Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g08297 Brassica carinata HOM05D002776 ORTHO05D003044 3.1e-104 381.7 179 100.0
C01p48980 Brassica napus HOM05D002776 ORTHO05D003542 8.7e-51 204.1 320 42.2
C05p44740 Brassica napus HOM05D002776 ORTHO05D003044 1.5e-50 203.4 317 42.3
C09p27490 Brassica napus HOM05D002776 ORTHO05D003044 1.6e-49 199.9 338 40.5
BcaC01g02374 Brassica carinata HOM05D002776 ORTHO05D003044 1.2e-47 193.7 375 36.5
C09p19460 Brassica napus HOM05D002776 ORTHO05D003044 5.5e-45 184.9 367 36.0
C02p53520 Brassica napus HOM05D002776 ORTHO05D003044 1.2e-44 183.7 370 35.7
C01p30580 Brassica napus HOM05D002776 ORTHO05D003044 1.6e-44 183.3 370 35.7
C03p65980 Brassica napus HOM05D002776 ORTHO05D003044 2.1e-44 183.0 371 35.6
C07p49090 Brassica napus HOM05D002776 ORTHO05D003044 5.1e-43 178.3 371 35.3
A05p28380 Brassica napus HOM05D002776 ORTHO05D003044 8.8e-43 177.6 363 35.5
A01p28530 Brassica napus HOM05D002776 ORTHO05D003044 1.3e-41 173.7 367 35.1
A03p54420 Brassica napus HOM05D002776 ORTHO05D003044 2.2e-41 172.9 363 35.3
C03p66380 Brassica napus HOM05D002776 ORTHO05D003044 3.4e-39 165.6 370 34.1
A03p65940 Brassica napus HOM05D002776 ORTHO05D003044 1.3e-38 163.7 410 32.4
A08p09940 Brassica napus HOM05D002776 ORTHO05D003044 6.5e-38 161.4 406 32.0
A10p06820 Brassica napus HOM05D002776 ORTHO05D003044 2.5e-37 159.5 405 31.1
A01p26310 Brassica napus HOM05D002776 ORTHO05D011320 5.5e-37 158.3 309 36.6
A07p02050 Brassica napus HOM05D002776 ORTHO05D003044 9.4e-37 157.5 338 36.4
C03p80440 Brassica napus HOM05D002776 ORTHO05D011320 4.7e-36 155.2 143 58.7
C01p44940 Brassica napus HOM05D002776 ORTHO05D003044 6.1e-36 154.8 280 40.0
BolC3t18911H Brassica oleracea HOM05D002776 ORTHO05D003044 2.8e-33 146.0 123 62.6
C03p75860 Brassica napus HOM05D002776 ORTHO05D003044 3.7e-33 145.6 118 64.4
BolC2t11289H Brassica oleracea HOM05D002776 ORTHO05D003044 4.8e-33 145.2 357 33.9
BolC8t49070H Brassica oleracea HOM05D002776 ORTHO05D011320 1.4e-32 143.7 123 61.8
A08p08130 Brassica napus HOM05D002776 ORTHO05D003044 4.1e-32 142.1 118 64.4
C09p16540 Brassica napus HOM05D002776 ORTHO05D011320 4.1e-32 142.1 118 63.6
BraA03t15647Z Brassica rapa HOM05D002776 ORTHO05D003044 5.3e-32 141.7 118 63.6
C07p38490 Brassica napus HOM05D002776 ORTHO05D011320 1.2e-31 140.6 120 61.7
A01p20500 Brassica napus HOM05D002776 ORTHO05D003044 1.5e-31 140.2 118 62.7
BraA07t28346Z Brassica rapa HOM05D002776 ORTHO05D000395 2.0e-31 139.8 123 60.2
BcaC08g44371 Brassica carinata HOM05D002776 ORTHO05D003044 4.5e-31 138.7 410 30.0
C05p34920 Brassica napus HOM05D002776 ORTHO05D011320 5.9e-31 138.3 125 59.2
A08p07560 Brassica napus HOM05D002776 ORTHO05D003044 7.7e-31 137.9 134 58.2
BcaC09g48965 Brassica carinata HOM05D002776 ORTHO05D003044 1.3e-30 137.1 405 29.9
BolC5t32217H Brassica oleracea HOM05D002776 ORTHO05D011320 2.9e-30 136.0 126 58.7
A10p06580 Brassica napus HOM05D002776 ORTHO05D000395 6.5e-30 134.8 374 31.8
