Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g08909 Brassica carinata HOM05D010392 ORTHO05D000411 3.6e-62 241.5 132 100.0
BcaC05g27816 Brassica carinata HOM05D010392 ORTHO05D000411 1.6e-54 216.1 130 92.3
BcaC06g35493 Brassica carinata HOM05D010392 ORTHO05D000411 4.0e-53 211.5 130 90.8
BcaC07g39539 Brassica carinata HOM05D010392 ORTHO05D000411 2.2e-43 179.1 130 80.0
BcaC05g27417 Brassica carinata HOM05D000496 ORTHO05D000411 3.4e-36 155.2 97 89.7
BolC9t55084H Brassica oleracea HOM05D020706 ORTHO05D032392 8.2e-30 134.0 132 62.1
BcaC05g27902 Brassica carinata HOM05D000496 ORTHO05D000411 5.0e-27 124.8 136 61.0
BcaC04g21355 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-26 122.1 134 56.0
BcaC06g34944 Brassica carinata HOM05D020706 ORTHO05D032392 1.8e-21 106.3 132 53.8
BcaC07g37237 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-20 103.2 134 50.7
BcaB07g32484 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-16 89.7 114 53.5
BcaC06g36146 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-15 86.3 132 44.7
BcaC08g44104 Brassica carinata HOM05D010392 ORTHO05D000411 3.3e-15 85.5 134 44.8
BcaC09g50699 Brassica carinata HOM05D010392 ORTHO05D091246 7.4e-15 84.3 134 44.8
C07p21500 Brassica napus HOM05D020706 ORTHO05D032392 4.1e-13 78.6 91 56.0
BcaB04g17691 Brassica carinata HOM05D000496 ORTHO05D000411 7.0e-13 77.8 132 42.4
BcaB06g26647 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-11 73.6 135 37.8
BcaB08g35848 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-11 72.8 134 41.8
BcaB01g02810 Brassica carinata HOM05D000496 ORTHO05D000411 5.0e-11 71.6 133 37.6
BcaB06g26444 Brassica carinata HOM05D000496 ORTHO05D091650 2.7e-09 65.9 125 40.0
BcaB07g33930 Brassica carinata HOM05D062040 ORTHO05D090329 6.1e-09 64.7 102 43.1
BcaC05g28865 Brassica carinata HOM05D010392 ORTHO05D093960 1.0e-08 63.9 70 47.1
BcaB01g04370 Brassica carinata HOM05D010392 ORTHO05D090901 1.4e-08 63.5 116 40.5
BcaC02g10380 Brassica carinata HOM05D000496 ORTHO05D000411 3.0e-08 62.4 134 39.6
BcaC03g15984 Brassica carinata HOM05D000496 ORTHO05D000411 4.0e-08 62.0 136 37.5
BcaC05g28479 Brassica carinata HOM05D023072 ORTHO05D000411 4.0e-08 62.0 133 38.3
BcaC07g38782 Brassica carinata HOM05D000496 ORTHO05D000411 4.0e-08 62.0 137 38.0
BcaC02g08982 Brassica carinata HOM05D017621 ORTHO05D096350 6.7e-08 61.2 140 37.9
BcaB03g14222 Brassica carinata HOM05D000496 ORTHO05D000411 8.8e-08 60.8 114 39.5
BcaC01g00867 Brassica carinata HOM05D010392 ORTHO05D040019 8.8e-08 60.8 139 38.8
BcaC03g14607 Brassica carinata HOM05D000496 ORTHO05D031790 1.2e-07 60.5 130 36.9
BcaC02g10795 Brassica carinata HOM05D017621 ORTHO05D000411 1.5e-07 60.1 136 38.2
BcaC02g10796 Brassica carinata HOM05D017621 ORTHO05D091941 1.5e-07 60.1 136 38.2
BcaB01g02811 Brassica carinata HOM05D010392 ORTHO05D000411 2.0e-07 59.7 124 35.5
BcaC06g36099 Brassica carinata HOM05D010392 ORTHO05D000411 2.0e-07 59.7 148 36.5
BcaB08g35387 Brassica carinata HOM05D016022 ORTHO05D094590 2.6e-07 59.3 134 39.6
BolC3t20829H Brassica oleracea HOM05D010392 ORTHO05D040019 2.6e-07 59.3 139 38.1
A05p21370 Brassica napus HOM05D015634 ORTHO05D021759 4.4e-07 58.5 136 38.2
BraA05t21045Z Brassica rapa HOM05D015634 ORTHO05D021759 4.4e-07 58.5 136 38.2
BcaC02g09892 Brassica carinata HOM05D000496 ORTHO05D032642 5.7e-07 58.2 126 36.5
BolC7t41272H Brassica oleracea HOM05D000496 ORTHO05D000411 7.5e-07 57.8 145 34.5
BcaC06g35728 Brassica carinata HOM05D010392 ORTHO05D094910 9.7e-07 57.4 135 39.3
BcaC09g50172 Brassica carinata HOM05D025630 ORTHO05D032542 9.7e-07 57.4 149 33.6
BcaNung02816 Brassica carinata HOM05D000496 ORTHO05D000411 9.7e-07 57.4 126 42.9
BolC2t08741H Brassica oleracea HOM05D000496 ORTHO05D019920 1.3e-06 57.0 134 37.3
BcaC09g50802 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-06 56.6 128 34.4
BcaC03g15107 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-06 56.2 147 32.7
BcaC08g46179 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-06 56.2 96 38.5
BcaB07g32494 Brassica carinata HOM05D015634 ORTHO05D092495 2.8e-06 55.8 127 38.6
BcaC01g01965 Brassica carinata HOM05D000496 ORTHO05D000411 2.8e-06 55.8 81 44.4
BcaC02g07871 Brassica carinata HOM05D000496 ORTHO05D000411 2.8e-06 55.8 117 43.6
BcaC04g22204 Brassica carinata HOM05D000496 ORTHO05D000411 3.7e-06 55.5 104 37.5
BcaC09g48334 Brassica carinata HOM05D000496 ORTHO05D000411 3.7e-06 55.5 133 37.6
BcaB03g16153 Brassica carinata HOM05D000496 ORTHO05D000411 6.3e-06 54.7 137 38.7
BcaC06g36700 Brassica carinata HOM05D000496 ORTHO05D000411 6.3e-06 54.7 128 33.6
BcaC01g03089 Brassica carinata HOM05D000496 ORTHO05D000411 8.2e-06 54.3 139 38.1
BcaC04g21671 Brassica carinata HOM05D000496 ORTHO05D000411 8.2e-06 54.3 139 38.1


User provided reference genes

Program Settings