Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g08458 Brassica carinata HOM05D000010 ORTHO05D000302 9.8e-73 276.9 165 100.0
BcaC02g08461 Brassica carinata HOM05D000010 ORTHO05D000302 9.8e-65 250.4 155 99.4
BcaB06g27968 Brassica carinata HOM05D000010 ORTHO05D000302 9.5e-60 233.8 155 85.2
BcaC02g08456 Brassica carinata HOM05D000010 ORTHO05D000302 9.5e-60 233.8 155 85.2
BolC4t26955H Brassica oleracea HOM05D000010 ORTHO05D000302 9.5e-60 233.8 155 85.2
AT2G24430 Arabidopsis thaliana HOM05D000010 ORTHO05D000302 3.6e-59 231.9 154 90.9
A04p18740 Brassica napus HOM05D000010 ORTHO05D000302 4.7e-59 231.5 155 92.3
C04p54030 Brassica napus HOM05D000010 ORTHO05D000302 8.0e-59 230.7 155 92.3
Sp4g03450 Schrenkiella parvula HOM05D000010 ORTHO05D000302 8.0e-59 230.7 155 92.9
BraA04t17484Z Brassica rapa HOM05D000010 ORTHO05D000302 1.0e-58 230.3 155 91.6
A09p56310 Brassica napus HOM05D000010 ORTHO05D000302 5.8e-57 224.6 155 89.0
BraA09t41026Z Brassica rapa HOM05D000010 ORTHO05D000302 5.8e-57 224.6 155 89.0
Carub.0004s0378 Capsella rubella HOM05D000010 ORTHO05D000302 9.8e-57 223.8 156 84.0
Thhalv10000520m.g Eutrema salsugineum HOM05D000010 ORTHO05D000302 6.4e-56 221.1 156 91.7
AL4G14860 Arabidopsis lyrata HOM05D000010 ORTHO05D000302 1.9e-55 219.5 157 86.6
BcaC07g40933 Brassica carinata HOM05D000010 ORTHO05D000302 2.7e-54 215.7 155 85.8
C08p39270 Brassica napus HOM05D000010 ORTHO05D000302 2.7e-54 215.7 155 85.8
BolC8t51500H Brassica oleracea HOM05D000010 ORTHO05D000302 2.7e-54 215.7 155 85.8
CARHR117630 Cardamine hirsuta HOM05D000010 ORTHO05D000302 1.7e-53 213.0 154 89.6
Aa31LG7G11380 Aethionema arabicum HOM05D000010 ORTHO05D000302 9.6e-36 154.1 170 71.2
THA.LOC104803880 Tarenaya hassleriana HOM05D000010 ORTHO05D000302 3.3e-20 102.4 162 45.1
THA.LOC104803591 Tarenaya hassleriana HOM05D000010 ORTHO05D000302 3.2e-15 85.9 181 40.3
Thecc.09G004500 Theobroma cacao HOM05D000010 ORTHO05D000302 1.2e-09 67.4 180 32.2
Duzib168G0631 Durio zibethinus HOM05D000010 ORTHO05D000302 4.5e-09 65.5 186 32.8
Sabra18G0009400 Salix brachista HOM05D000010 ORTHO05D000302 2.9e-08 62.8 193 32.1
Potri.018G003800 Populus trichocarpa HOM05D000010 ORTHO05D000302 4.9e-08 62.0 186 32.8
Manes.03G002200 Manihot esculenta HOM05D000010 ORTHO05D000302 1.1e-07 60.8 159 31.4
Ah.11g043980 Amaranthus hybridus HOM05D000010 ORTHO05D000302 3.2e-07 59.3 162 32.1
Cpa.g.sc244.7 Carica papaya HOM05D000010 ORTHO05D000302 3.2e-07 59.3 193 30.6
Ciclev10008885m.g Citrus clementina HOM05D000010 ORTHO05D000302 3.2e-07 59.3 130 33.8
Cfa013323 Carpinus fangiana HOM05D000010 ORTHO05D000302 4.2e-07 58.9 132 37.1
Eucgr.C02105 Eucalyptus grandis HOM05D000010 ORTHO05D000302 4.2e-07 58.9 190 29.5
Sabra06G0214700 Salix brachista HOM05D000010 ORTHO05D000302 1.6e-06 57.0 195 29.7
CANSAT56G1408 Cannabis sativa HOM05D000010 ORTHO05D000302 2.1e-06 56.6 132 35.6
GSVIVG01035554001 Vitis vinifera HOM05D000010 ORTHO05D000302 2.1e-06 56.6 129 34.9
CANSAT56G4484 Cannabis sativa HOM05D000010 ORTHO05D000302 2.7e-06 56.2 133 35.3
Potri.006G277000 Populus trichocarpa HOM05D000010 ORTHO05D000302 3.5e-06 55.8 191 28.8


User provided reference genes

Program Settings