BcaC06g36448 Brassica carinata HOM05D002776 ORTHO05D003044 2.7e-28 129.4 408 29.2
C04p56090 Brassica napus HOM05D002776 ORTHO05D003044 1.5e-26 123.6 58 98.3
BcaC02g09778 Brassica carinata HOM05D002776 ORTHO05D011320 7.4e-26 121.3 117 56.4
C09p21150 Brassica napus HOM05D002776 ORTHO05D003044 2.8e-25 119.4 81 72.8
C01p38700 Brassica napus HOM05D002776 ORTHO05D003044 3.7e-25 119.0 58 93.1
BolC6t36241H Brassica oleracea HOM05D002776 ORTHO05D003044 3.7e-25 119.0 58 93.1
BcaB06g27856 Brassica carinata HOM05D002776 ORTHO05D003044 8.2e-25 117.9 366 29.2
C02p52030 Brassica napus HOM05D002776 ORTHO05D003044 1.1e-24 117.5 58 91.4
BolC6t36736H Brassica oleracea HOM05D002776 ORTHO05D011320 1.1e-24 117.5 119 54.6
BolC9t55017H Brassica oleracea HOM05D002776 ORTHO05D003044 1.1e-24 117.5 58 91.4
A09p33400 Brassica napus HOM05D002776 ORTHO05D003044 1.4e-24 117.1 389 28.3
BraA08t32988Z Brassica rapa HOM05D002776 ORTHO05D003044 2.4e-24 116.3 58 91.4
C07p01230 Brassica napus HOM05D002776 ORTHO05D003044 3.1e-24 115.9 58 91.4
BcaB07g33314 Brassica carinata HOM05D002776 ORTHO05D003044 4.1e-24 115.5 247 33.2
C04p41840 Brassica napus HOM05D002776 ORTHO05D003044 4.1e-24 115.5 70 78.6
C03p44580 Brassica napus HOM05D002776 ORTHO05D003044 5.3e-24 115.2 58 89.7
BraA01t03051Z Brassica rapa HOM05D002776 ORTHO05D003044 1.2e-23 114.0 117 54.7
BolC4t25127H Brassica oleracea HOM05D002776 ORTHO05D003044 2.0e-23 113.2 55 92.7
BraA09t38883Z Brassica rapa HOM05D002776 ORTHO05D003044 2.6e-23 112.8 58 89.7
A08p08120 Brassica napus HOM05D002776 ORTHO05D003044 5.9e-23 111.7 54 94.4
C05p34930 Brassica napus HOM05D002776 ORTHO05D003044 5.9e-23 111.7 54 94.4
BcaB03g16806 Brassica carinata HOM05D002776 ORTHO05D003044 7.7e-23 111.3 389 26.2
BraA01t03050Z Brassica rapa HOM05D002776 ORTHO05D003044 1.3e-22 110.5 54 92.6
BcaC04g22429 Brassica carinata HOM05D002776 ORTHO05D011320 1.7e-22 110.2 122 53.3
C03p56220 Brassica napus HOM05D001224 ORTHO05D003542 1.7e-22 110.2 54 92.6
BraA08t32833Z Brassica rapa HOM05D002776 ORTHO05D003044 1.7e-22 110.2 54 92.6
BcaB01g01307 Brassica carinata HOM05D002776 ORTHO05D003044 2.9e-22 109.4 406 27.3
BcaB04g18312 Brassica carinata HOM05D002776 ORTHO05D003044 2.9e-22 109.4 58 87.9
BraA03t14507Z Brassica rapa HOM05D002776 ORTHO05D003044 3.8e-22 109.0 54 92.6
BraA07t28347Z Brassica rapa HOM05D002776 ORTHO05D003044 3.8e-22 109.0 54 92.6
BraA09t40149Z Brassica rapa HOM05D002776 ORTHO05D003044 3.8e-22 109.0 54 92.6
BcaB04g17677 Brassica carinata HOM05D002776 ORTHO05D003044 6.5e-22 108.2 58 86.2
A01p20510 Brassica napus HOM05D002776 ORTHO05D003044 3.2e-21 105.9 54 90.7
BraA01t01979Z Brassica rapa HOM05D002776 ORTHO05D003044 3.2e-21 105.9 54 90.7
BolC3t16974H Brassica oleracea HOM05D002776 ORTHO05D003044 7.2e-21 104.8 54 88.9
BcaB01g01630 Brassica carinata HOM05D002776 ORTHO05D011320 5.7e-18 95.1 117 47.0
