148.3 266 41.0
EL10Ac8g19045 Beta vulgaris HOM05D004296 ORTHO05D005045 1.1e-33 147.9 273 35.9
CiPaw.08G074700 Carya illinoinensis HOM05D004296 ORTHO05D005045 1.4e-33 147.5 296 37.5
FAN08G1593 Fragaria x ananassa HOM05D004296 ORTHO05D005045 2.5e-33 146.7 289 35.3
Phvul.002G157700 Phaseolus vulgaris HOM05D004296 ORTHO05D005045 2.5e-33 146.7 266 39.8
MBI18_g42175_MAGBIO Magnolia biondii HOM05D004296 ORTHO05D005045 3.2e-33 146.4 280 36.1
SalBow1G8718 Salvia bowleyana HOM05D004296 ORTHO05D005045 3.2e-33 146.4 272 36.0
Medtr6g011320 Medicago truncatula HOM05D004296 ORTHO05D005045 4.2e-33 146.0 262 39.3
Nitab4.5_0011683g0020 Nicotiana tabacum HOM05D004296 ORTHO05D005045 4.2e-33 146.0 314 36.6
Rhsim02G0231000 Rhododendron simsii HOM05D004296 ORTHO05D005045 4.2e-33 146.0 277 38.3
Lsat_1_v5_gn_6_87401 Lactuca sativa HOM05D004296 ORTHO05D005045 7.2e-33 145.2 248 39.9
CAN.G774.35 Capsicum annuum HOM05D004296 ORTHO05D005045 9.3e-33 144.8 309 35.6
Lsat_1_v5_gn_5_92680 Lactuca sativa HOM05D004296 ORTHO05D005045 9.3e-33 144.8 251 37.5
Peaxi162Scf00014g00082 Petunia axillaris HOM05D004296 ORTHO05D005045 9.3e-33 144.8 303 38.6
Actinidia02008 Actinidia chinensis HOM05D004296 ORTHO05D005045 1.2e-32 144.4 258 37.6
AUR62007249 Chenopodium quinoa HOM05D004296 ORTHO05D005045 2.1e-32 143.7 300 34.3
Sopen04g002480 Solanum pennellii HOM05D004296 ORTHO05D005045 2.1e-32 143.7 148 50.0
MSTRG.11987 Avicennia marina HOM05D004296 ORTHO05D005045 3.6e-32 142.9 266 39.5
CSS0037206 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 3.6e-32 142.9 290 36.9
Ah.12g054620 Amaranthus hybridus HOM05D004296 ORTHO05D005045 4.6e-32 142.5 329 34.7
Ciclev10002111m.g Citrus clementina HOM05D004296 ORTHO05D005045 4.6e-32 142.5 289 37.0
Peaxi162Scf00119g00828 Petunia axillaris HOM05D004296 ORTHO05D005045 6.1e-32 142.1 315 34.6
PGSC0003DMG400012342 Solanum tuberosum HOM05D004296 ORTHO05D005045 6.1e-32 142.1 148 49.3
TPR.G3981 Trifolium pratense HOM05D004296 ORTHO05D005045 6.1e-32 142.1 268 39.2
Solyc04g007420.4 Solanum lycopersicum HOM05D004296 ORTHO05D005045 1.0e-31 141.4 148 49.3
SGA_v2.0_scaffold96G28938 Striga asiatica HOM05D004296 ORTHO05D005045 2.3e-31 140.2 257 37.0
HanXRQChr03g0086731 Helianthus annuus HOM05D004296 ORTHO05D005045 5.1e-31 139.0 310 35.2
PGSC0003DMG403005999 Solanum tuberosum HOM05D004296 ORTHO05D005045 5.1e-31 139.0 148 49.3
LjContig00312_ERROPOS870357g0005117 Lotus japonicus HOM05D004296 ORTHO05D005045 6.7e-31 138.7 260 39.2
MD14G1104200 Malus domestica HOM05D004296 ORTHO05D005045 1.1e-30 137.9 140 55.0
HanXRQChr03g0086721 Helianthus annuus HOM05D004296 ORTHO05D005045 1.5e-30 137.5 309 35.3
PGSC0003DMG401005999 Solanum tuberosum HOM05D004296 ORTHO05D005045 1.9e-30 137.1 148 50.0
FAN12G1413 Fragaria x ananassa HOM05D004296 ORTHO05D005045 2.5e-30 136.7 280 36.1
