Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g08685 Brassica carinata HOM05D003348 ORTHO05D010016 2.0e-221 772.3 438 100.0
BcaB07g33116 Brassica carinata HOM05D003348 ORTHO05D010016 1.2e-165 587.0 529 65.6
BcaB07g33152 Brassica carinata HOM05D003348 ORTHO05D010016 2.6e-141 506.1 470 66.4
BcaB03g16334 Brassica carinata HOM05D003348 ORTHO05D010016 1.8e-134 483.4 456 70.4
BcaB01g01113 Brassica carinata HOM05D003348 ORTHO05D010016 9.1e-126 454.5 505 59.0
BcaB05g22915 Brassica carinata HOM05D003348 ORTHO05D010016 7.2e-115 418.3 439 61.3
BcaB03g16335 Brassica carinata HOM05D003348 ORTHO05D010016 2.9e-108 396.4 331 69.8
BcaB07g32279 Brassica carinata HOM05D003348 ORTHO05D010016 5.0e-108 395.6 426 60.8
C09p43770 Brassica napus HOM05D003348 ORTHO05D010016 3.2e-107 392.9 534 49.8
BcaC07g42527 Brassica carinata HOM05D003348 ORTHO05D009907 1.0e-105 387.9 379 62.3
BcaC02g11615 Brassica carinata HOM05D003348 ORTHO05D010016 4.1e-102 375.9 399 59.1
BolC9t57261H Brassica oleracea HOM05D003348 ORTHO05D010016 1.2e-101 374.4 534 48.9
BcaB06g26670 Brassica carinata HOM05D003348 ORTHO05D010016 2.8e-98 363.2 495 54.1
BcaB04g19403 Brassica carinata HOM05D003348 ORTHO05D010016 8.9e-89 331.6 477 48.6
BolC1t02733H Brassica oleracea HOM05D003348 ORTHO05D010016 1.0e-84 318.2 483 47.4
BcaC04g20417 Brassica carinata HOM05D003348 ORTHO05D010016 1.7e-84 317.4 304 63.8
C06p29220 Brassica napus HOM05D003348 ORTHO05D010016 7.3e-83 312.0 475 47.6
C07p09080 Brassica napus HOM05D003348 ORTHO05D010016 8.9e-81 305.1 459 47.5
BcaC07g37267 Brassica carinata HOM05D003348 ORTHO05D010016 1.5e-80 304.3 274 63.5
C04p13150 Brassica napus HOM05D003348 ORTHO05D010016 8.3e-79 298.5 204 75.5
BcaC06g36007 Brassica carinata HOM05D003348 ORTHO05D010016 1.4e-78 297.7 304 61.5
C01p28000 Brassica napus HOM05D003348 ORTHO05D010016 2.4e-78 297.0 436 48.9
BraA06t26263Z Brassica rapa HOM05D003348 ORTHO05D011028 2.4e-78 297.0 459 48.6
C09p50420 Brassica napus HOM05D003348 ORTHO05D010016 5.1e-76 289.3 462 48.1
BolC6t38448H Brassica oleracea HOM05D003348 ORTHO05D010016 5.1e-76 289.3 320 54.4
BolC7t40801H Brassica oleracea HOM05D003348 ORTHO05D010016 5.1e-76 289.3 412 48.5
BcaC01g00111 Brassica carinata HOM05D003348 ORTHO05D010016 1.1e-75 288.1 366 52.5
BcaB05g23930 Brassica carinata HOM05D003348 ORTHO05D010016 3.6e-74 283.1 373 51.5
BraA05t21730Z Brassica rapa HOM05D003348 ORTHO05D010016 4.7e-74 282.7 384 49.0
BcaC03g16941 Brassica carinata HOM05D003348 ORTHO05D010016 9.9e-72 275.0 486 43.0
A02p04450 Brassica napus HOM05D003348 ORTHO05D010016 6.4e-71 272.3 448 43.3
A01p32750 Brassica napus HOM05D003348 ORTHO05D010016 8.3e-71 271.9 185 74.6
BolC8t47537H Brassica oleracea HOM05D003348 ORTHO05D010016 7.1e-70 268.9 392 47.7
A03p65970 Brassica napus HOM05D003348 ORTHO05D010016 2.7e-69 266.9 465 43.9
BolC7t41316H Brassica oleracea HOM05D003348 ORTHO05D010016 1.3e-68 264.6 345 51.0
BcaC03g16878 Brassica carinata HOM05D003348 ORTHO05D010016 2.5e-67 260.4 292 57.5
BraA03t15649Z Brassica rapa HOM05D003348 ORTHO05D010016 2.4e-65 253.8 195 70.3
