Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g08641 Brassica carinata HOM05D003338 ORTHO05D096197 3.0e-31 137.9 70 100.0
Sp4g01610 Schrenkiella parvula HOM05D003338 ORTHO05D004042 9.1e-12 73.2 62 61.3
A09p57410 Brassica napus HOM05D003338 ORTHO05D004042 7.7e-11 70.1 62 59.7
BraA09t41133Z Brassica rapa HOM05D003338 ORTHO05D004042 7.7e-11 70.1 62 59.7
Thhalv10000301m.g Eutrema salsugineum HOM05D003338 ORTHO05D004042 1.0e-10 69.7 62 59.7
CARHR113760 Cardamine hirsuta HOM05D003338 ORTHO05D004042 1.3e-10 69.3 56 66.1
BcaB08g35099 Brassica carinata HOM05D003338 ORTHO05D004042 2.2e-10 68.6 62 58.1
BcaB08g35103 Brassica carinata HOM05D003338 ORTHO05D004042 2.2e-10 68.6 62 58.1
BcaC07g41048 Brassica carinata HOM05D003338 ORTHO05D004042 2.9e-10 68.2 62 58.1
C08p40500 Brassica napus HOM05D003338 ORTHO05D004042 2.9e-10 68.2 62 58.1
BolC8t51620H Brassica oleracea HOM05D003338 ORTHO05D004042 2.9e-10 68.2 62 58.1
Carub.0004s0173 Capsella rubella HOM05D003338 ORTHO05D004042 5.0e-10 67.4 63 60.3
AT2G22570 Arabidopsis thaliana HOM05D003338 ORTHO05D004042 5.5e-09 63.9 63 54.0
AL4G12110 Arabidopsis lyrata HOM05D003338 ORTHO05D004042 7.2e-09 63.5 63 55.6
Aa31LG7G14250 Aethionema arabicum HOM05D003338 ORTHO05D004042 1.6e-08 62.4 62 51.6
QL06p035821 Quercus lobata HOM05D003338 ORTHO05D004042 1.6e-08 62.4 60 51.7
Duzib147G0282 Durio zibethinus HOM05D003338 ORTHO05D004042 1.0e-07 59.7 55 49.1
Oeu002143.1 Olea europaea HOM05D003338 ORTHO05D004042 1.0e-07 59.7 60 50.0
EL10Ac6g15202 Beta vulgaris HOM05D003338 ORTHO05D004042 1.8e-07 58.9 42 64.3
Ah.03g139930 Amaranthus hybridus HOM05D003338 ORTHO05D004042 2.3e-07 58.5 42 57.1
Lsat_1_v5_gn_9_115741 Lactuca sativa HOM05D003338 ORTHO05D004042 4.0e-07 57.8 60 40.0
Duzib095G0002 Durio zibethinus HOM05D003338 ORTHO05D004042 5.2e-07 57.4 55 50.9
Duzib264G0712 Durio zibethinus HOM05D003338 ORTHO05D004042 5.2e-07 57.4 55 50.9
Cc07_g14060 Coffea canephora HOM05D003338 ORTHO05D004042 6.7e-07 57.0 59 44.1
DCAR_021909 Daucus carota HOM05D003338 ORTHO05D004042 8.8e-07 56.6 44 54.5
ECA240G2148 Erigeron canadensis HOM05D003338 ORTHO05D004042 8.8e-07 56.6 60 40.0
Aqoxy6G00863 Aquilegia oxysepala HOM05D003338 ORTHO05D004042 1.2e-06 56.2 60 40.0
COL.COLO4_27356 Corchorus olitorius HOM05D003338 ORTHO05D004042 1.2e-06 56.2 62 45.2
Cpa.g.sc55.21 Carica papaya HOM05D003338 ORTHO05D004042 1.5e-06 55.8 42 59.5
vmacro18556 Vaccinium macrocarpon HOM05D003338 ORTHO05D004042 1.5e-06 55.8 45 60.0
Atru.chr3.1241 Acer truncatum HOM05D003338 ORTHO05D004042 2.0e-06 55.5 57 43.9
arahy.Tifrunner.gnm1.ann1.09IS21 Arachis hypogaea HOM05D003338 ORTHO05D004042 2.0e-06 55.5 51 47.1
arahy.Tifrunner.gnm1.ann1.MP5FRC Arachis hypogaea HOM05D003338 ORTHO05D004042 2.0e-06 55.5 51 47.1
CSS0020786 Camellia sinensis var. sinensis HOM05D003338 ORTHO05D004042 2.0e-06 55.5 45 57.8
CSS0038454 Camellia sinensis var. sinensis HOM05D003338 ORTHO05D004042 2.0e-06 55.5 45 57.8
MELO3C018609.2 Cucumis melo HOM05D003338 ORTHO05D004042 2.0e-06 55.5 44 56.8