Lj2A555T5 Lonicera japonica HOM05D004296 ORTHO05D005045 3.3e-30 136.3 148 46.6
Oeu009155.1 Olea europaea HOM05D004296 ORTHO05D005045 4.3e-30 136.0 293 32.4
Hund05589 Selenicereus undatus HOM05D004296 ORTHO05D005045 4.3e-30 136.0 263 38.8
Nitab4.5_0001615g0200 Nicotiana tabacum HOM05D004296 ORTHO05D005045 5.7e-30 135.6 316 35.1
ClCG07G008080 Citrullus lanatus HOM05D004296 ORTHO05D005045 9.7e-30 134.8 259 37.8
Lj8C228T3 Lonicera japonica HOM05D004296 ORTHO05D005045 9.7e-30 134.8 141 52.5
Prupe.5G099900 Prunus persica HOM05D004296 ORTHO05D005045 9.7e-30 134.8 371 31.5
Sopen08g029360 Solanum pennellii HOM05D004296 ORTHO05D005045 9.7e-30 134.8 150 48.0
PSO478G0046 Papaver somniferum HOM05D004296 ORTHO05D005045 2.2e-29 133.7 327 33.3
arahy.Tifrunner.gnm1.ann1.SKNY54 Arachis hypogaea HOM05D004296 ORTHO05D005045 2.8e-29 133.3 254 35.4
FAN17G1800 Fragaria x ananassa HOM05D004296 ORTHO05D005045 6.3e-29 132.1 280 33.6
FvH4_4g36830 Fragaria vesca HOM05D004296 ORTHO05D005045 8.2e-29 131.7 278 35.6
unitig_32.g11599 Utricularia gibba HOM05D004296 ORTHO05D005045 8.2e-29 131.7 268 36.6
Solyc08g081040.3 Solanum lycopersicum HOM05D004296 ORTHO05D005045 1.4e-28 131.0 148 47.3
Aqoxy3G03757 Aquilegia oxysepala HOM05D004296 ORTHO05D005045 1.8e-28 130.6 282 35.1
Potri.003G127200 Populus trichocarpa HOM05D004296 ORTHO05D005045 3.1e-28 129.8 151 49.0
SHI24854 Sapria himalayana HOM05D004296 ORTHO05D005045 3.1e-28 129.8 175 42.3
SalBow7G4152 Salvia bowleyana HOM05D004296 ORTHO05D005045 1.2e-27 127.9 218 38.5
Actinidia14560 Actinidia chinensis HOM05D004296 ORTHO05D005045 2.0e-27 127.1 293 35.8
PSO210G3801 Papaver somniferum HOM05D004296 ORTHO05D005045 2.0e-27 127.1 146 47.9
arahy.Tifrunner.gnm1.ann1.KQ253K Arachis hypogaea HOM05D004296 ORTHO05D005045 3.4e-27 126.3 254 34.3
Psat7g254600 Pisum sativum HOM05D004296 ORTHO05D005045 1.3e-26 124.4 215 40.5
Psat1g061240 Pisum sativum HOM05D004296 ORTHO05D005045 1.7e-26 124.0 140 50.7
TPR.G4254 Trifolium pratense HOM05D004296 ORTHO05D005045 1.7e-26 124.0 243 36.6
CsaV3_4G005960 Cucumis sativus L. HOM05D004296 ORTHO05D005045 2.9e-26 123.2 308 32.1
Sed0022715 Sechium edule HOM05D004296 ORTHO05D005045 5.0e-26 122.5 347 32.3
CDE01G0178 Ceratophyllum demersum HOM05D004296 ORTHO05D005045 6.5e-26 122.1 289 30.4
FAN07G0122 Fragaria x ananassa HOM05D004296 ORTHO05D005045 8.5e-26 121.7 292 31.8
Lalb_Chr09g0320981 Lupinus albus HOM05D004296 ORTHO05D005045 1.1e-25 121.3 139 44.6
Hund17074 Selenicereus undatus HOM05D004296 ORTHO05D005045 2.5e-25 120.2 245 38.4
CSS0027171 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 4.2e-25 119.4 180 42.8
MD07G1059600 Malus domestica HOM05D004296 ORTHO05D005045 4.2e-25 119.4 297 34.0
Aqoxy3G00118 Aquilegia oxysepala HOM05D004296 ORTHO05D005045 5.5e-25 119.0 283 33.6
ECA240G3612 Erigeron canadensis HOM05D004296 ORTHO05D005045 5.5e-25 119.0 165 41.8