BcaC05g28875 Brassica carinata HOM05D003348 ORTHO05D010016 1.5e-64 251.1 382 46.9
BcaC06g36451 Brassica carinata HOM05D003348 ORTHO05D010016 9.9e-64 248.4 384 45.1
C07p04070 Brassica napus HOM05D003348 ORTHO05D010016 3.2e-62 243.4 373 46.4
BolC8t46861H Brassica oleracea HOM05D003348 ORTHO05D010016 5.4e-62 242.7 331 50.2
BcaB06g26643 Brassica carinata HOM05D003348 ORTHO05D010016 2.1e-61 240.7 146 84.9
BolC9t57897H Brassica oleracea HOM05D003348 ORTHO05D010016 2.3e-60 237.3 480 41.9
BcaC05g28880 Brassica carinata HOM05D003348 ORTHO05D010016 1.5e-59 234.6 177 70.1
C05p18920 Brassica napus HOM05D003348 ORTHO05D010016 1.8e-57 227.6 371 45.0
BcaC05g27372 Brassica carinata HOM05D003348 ORTHO05D010016 2.9e-55 220.3 181 67.4
BraA02t07591Z Brassica rapa HOM05D003348 ORTHO05D010016 6.4e-55 219.2 207 62.3
BolC4t24341H Brassica oleracea HOM05D003348 ORTHO05D011028 9.3e-54 215.3 348 47.4
BcaC02g10517 Brassica carinata HOM05D003348 ORTHO05D010016 1.7e-47 194.5 309 46.9
BcaC05g25941 Brassica carinata HOM05D003348 ORTHO05D010016 2.9e-47 193.7 163 64.4
BcaC04g20110 Brassica carinata HOM05D006890 ORTHO05D009907 4.9e-47 193.0 146 67.8
C03p71560 Brassica napus HOM05D003348 ORTHO05D010016 8.4e-47 192.2 150 68.0
A03p49040 Brassica napus HOM05D003348 ORTHO05D010016 3.5e-45 186.8 403 40.2
A10p18440 Brassica napus HOM05D003348 ORTHO05D010016 1.8e-41 174.5 293 44.7
C04p27970 Brassica napus HOM05D003348 ORTHO05D011028 6.9e-41 172.6 321 44.5
A09p59860 Brassica napus HOM05D003348 ORTHO05D011028 3.5e-37 160.2 309 41.1
A04p10090 Brassica napus HOM05D003348 ORTHO05D010016 3.0e-36 157.1 292 43.8
BraA04t16864Z Brassica rapa HOM05D003348 ORTHO05D010016 3.3e-35 153.7 296 43.2
A04p08260 Brassica napus HOM05D003348 ORTHO05D010016 5.3e-33 146.4 104 70.2
BcaC08g45319 Brassica carinata HOM05D003348 ORTHO05D010016 7.6e-32 142.5 92 78.3
BraA09t38032Z Brassica rapa HOM05D003348 ORTHO05D010016 7.6e-32 142.5 403 37.7
BcaC06g36529 Brassica carinata HOM05D003348 ORTHO05D010016 1.1e-30 138.7 94 76.6
C02p47780 Brassica napus HOM05D003348 ORTHO05D010016 3.2e-30 137.1 94 74.5
BcaC04g20095 Brassica carinata HOM05D006890 ORTHO05D000421 3.9e-28 130.2 329 38.6
BcaB07g33923 Brassica carinata HOM05D003348 ORTHO05D010016 6.7e-28 129.4 73 89.0
A04p11990 Brassica napus HOM05D003348 ORTHO05D011028 4.3e-27 126.7 273 41.4
C06p34230 Brassica napus HOM05D006890 ORTHO05D040102 1.3e-26 125.2 195 50.3
C09p44080 Brassica napus HOM05D003348 ORTHO05D010016 1.6e-26 124.8 84 75.0
C09p24810 Brassica napus HOM05D003348 ORTHO05D010016 1.1e-25 122.1 152 48.7
BolC4t24342H Brassica oleracea HOM05D003348 ORTHO05D010016 1.1e-25 122.1 78 80.8
BcaB04g17835 Brassica carinata HOM05D003348 ORTHO05D091710 1.2e-24 118.6 70 85.7
BolC2t10813H Brassica oleracea HOM05D003348 ORTHO05D010016 1.2e-24 118.6 84 71.4
A09p62230 Brassica napus HOM05D006890 ORTHO05D000421 4.5e-24 116.7 86 69.8
C03p32970 Brassica napus HOM05D003348 ORTHO05D010016 4.5e-24 116.7 86 69.8
C09p44060 Brassica napus HOM05D003348 ORTHO05D010016 6.5e-23 112.8 284 41.2
BolC9t58934H Brassica oleracea HOM05D003348 ORTHO05D013252 1.0e-20 105.5 162 46.3
