Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g08832 Brassica carinata HOM05D007568 ORTHO05D009779 5.1e-139 497.7 237 100.0
C03p18690 Brassica napus HOM05D007568 ORTHO05D009779 3.9e-99 365.2 237 76.4
A02p32020 Brassica napus HOM05D007568 ORTHO05D009779 1.1e-98 363.6 237 74.7
BraA02t08213Z Brassica rapa HOM05D007568 ORTHO05D009779 1.1e-98 363.6 237 74.7
C09p27130 Brassica napus HOM05D007568 ORTHO05D009779 3.3e-98 362.1 237 75.5
BolC9t55448H Brassica oleracea HOM05D007568 ORTHO05D009779 9.7e-98 360.5 237 75.5
BcaC01g06154 Brassica carinata HOM05D007568 ORTHO05D009779 1.6e-97 359.8 245 74.3
BolC3t14260H Brassica oleracea HOM05D007568 ORTHO05D009779 1.1e-96 357.1 237 75.1
BcaNung01428 Brassica carinata HOM05D007568 ORTHO05D009779 6.5e-70 268.1 154 85.7
BcaB02g11011 Brassica carinata HOM05D007568 ORTHO05D009779 2.5e-61 239.6 224 56.2
BolC4t25354H Brassica oleracea HOM05D007568 ORTHO05D009779 2.0e-47 193.4 241 42.3
A05p27540 Brassica napus HOM05D007568 ORTHO05D009779 1.7e-46 190.3 242 41.7
C02p26050 Brassica napus HOM05D007568 ORTHO05D009779 3.3e-45 186.0 242 40.9
A08p24970 Brassica napus HOM05D007568 ORTHO05D009779 5.6e-45 185.3 243 44.9
BcaB07g31875 Brassica carinata HOM05D007568 ORTHO05D009779 1.5e-42 177.2 249 40.2
C02p26010 Brassica napus HOM05D007568 ORTHO05D009779 1.5e-42 177.2 205 45.4
BcaB05g25263 Brassica carinata HOM05D007568 ORTHO05D009779 2.6e-42 176.4 247 40.5
A03p66230 Brassica napus HOM05D007568 ORTHO05D009779 1.9e-40 170.2 227 40.5
BraA09t40709Z Brassica rapa HOM05D007568 ORTHO05D009779 5.4e-40 168.7 231 39.8
BcaC01g01043 Brassica carinata HOM05D007568 ORTHO05D009779 3.5e-39 166.0 218 45.9
C01p17360 Brassica napus HOM05D007568 ORTHO05D009779 2.1e-36 156.8 229 36.7
BcaB04g18340 Brassica carinata HOM05D007568 ORTHO05D009779 3.6e-36 156.0 220 40.0
C03p86040 Brassica napus HOM05D007568 ORTHO05D009779 4.7e-36 155.6 229 36.7
BcaB04g18026 Brassica carinata HOM05D007568 ORTHO05D009779 5.8e-34 148.7 189 45.5
BcaB08g34629 Brassica carinata HOM05D007568 ORTHO05D009779 3.7e-33 146.0 238 37.0
C07p00760 Brassica napus HOM05D007568 ORTHO05D009779 6.4e-33 145.2 237 34.2
BraA03t15678Z Brassica rapa HOM05D007568 ORTHO05D009779 8.3e-33 144.8 180 43.3
BolC4t26648H Brassica oleracea HOM05D007568 ORTHO05D009779 5.1e-30 135.6 169 43.8
BcaB04g20792 Brassica carinata HOM05D007568 ORTHO05D009779 2.4e-24 116.7 250 32.4
A07p36520 Brassica napus HOM05D007568 ORTHO05D009779 2.4e-24 116.7 218 34.4
BolC8t47055H Brassica oleracea HOM05D007568 ORTHO05D009779 3.2e-24 116.3 61 85.2
BcaB05g24631 Brassica carinata HOM05D007568 ORTHO05D009779 9.2e-24 114.8 169 38.5
BolC4t24150H Brassica oleracea HOM05D000353 ORTHO05D000174 9.2e-24 114.8 144 43.8
BolC7t45261H Brassica oleracea HOM05D007568 ORTHO05D009779 3.9e-22 109.4 136 39.7
BcaC09g50463 Brassica carinata HOM05D007568 ORTHO05D009779 3.3e-21 106.3 136 39.0
BcaC05g26582 Brassica carinata HOM05D007568 ORTHO05D009779 9.6e-21 104.8 136 40.4
C01p25160 Brassica napus HOM05D030822 ORTHO05D009779 2.8e-20 103.2 136 37.5
A03p65180 Brassica napus HOM05D007568 ORTHO05D009779 8.1e-20 101.7 74 59.5
BraA03t15576Z Brassica rapa HOM05D007568 ORTHO05D009779 1.1e-19 101.3 73 58.9
A04p34410 Brassica napus HOM05D007568 ORTHO05D009779 2.4e-19 100.1 141 36.2