CSS0028138 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 2.1e-24 117.1 180 41.7
Lj8A231T11 Lonicera japonica HOM05D004296 ORTHO05D005045 2.1e-24 117.1 369 29.5
QL05p087372 Quercus lobata HOM05D004296 ORTHO05D005045 2.1e-24 117.1 280 33.2
HPP92_021782 Vanilla planifolia HOM05D004296 ORTHO05D005045 2.1e-24 117.1 244 32.4
CAN.G1069.19 Capsicum annuum HOM05D004296 ORTHO05D005045 1.0e-23 114.8 116 49.1
MELO3C016352.2 Cucumis melo HOM05D004296 ORTHO05D005045 1.0e-23 114.8 309 31.7
CDE04G2006 Ceratophyllum demersum HOM05D004296 ORTHO05D005045 5.1e-23 112.5 286 29.0
Sed0002821 Sechium edule HOM05D004296 ORTHO05D005045 8.8e-23 111.7 270 34.1
Oeu020615.1 Olea europaea HOM05D004296 ORTHO05D005045 1.1e-22 111.3 312 29.8
arahy.Tifrunner.gnm1.ann1.CEX2YD Arachis hypogaea HOM05D004296 ORTHO05D005045 1.5e-22 110.9 129 45.7
ATR0680G148 Amborella trichopoda HOM05D004296 ORTHO05D005045 4.4e-22 109.4 274 32.5
AUR62018749 Chenopodium quinoa HOM05D004296 ORTHO05D005045 6.3e-21 105.5 144 42.4
arahy.Tifrunner.gnm1.ann1.W3QJXS Arachis hypogaea HOM05D004296 ORTHO05D005045 1.8e-20 104.0 232 33.6
Psat0s5346g0040 Pisum sativum HOM05D002378 ORTHO05D002936 2.4e-20 103.6 225 34.7
SEGI_21744 Sequoiadendron giganteum HOM05D004296 ORTHO05D005045 2.9e-18 96.7 240 30.8
FAN18G3255 Fragaria x ananassa HOM05D004296 ORTHO05D005045 1.4e-17 94.4 82 51.2
FAN13G2230 Fragaria x ananassa HOM05D004296 ORTHO05D005045 2.5e-17 93.6 132 42.4
PSO210G3847 Papaver somniferum HOM05D004296 ORTHO05D005045 1.2e-16 91.3 265 32.1
Rhsim02G0230400 Rhododendron simsii HOM05D004296 ORTHO05D005045 4.7e-16 89.4 244 34.4
Os01g0541600 Oryza sativa ssp. japonica HOM05D004296 ORTHO05D005045 1.0e-15 88.2 363 27.5
Rhsim02G0230900 Rhododendron simsii HOM05D004296 ORTHO05D005045 3.0e-15 86.7 190 37.4
Haze_21601 Corylus avellana HOM05D004296 ORTHO05D005045 5.2e-15 85.9 223 35.4
Zm00001eb162950 Zea mays HOM05D004296 ORTHO05D005045 2.0e-14 84.0 320 28.4
Nitab4.5_0003441g0080 Nicotiana tabacum HOM05D004296 ORTHO05D005045 4.4e-14 82.8 86 53.5
Mapoly0057s0058 Marchantia polymorpha HOM05D004296 ORTHO05D005045 5.3e-12 75.9 244 27.0
Sabra01G0078900 Salix brachista HOM05D004296 ORTHO05D005045 2.9e-10 70.1 255 29.4
Pp3c22_14200 Physcomitrium patens HOM05D004296 ORTHO05D005045 1.5e-09 67.8 132 36.4
Os01g0531000 Oryza sativa ssp. japonica HOM05D004296 ORTHO05D005045 2.1e-08 63.9 182 30.2
PGSC0003DMG402005999 Solanum tuberosum HOM05D004296 ORTHO05D005045 2.7e-08 63.5 71 45.1
Oeu009158.1 Olea europaea HOM05D004296 ORTHO05D005045 5.2e-07 59.3 74 47.3
AagrBONN_evm.TU.Sc2ySwM_228.2126 Anthoceros agrestis HOM05D004296 ORTHO05D005045 8.8e-07 58.5 141 31.9
CAN.G774.37 Capsicum annuum HOM05D001502 ORTHO05D002950 4.4e-06 56.2 57 49.1
ATR0680G137 Amborella trichopoda HOM05D004296 ORTHO05D005045 9.7e-06 55.1 222 27.0


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