C02p48450 Brassica napus HOM05D003348 ORTHO05D010016 1.7e-18 98.2 56 89.3
BolC2t10875H Brassica oleracea HOM05D003348 ORTHO05D010016 1.7e-18 98.2 56 89.3
C04p14390 Brassica napus HOM05D003348 ORTHO05D013252 1.4e-17 95.1 116 57.8
Aa31sc263G10 Aethionema arabicum HOM05D003348 ORTHO05D000395 5.0e-15 86.7 215 26.0
C08p06960 Brassica napus HOM05D003348 ORTHO05D011028 8.5e-15 85.9 47 93.6
BolC9t54115H Brassica oleracea HOM05D003348 ORTHO05D013252 1.9e-14 84.7 115 68.7
C09p12220 Brassica napus HOM05D003348 ORTHO05D013252 2.5e-14 84.3 133 48.9
C09p24820 Brassica napus HOM05D003348 ORTHO05D010016 2.5e-14 84.3 47 87.2
C03p79880 Brassica napus HOM05D003348 ORTHO05D013252 7.2e-14 82.8 117 51.3
C09p44070 Brassica napus HOM05D003348 ORTHO05D010016 9.4e-14 82.4 47 85.1
BolC3t17625H Brassica oleracea HOM05D003348 ORTHO05D013252 2.1e-13 81.3 114 51.8
Aa31LG5G22030 Aethionema arabicum HOM05D003348 ORTHO05D000395 6.1e-13 79.7 216 25.5
BolC2t10874H Brassica oleracea HOM05D003348 ORTHO05D010016 6.1e-13 79.7 93 54.8
Aa31LG9G6060 Aethionema arabicum HOM05D003348 ORTHO05D000395 1.8e-12 78.2 219 24.2
BcaC04g23093 Brassica carinata HOM05D003348 ORTHO05D013252 3.0e-12 77.4 108 68.5
Aa31LG2G17250 Aethionema arabicum HOM05D003348 ORTHO05D010016 8.8e-12 75.9 194 26.8
BraA03t15651Z Brassica rapa HOM05D003348 ORTHO05D011028 2.0e-11 74.7 85 58.8
C07p03250 Brassica napus HOM05D003348 ORTHO05D011028 3.3e-11 73.9 103 52.4
BraA08t33102Z Brassica rapa HOM05D003348 ORTHO05D013252 4.4e-11 73.6 101 55.4
BolC6t38087H Brassica oleracea HOM05D003348 ORTHO05D010016 9.7e-11 72.4 86 54.7
BolC7t40723H Brassica oleracea HOM05D003348 ORTHO05D040102 1.3e-10 72.0 194 37.6
BolC3t19447H Brassica oleracea HOM05D003348 ORTHO05D010016 1.7e-10 71.6 132 44.7
BcaC01g03324 Brassica carinata HOM05D003348 ORTHO05D013252 2.2e-10 71.2 66 68.2
C03p53650 Brassica napus HOM05D003348 ORTHO05D013252 2.2e-10 71.2 66 68.2
C02p48430 Brassica napus HOM05D003348 ORTHO05D011028 2.8e-10 70.9 64 67.2
Carub.0008s2148 Capsella rubella HOM05D000471 ORTHO05D000199 4.8e-10 70.1 237 25.3
BolC6t38449H Brassica oleracea HOM05D003348 ORTHO05D011028 8.2e-10 69.3 86 53.5
Aa31sc411G20 Aethionema arabicum HOM05D003348 ORTHO05D000395 1.1e-09 68.9 114 27.2
C03p65070 Brassica napus HOM05D003348 ORTHO05D011028 1.4e-09 68.6 87 51.7
C07p41030 Brassica napus HOM05D003348 ORTHO05D011028 1.4e-09 68.6 87 51.7
BcaC01g00441 Brassica carinata HOM05D003348 ORTHO05D013252 2.4e-09 67.8 101 51.5
C02p48440 Brassica napus HOM05D003348 ORTHO05D010016 5.3e-09 66.6 106 43.4
BraA09t39939Z Brassica rapa HOM05D003348 ORTHO05D011028 5.3e-09 66.6 93 52.7
Aa31LG9G5280 Aethionema arabicum HOM05D003348 ORTHO05D010016 7.0e-09 66.2 114 31.6
Aa31sc214G40 Aethionema arabicum HOM05D003348 ORTHO05D000395 1.2e-08 65.5 113 26.5
BraA08t33333Z Brassica rapa HOM05D000471 ORTHO05D000199 1.6e-08 65.1 222 26.1
SpUn0002_0500 Schrenkiella parvula HOM05D003348 ORTHO05D010016 1.6e-08 65.1 64 48.4
BolC8t47761H Brassica oleracea HOM05D000471 ORTHO05D000199 2.0e-08 64.7 222 26.1
C01p38100 Brassica napus HOM05D000471 ORTHO05D000199 7.7e-08 62.8 260 21.9
