Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g08397 Brassica carinata HOM05D000108 ORTHO05D014103 1.3e-82 309.7 156 100.0
BolC7t43905H Brassica oleracea HOM05D000108 ORTHO05D014103 1.1e-54 216.9 173 69.9
BcaC02g07526 Brassica carinata HOM05D000108 ORTHO05D001149 1.2e-43 180.3 149 68.5
BcaC06g33995 Brassica carinata HOM05D000108 ORTHO05D014103 1.2e-43 180.3 152 67.8
C07p33910 Brassica napus HOM05D000108 ORTHO05D014103 1.2e-43 180.3 152 67.8
C02p25070 Brassica napus HOM05D000108 ORTHO05D014103 1.0e-42 177.2 152 67.1
BraA04t18334Z Brassica rapa HOM05D000108 ORTHO05D001149 6.5e-42 174.5 149 66.4
C04p65890 Brassica napus HOM05D000108 ORTHO05D001149 4.2e-41 171.8 149 65.1
BcaB06g28989 Brassica carinata HOM05D000108 ORTHO05D001149 5.5e-41 171.4 149 65.8
Sp4g19760 Schrenkiella parvula HOM05D000108 ORTHO05D001149 1.6e-40 169.9 149 65.1
A04p28560 Brassica napus HOM05D000108 ORTHO05D001149 3.5e-40 168.7 150 65.3
BolC4t28093H Brassica oleracea HOM05D000108 ORTHO05D001149 1.0e-39 167.2 149 63.8
C09p31480 Brassica napus HOM05D000108 ORTHO05D014103 3.7e-37 158.7 152 63.2
BolC9t56007H Brassica oleracea HOM05D000108 ORTHO05D014103 3.7e-37 158.7 152 63.2
C09p40020 Brassica napus HOM05D000108 ORTHO05D014103 1.5e-35 153.3 152 61.8
BolC9t56899H Brassica oleracea HOM05D000108 ORTHO05D014103 1.5e-35 153.3 152 61.8
Carub.0004s1934 Capsella rubella HOM05D000108 ORTHO05D001149 1.5e-35 153.3 149 58.4
BcaC04g21465 Brassica carinata HOM05D000108 ORTHO05D014103 1.7e-34 149.8 148 62.2
Thhalv10016170m.g Eutrema salsugineum HOM05D000108 ORTHO05D001149 1.7e-34 149.8 149 59.1
AL4G33810 Arabidopsis lyrata HOM05D000108 ORTHO05D001149 1.1e-33 147.1 150 58.0
AT2G37420 Arabidopsis thaliana HOM05D000108 ORTHO05D001149 1.9e-33 146.4 149 57.0
BcaC04g20709 Brassica carinata HOM05D000108 ORTHO05D014103 7.2e-33 144.4 148 60.8
CARHR132170 Cardamine hirsuta HOM05D000108 ORTHO05D001149 3.9e-31 138.7 151 54.3
BcaC02g07525 Brassica carinata HOM05D000108 ORTHO05D014103 1.0e-23 114.0 78 78.2
BcaB04g19587 Brassica carinata HOM05D000108 ORTHO05D014103 8.8e-23 110.9 114 58.8
Aa31LG5G22850 Aethionema arabicum HOM05D000108 ORTHO05D001149 3.3e-22 109.0 149 46.3
THA.LOC104806586 Tarenaya hassleriana HOM05D000108 ORTHO05D001149 5.5e-17 91.7 149 40.9
BcaB06g26258 Brassica carinata HOM05D000108 ORTHO05D014103 2.0e-11 73.2 61 68.9
Thecc.05G045800 Theobroma cacao HOM05D000108 ORTHO05D001149 3.6e-08 62.4 155 31.0
MELO3C003101.2 Cucumis melo HOM05D000108 ORTHO05D001149 1.2e-06 57.4 126 36.5
Dinv35646 Davidia involucrata HOM05D000108 ORTHO05D001149 1.2e-06 57.4 154 31.2
Gohir.A04G079500 Gossypium hirsutum HOM05D000108 ORTHO05D001149 1.5e-06 57.0 162 30.2
Ciclev10010956m.g Citrus clementina HOM05D000108 ORTHO05D001149 2.6e-06 56.2 155 31.6
Migut.J00371 Erythranthe guttata HOM05D000108 ORTHO05D001149 3.3e-06 55.8 150 28.7
Gorai.009G423900 Gossypium raimondii HOM05D000108 ORTHO05D001149 3.3e-06 55.8 162 29.6
Duzib106G1757 Durio zibethinus HOM05D000108 ORTHO05D001149 7.5e-06 54.7 162 27.8
CsaV3_4G024680 Cucumis sativus L. HOM05D000108 ORTHO05D001149 9.7e-06 54.3 152 32.9


User provided reference genes

Program Settings