Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g08694 Brassica carinata HOM05D036454 ORTHO05D032073 2.8e-73 278.5 136 100.0
C04p51640 Brassica napus HOM05D036454 ORTHO05D032073 7.6e-63 243.8 117 100.0
BolC4t26744H Brassica oleracea HOM05D036454 ORTHO05D032073 8.1e-57 223.8 119 92.4
AL1G65410 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 7.0e-08 61.2 86 36.0
Thhalv10004132m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 4.5e-07 58.5 86 36.0
C07p63270 Brassica napus HOM05D000249 ORTHO05D000206 1.3e-06 57.0 130 29.2
Sp1g30030 Schrenkiella parvula HOM05D000249 ORTHO05D000206 1.3e-06 57.0 71 40.8
Sp5g19690 Schrenkiella parvula HOM05D000249 ORTHO05D000206 1.7e-06 56.6 119 32.8
AL8G13050 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 2.2e-06 56.2 86 40.7
BcaC07g41124 Brassica carinata HOM05D000249 ORTHO05D000206 2.2e-06 56.2 77 42.9
BolC8t51690H Brassica oleracea HOM05D000249 ORTHO05D000206 2.2e-06 56.2 77 42.9
Sp1g28120 Schrenkiella parvula HOM05D000249 ORTHO05D000206 2.2e-06 56.2 109 32.1
Sp1g28130 Schrenkiella parvula HOM05D000249 ORTHO05D000206 3.8e-06 55.5 87 35.6
AL34U10100 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 5.0e-06 55.1 79 32.9
AL8G22340 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 5.0e-06 55.1 79 32.9
Sp7g36590 Schrenkiella parvula HOM05D000249 ORTHO05D000206 5.0e-06 55.1 69 39.1
AT2G29860 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 6.5e-06 54.7 93 29.0
A04p22840 Brassica napus HOM05D000249 ORTHO05D000206 6.5e-06 54.7 81 33.3


User provided reference genes

Program Settings