A03p66080 Brassica napus HOM05D007568 ORTHO05D009779 9.9e-18 94.7 228 28.1
A05p17030 Brassica napus HOM05D007568 ORTHO05D009779 9.9e-18 94.7 228 28.1
C09p36930 Brassica napus HOM05D007568 ORTHO05D009779 1.3e-17 94.4 134 35.8
BolC9t56523H Brassica oleracea HOM05D007568 ORTHO05D009779 1.3e-17 94.4 134 35.8
A01p06890 Brassica napus HOM05D007568 ORTHO05D009779 2.9e-17 93.2 228 27.6
BolC8t51027H Brassica oleracea HOM05D007568 ORTHO05D009779 3.8e-17 92.8 228 28.1
BcaC09g50027 Brassica carinata HOM05D007568 ORTHO05D009779 1.9e-16 90.5 78 51.3
BolC4t23434H Brassica oleracea HOM05D007568 ORTHO05D009779 5.4e-16 89.0 89 49.4
C03p85880 Brassica napus HOM05D007568 ORTHO05D009779 1.2e-15 87.8 138 39.1
C06p20120 Brassica napus HOM05D007568 ORTHO05D009779 1.2e-15 87.8 144 34.0
C03p18140 Brassica napus HOM05D007568 ORTHO05D009779 1.0e-14 84.7 147 34.7
C04p16590 Brassica napus HOM05D030822 ORTHO05D009779 1.3e-14 84.3 106 36.8
BcaC01g00913 Brassica carinata HOM05D007568 ORTHO05D009779 6.6e-14 82.0 117 41.0
BcaB08g34681 Brassica carinata HOM05D009963 ORTHO05D009779 1.1e-13 81.3 70 47.1
AL9U11480 Arabidopsis lyrata HOM05D000353 ORTHO05D011313 1.5e-13 80.9 232 25.4
BolC2t09295H Brassica oleracea HOM05D007568 ORTHO05D009779 1.5e-13 80.9 116 37.1
BolC6t36043H Brassica oleracea HOM05D007568 ORTHO05D009779 1.9e-13 80.5 79 43.0
AL1G50720 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.5e-13 80.1 222 25.2
AL5G12730 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.5e-13 80.1 222 25.2
AL8G21940 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 7.3e-13 78.6 222 25.2
BcaNung06627 Brassica carinata HOM05D007568 ORTHO05D009779 7.3e-13 78.6 72 48.6
BolC2t10349H Brassica oleracea HOM05D007568 ORTHO05D009779 1.3e-12 77.8 211 26.1
Thhalv10027364m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.6e-12 77.4 245 26.5
A07p36560 Brassica napus HOM05D000353 ORTHO05D000174 4.8e-12 75.9 242 24.4
Thhalv10000133m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 4.8e-12 75.9 245 27.3
A07p20380 Brassica napus HOM05D007568 ORTHO05D009779 6.2e-12 75.5 70 47.1
Carub.0007s3602 Capsella rubella HOM05D000353 ORTHO05D000174 1.4e-11 74.3 232 25.9
BolC5t34087H Brassica oleracea HOM05D007568 ORTHO05D009779 1.8e-11 73.9 67 49.3
C03p28750 Brassica napus HOM05D007568 ORTHO05D041881 5.3e-11 72.4 99 37.4
BolC3t15795H Brassica oleracea HOM05D007568 ORTHO05D041881 5.3e-11 72.4 99 37.4
AL2G19910 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.9e-11 72.0 234 22.6
AL5G12720 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.2e-10 71.2 234 22.6
AL6G41910 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.2e-10 71.2 234 22.6
AL2G22240 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.8e-10 68.9 234 22.6
BolC8t47824H Brassica oleracea HOM05D000353 ORTHO05D000174 5.8e-10 68.9 170 25.3
Thhalv10029348m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 5.8e-10 68.9 238 23.9
BcaB05g23080 Brassica carinata HOM05D009963 ORTHO05D013780 7.6e-10 68.6 70 44.3
BcaB07g30022 Brassica carinata HOM05D007568 ORTHO05D009779 7.6e-10 68.6 125 35.2
BraA09t40707Z Brassica rapa HOM05D000353 ORTHO05D000174 7.6e-10 68.6 241 22.4
A03p66100 Brassica napus HOM05D000353 ORTHO05D000174 1.3e-09 67.8 241 22.4