Gohir.D11G216100 Gossypium hirsutum HOM05D003338 ORTHO05D004042 2.0e-06 55.5 60 46.7
Gorai.007G232300 Gossypium raimondii HOM05D003338 ORTHO05D004042 2.0e-06 55.5 60 46.7
CSS0013733 Camellia sinensis var. sinensis HOM05D003338 ORTHO05D004042 2.6e-06 55.1 63 41.3
TAR376G0459 Trochodendron aralioides HOM05D003338 ORTHO05D004042 2.6e-06 55.1 55 45.5
AUR62003666 Chenopodium quinoa HOM05D003338 ORTHO05D004042 3.3e-06 54.7 42 54.8
Phvul.003G288700 Phaseolus vulgaris HOM05D003338 ORTHO05D004042 3.3e-06 54.7 44 56.8
TAR628G0452 Trochodendron aralioides HOM05D003338 ORTHO05D004042 3.3e-06 54.7 55 45.5
VMungo0251G1603 Vigna mungo HOM05D003338 ORTHO05D004042 3.3e-06 54.7 42 57.1
Ca_18384_v3 Cicer arietinum L. HOM05D003338 ORTHO05D004042 4.4e-06 54.3 60 40.0
Nn5g29874 Nelumbo nucifera HOM05D003338 ORTHO05D004042 4.4e-06 54.3 48 45.8
Rhsim08G0016700 Rhododendron simsii HOM05D003338 ORTHO05D004042 4.4e-06 54.3 55 47.3
Thecc.01G090100 Theobroma cacao HOM05D003338 ORTHO05D004042 4.4e-06 54.3 42 59.5
TWI53G1042 Tripterygium wilfordii HOM05D003338 ORTHO05D004042 4.4e-06 54.3 42 61.9
Haze_10511 Corylus avellana HOM05D003338 ORTHO05D004042 5.7e-06 53.9 51 49.0
Dinv16005 Davidia involucrata HOM05D003338 ORTHO05D004042 5.7e-06 53.9 42 54.8
Migut.K00801 Erythranthe guttata HOM05D003338 ORTHO05D004042 5.7e-06 53.9 60 40.0
MD15G1312000 Malus domestica HOM05D003338 ORTHO05D004042 5.7e-06 53.9 42 59.5
PGR142G2944 Punica granatum HOM05D003338 ORTHO05D004042 5.7e-06 53.9 61 41.0
Sed0007926 Sechium edule HOM05D003338 ORTHO05D004042 5.7e-06 53.9 60 41.7
CSS0035314 Camellia sinensis var. sinensis HOM05D003338 ORTHO05D004042 7.5e-06 53.5 45 57.8
CSS0043251 Camellia sinensis var. sinensis HOM05D003338 ORTHO05D004042 7.5e-06 53.5 45 57.8
ECA238G0630 Erigeron canadensis HOM05D003338 ORTHO05D004042 7.5e-06 53.5 44 54.5
Gohir.A11G207200 Gossypium hirsutum HOM05D003338 ORTHO05D004042 7.5e-06 53.5 60 45.0
Oeu014197.1 Olea europaea HOM05D003338 ORTHO05D004042 7.5e-06 53.5 51 43.1
SGA_v2.0_scaffold115G32124 Striga asiatica HOM05D003338 ORTHO05D004042 7.5e-06 53.5 55 45.5
Actinidia24560 Actinidia chinensis HOM05D003338 ORTHO05D004042 9.7e-06 53.1 45 57.8
Actinidia28822 Actinidia chinensis HOM05D003338 ORTHO05D004042 9.7e-06 53.1 42 61.9
Cfa006878 Carpinus fangiana HOM05D003338 ORTHO05D004042 9.7e-06 53.1 42 59.5
Cc02_g20880 Coffea canephora HOM05D003338 ORTHO05D004042 9.7e-06 53.1 51 39.2
Dinv13598 Davidia involucrata HOM05D003338 ORTHO05D004042 9.7e-06 53.1 42 57.1
Lj4g0005984 Lotus japonicus HOM05D003338 ORTHO05D004042 9.7e-06 53.1 55 47.3
Lalb_Chr05g0217831 Lupinus albus HOM05D003338 ORTHO05D004042 9.7e-06 53.1 42 54.8
Manes.13G100100 Manihot esculenta HOM05D003338 ORTHO05D004042 9.7e-06 53.1 57 42.1
Psat7g101360 Pisum sativum HOM05D003338 ORTHO05D004042 9.7e-06 53.1 42 57.1
TPR.G2863 Trifolium pratense HOM05D003338 ORTHO05D004042 9.7e-06 53.1 60 40.0


User provided reference genes

Program Settings