Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g08561 Brassica carinata HOM05D008316 ORTHO05D014956 8.5e-48 193.7 94 100.0
BolC4t26823H Brassica oleracea HOM05D008316 ORTHO05D014956 8.5e-48 193.7 94 100.0
BcaB05g25144 Brassica carinata HOM05D008316 ORTHO05D005130 4.4e-36 154.8 86 86.0
BcaC09g49342 Brassica carinata HOM05D008316 ORTHO05D005130 4.4e-36 154.8 86 86.0
BcaC02g09635 Brassica carinata HOM05D008316 ORTHO05D005130 5.7e-36 154.5 86 90.7
C02p14930 Brassica napus HOM05D008316 ORTHO05D014956 9.8e-36 153.7 86 89.5
BcaC04g20935 Brassica carinata HOM05D008316 ORTHO05D005130 1.7e-35 152.9 86 87.2
BraA08t32672Z Brassica rapa HOM05D008316 ORTHO05D014956 1.7e-35 152.9 79 93.7
BcaC08g44739 Brassica carinata HOM05D008316 ORTHO05D005130 2.1e-30 136.0 74 90.5
BcaB07g32291 Brassica carinata HOM05D008316 ORTHO05D014956 1.4e-29 133.3 74 85.1
BcaB04g17553 Brassica carinata HOM05D008316 ORTHO05D014956 2.0e-25 119.4 86 69.8
BcaB02g06748 Brassica carinata HOM05D008316 ORTHO05D005130 6.6e-24 114.4 99 64.6
BcaC08g42812 Brassica carinata HOM05D008825 ORTHO05D013031 9.5e-23 110.5 82 67.1
BcaB07g32749 Brassica carinata HOM05D008316 ORTHO05D013031 1.6e-22 109.8 82 67.1
BcaC05g27750 Brassica carinata HOM05D008825 ORTHO05D013031 4.7e-22 108.2 99 60.6
C05p37400 Brassica napus HOM05D003554 ORTHO05D005130 2.3e-21 105.9 75 69.3
BolC8t48343H Brassica oleracea HOM05D008316 ORTHO05D014956 3.0e-21 105.5 57 91.2
C01p42550 Brassica napus HOM05D008316 ORTHO05D014956 4.4e-20 101.7 57 87.7
BcaC06g34855 Brassica carinata HOM05D008316 ORTHO05D005130 1.0e-16 90.5 86 62.8
BcaB02g11054 Brassica carinata HOM05D009532 ORTHO05D005130 2.5e-15 85.9 82 48.8
BcaC04g20884 Brassica carinata HOM05D009532 ORTHO05D013511 1.4e-13 80.1 82 47.6
BcaC07g39489 Brassica carinata HOM05D009532 ORTHO05D013511 1.4e-13 80.1 82 47.6
BcaC08g43125 Brassica carinata HOM05D009532 ORTHO05D013511 4.0e-13 78.6 82 46.3
BcaB06g26180 Brassica carinata HOM05D009532 ORTHO05D005130 9.8e-12 73.9 82 48.8
BcaB05g23532 Brassica carinata HOM05D008316 ORTHO05D005130 1.1e-10 70.5 77 46.8
BolC7t42790H Brassica oleracea HOM05D008316 ORTHO05D014956 1.9e-10 69.7 37 89.2
C02p57980 Brassica napus HOM05D017905 ORTHO05D017243 2.4e-10 69.3 77 41.6
C06p05550 Brassica napus HOM05D009532 ORTHO05D013511 2.4e-10 69.3 73 46.6
BcaB05g24479 Brassica carinata HOM05D008316 ORTHO05D017243 3.2e-10 68.9 92 45.7
BcaB06g28000 Brassica carinata HOM05D009532 ORTHO05D005130 4.1e-10 68.6 72 44.4
BraA01t01424Z Brassica rapa HOM05D008316 ORTHO05D014956 4.1e-10 68.6 37 89.2
C09p38200 Brassica napus HOM05D009532 ORTHO05D013511 5.4e-10 68.2 73 45.2
BolC5t32294H Brassica oleracea HOM05D009532 ORTHO05D013511 5.4e-10 68.2 73 45.2
BraA09t38753Z Brassica rapa HOM05D008825 ORTHO05D013031 7.0e-10 67.8 54 61.1
A08p07770 Brassica napus HOM05D009532 ORTHO05D013511 1.2e-09 67.0 73 45.2
BraA06t24764Z Brassica rapa HOM05D009532 ORTHO05D013511 1.2e-09 67.0 73 45.2
C06p04000 Brassica napus HOM05D009532 ORTHO05D013511 1.6e-09 66.6 73 43.8
BolC8t48188H Brassica oleracea HOM05D009532 ORTHO05D013511 1.6e-09 66.6 73 43.8
BolC9t56606H Brassica oleracea HOM05D008316 ORTHO05D014956 1.6e-09 66.6 36 86.1
BcaC01g04710 Brassica carinata HOM05D008825 ORTHO05D013031 2.0e-09 66.2 64 51.6
C08p25340 Brassica napus HOM05D009532 ORTHO05D013511 2.0e-09 66.2 73 43.8
BolC8t50155H Brassica oleracea HOM05D009532 ORTHO05D013511 2.0e-09 66.2 73 43.8
BcaB06g28040 Brassica carinata HOM05D008316 ORTHO05D005130 2.7e-09 65.9 77 44.2
BolC9t56660H Brassica oleracea HOM05D009532 ORTHO05D013511 6.0e-09 64.7 73 42.5
Aa31LG10G9030 Aethionema arabicum HOM05D003554 ORTHO05D008395 4.3e-07 58.5 81 35.8
BcaC07g37797 Brassica carinata HOM05D009532 ORTHO05D013511 4.3e-07 58.5 63 42.9
Carub.0003s2756 Capsella rubella HOM05D003554 ORTHO05D005130 3.6e-06 55.5 79 39.2
BcaC01g05681 Brassica carinata HOM05D009532 ORTHO05D013511 4.7e-06 55.1 74 39.2
BcaB06g26193 Brassica carinata HOM05D003554 ORTHO05D014926 8.1e-06 54.3 82 43.9


User provided reference genes

Program Settings