Thhalv10012042m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.7e-07 61.6 218 25.2
BcaB08g36815 Brassica carinata HOM05D003348 ORTHO05D094294 2.2e-07 61.2 94 45.7
Thhalv10022967m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 2.2e-07 61.2 213 24.9
C05p41480 Brassica napus HOM05D000471 ORTHO05D000199 3.8e-07 60.5 222 25.7
BolC5t32887H Brassica oleracea HOM05D000471 ORTHO05D000199 3.8e-07 60.5 222 25.7
Thhalv10001218m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 5.0e-07 60.1 226 23.9
BolC4t25495H Brassica oleracea HOM05D000471 ORTHO05D000199 6.5e-07 59.7 196 26.0
BolC9t55313H Brassica oleracea HOM05D000471 ORTHO05D000199 6.5e-07 59.7 222 25.2
Thhalv10005449m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 6.5e-07 59.7 121 27.3
Thhalv10012192m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.5e-06 58.5 229 24.0
Thhalv10015694m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.5e-06 58.5 204 21.6
Aa31LG10G8940 Aethionema arabicum HOM05D000471 ORTHO05D000199 1.9e-06 58.2 224 25.9
C01p28620 Brassica napus HOM05D000471 ORTHO05D000199 1.9e-06 58.2 264 23.5
Aa31LG11G7530 Aethionema arabicum HOM05D000471 ORTHO05D000199 2.5e-06 57.8 220 25.9
Thhalv10002307m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 2.5e-06 57.8 122 31.1
Thhalv10023860m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 2.5e-06 57.8 202 23.3
BcaB01g01243 Brassica carinata HOM05D003348 ORTHO05D095199 3.2e-06 57.4 34 85.3
BcaB06g26519 Brassica carinata HOM05D000471 ORTHO05D000199 3.2e-06 57.4 215 24.2
C02p41620 Brassica napus HOM05D000471 ORTHO05D000199 3.2e-06 57.4 238 23.9
Thhalv10009813m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 3.2e-06 57.4 120 28.3
Thhalv10023146m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 3.2e-06 57.4 231 24.2
Aa31LG10G13150 Aethionema arabicum HOM05D000471 ORTHO05D000199 4.2e-06 57.0 207 24.2
Aa31LG2G16260 Aethionema arabicum HOM05D001285 ORTHO05D000199 4.2e-06 57.0 207 24.2
Thhalv10029454m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 4.2e-06 57.0 120 31.7
BcaC05g25940 Brassica carinata HOM05D003348 ORTHO05D039563 5.5e-06 56.6 120 45.8
C06p33300 Brassica napus HOM05D006890 ORTHO05D009907 5.5e-06 56.6 33 90.9
C09p39140 Brassica napus HOM05D010384 ORTHO05D013516 5.5e-06 56.6 47 55.3
C09p53280 Brassica napus HOM05D003348 ORTHO05D011028 5.5e-06 56.6 81 51.9
BolC2t10873H Brassica oleracea HOM05D003348 ORTHO05D011028 5.5e-06 56.6 33 90.9
BolC9t56792H Brassica oleracea HOM05D010384 ORTHO05D021981 5.5e-06 56.6 47 55.3
BolC9t56793H Brassica oleracea HOM05D010384 ORTHO05D013516 5.5e-06 56.6 47 55.3
Thhalv10012223m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 5.5e-06 56.6 120 30.8
Sp7g08630 Schrenkiella parvula HOM05D000471 ORTHO05D000199 5.5e-06 56.6 191 21.5
Aa31LG9G6340 Aethionema arabicum HOM05D000471 ORTHO05D000199 7.2e-06 56.2 207 24.2
Sp1g31930 Schrenkiella parvula HOM05D010384 ORTHO05D013516 7.2e-06 56.2 63 39.7
BraA03t15650Z Brassica rapa HOM05D003348 ORTHO05D010016 9.4e-06 55.8 107 39.3


User provided reference genes

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