AL9U11490 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.7e-09 67.4 234 21.4
A10p31040 Brassica napus HOM05D000353 ORTHO05D000174 3.8e-09 66.2 241 24.5
BcaC02g09404 Brassica carinata HOM05D007568 ORTHO05D009779 4.9e-09 65.9 61 47.5
C03p19550 Brassica napus HOM05D007568 ORTHO05D009779 4.9e-09 65.9 85 37.6
BolC8t50060H Brassica oleracea HOM05D007568 ORTHO05D009779 4.9e-09 65.9 143 28.7
Carub.0002s1156 Capsella rubella HOM05D011333 ORTHO05D011313 8.4e-09 65.1 250 24.0
C05p33950 Brassica napus HOM05D000353 ORTHO05D000174 1.1e-08 64.7 241 24.5
BolC1t05940H Brassica oleracea HOM05D007568 ORTHO05D027567 1.1e-08 64.7 84 44.0
C04p16570 Brassica napus HOM05D000353 ORTHO05D000174 1.4e-08 64.3 241 24.5
C04p26530 Brassica napus HOM05D000353 ORTHO05D000174 1.4e-08 64.3 144 31.9
BolC2t08345H Brassica oleracea HOM05D000353 ORTHO05D000174 1.4e-08 64.3 241 24.5
BolC7t45258H Brassica oleracea HOM05D000353 ORTHO05D000174 1.4e-08 64.3 241 24.5
BolC4t23333H Brassica oleracea HOM05D007568 ORTHO05D009779 1.9e-08 63.9 143 32.9
BcaB02g11540 Brassica carinata HOM05D011625 ORTHO05D013783 3.2e-08 63.2 108 35.2
BcaC09g47669 Brassica carinata HOM05D007568 ORTHO05D027567 3.2e-08 63.2 156 30.8
A09p28960 Brassica napus HOM05D007568 ORTHO05D009779 3.2e-08 63.2 142 31.7
BraA09t38460Z Brassica rapa HOM05D007568 ORTHO05D009779 3.2e-08 63.2 142 31.7
AL8G20950 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.4e-08 62.4 227 21.6
BcaC01g02309 Brassica carinata HOM05D007568 ORTHO05D009779 7.1e-08 62.0 134 31.3
BcaC01g02319 Brassica carinata HOM05D007568 ORTHO05D009779 9.3e-08 61.6 134 32.1
Carub.0007s3522 Capsella rubella HOM05D000353 ORTHO05D000174 9.3e-08 61.6 232 23.7
A05p18670 Brassica napus HOM05D007568 ORTHO05D009779 1.2e-07 61.2 69 46.4
A01p26990 Brassica napus HOM05D000353 ORTHO05D000174 1.6e-07 60.8 235 23.0
A05p27520 Brassica napus HOM05D000353 ORTHO05D000174 1.6e-07 60.8 243 22.6
C02p26060 Brassica napus HOM05D000353 ORTHO05D000174 2.1e-07 60.5 243 22.6
Carub.0003s3392 Capsella rubella HOM05D000353 ORTHO05D000174 2.1e-07 60.5 237 20.7
C01p49430 Brassica napus HOM05D007568 ORTHO05D009779 3.5e-07 59.7 58 44.8
C04p22790 Brassica napus HOM05D007568 ORTHO05D027567 4.6e-07 59.3 83 39.8
A07p20350 Brassica napus HOM05D000353 ORTHO05D000174 1.3e-06 57.8 234 23.1
A03p30400 Brassica napus HOM05D000353 ORTHO05D000174 1.7e-06 57.4 234 23.1
BraA02t07226Z Brassica rapa HOM05D000353 ORTHO05D000174 1.7e-06 57.4 231 23.4
BcaB06g28316 Brassica carinata HOM05D000353 ORTHO05D000174 2.3e-06 57.0 236 20.8
AL2G19920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 3.0e-06 56.6 113 31.0
AL2G22250 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 3.0e-06 56.6 113 31.0
AL4G20710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 3.0e-06 56.6 113 31.0
AL6G41920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 3.0e-06 56.6 113 31.0
AL9U11500 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 3.0e-06 56.6 113 31.0
A03p30410 Brassica napus HOM05D000353 ORTHO05D000174 3.0e-06 56.6 234 23.1
AL5G12710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 5.1e-06 55.8 113 30.1


User provided reference genes

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