BraA03t15291Z Brassica rapa HOM05D002776 ORTHO05D000395 5.7e-18 95.1 81 63.0
BolC3t17909H Brassica oleracea HOM05D002776 ORTHO05D003044 7.5e-18 94.7 80 62.5
BolC8t47366H Brassica oleracea HOM05D002776 ORTHO05D003044 7.5e-18 94.7 43 95.3
BcaB01g01817 Brassica carinata HOM05D002776 ORTHO05D003044 8.3e-17 91.3 116 44.0
C04p36700 Brassica napus HOM05D002776 ORTHO05D011320 2.4e-16 89.7 124 45.2
BcaC05g27518 Brassica carinata HOM05D002776 ORTHO05D000395 3.1e-16 89.4 98 54.1
BcaB05g23078 Brassica carinata HOM05D002776 ORTHO05D011320 4.1e-16 89.0 116 44.0
BcaB06g27028 Brassica carinata HOM05D002776 ORTHO05D003044 4.1e-16 89.0 116 45.7
BcaB01g03188 Brassica carinata HOM05D002776 ORTHO05D003044 5.4e-16 88.6 117 45.3
BraA01t01978Z Brassica rapa HOM05D002776 ORTHO05D003044 9.1e-16 87.8 81 59.3
BcaB05g23247 Brassica carinata HOM05D002776 ORTHO05D011320 1.2e-15 87.4 114 44.7
BcaC03g14316 Brassica carinata HOM05D002776 ORTHO05D011320 2.0e-15 86.7 131 44.3
BcaC08g43735 Brassica carinata HOM05D002776 ORTHO05D003044 2.7e-15 86.3 116 42.2
BraA09t40150Z Brassica rapa HOM05D002776 ORTHO05D011320 2.7e-15 86.3 81 58.0
BcaC09g50108 Brassica carinata HOM05D002776 ORTHO05D011320 4.5e-15 85.5 47 85.1
C06p18050 Brassica napus HOM05D002776 ORTHO05D000395 4.5e-15 85.5 48 83.3
BcaC05g25874 Brassica carinata HOM05D002776 ORTHO05D003044 5.9e-15 85.1 116 43.1
BcaC06g36687 Brassica carinata HOM05D002776 ORTHO05D011320 1.3e-14 84.0 48 81.2
A08p06070 Brassica napus HOM05D002776 ORTHO05D011320 1.7e-14 83.6 44 88.6
BcaC06g33589 Brassica carinata HOM05D002776 ORTHO05D003542 3.8e-14 82.4 196 32.1
BcaC09g51818 Brassica carinata HOM05D002776 ORTHO05D003044 5.0e-14 82.0 69 59.4
C03p44570 Brassica napus HOM05D002776 ORTHO05D011320 1.1e-13 80.9 44 84.1
C07p30710 Brassica napus HOM05D002776 ORTHO05D042973 1.1e-13 80.9 48 79.2
BcaC08g44059 Brassica carinata HOM05D002776 ORTHO05D011320 2.5e-13 79.7 48 77.1
BraA03t14508Z Brassica rapa HOM05D002776 ORTHO05D107841 3.2e-13 79.3 44 84.1
C08p06670 Brassica napus HOM05D002776 ORTHO05D003044 4.7e-12 75.5 33 93.9
BcaB07g33086 Brassica carinata HOM05D002776 ORTHO05D003044 6.8e-11 71.6 36 83.3
BcaB03g16195 Brassica carinata HOM05D002776 ORTHO05D003044 1.5e-10 70.5 36 83.3
BolC3t18858H Brassica oleracea HOM05D002776 ORTHO05D000395 1.5e-10 70.5 37 86.5
BcaB06g26760 Brassica carinata HOM05D002776 ORTHO05D008559 3.4e-10 69.3 36 80.6
BcaB08g35015 Brassica carinata HOM05D002776 ORTHO05D011320 9.8e-10 67.8 36 80.6
BcaB05g22944 Brassica carinata HOM05D002776 ORTHO05D000395 1.7e-09 67.0 36 77.8
BcaB01g01631 Brassica carinata HOM05D002776 ORTHO05D003044 2.8e-09 66.2 37 83.8
BcaC01g02507 Brassica carinata HOM05D002776 ORTHO05D003044 3.5e-07 59.3 29 82.8
BolC3t19181H Brassica oleracea HOM05D008414 ORTHO05D008559 4.5e-07 58.9 54 51.9
Carub.0001s3343 Capsella rubella HOM05D000675 ORTHO05D000395 5.9e-07 58.5 58 50.0
BolC9t57418H Brassica oleracea HOM05D001224 ORTHO05D003044 7.7e-07 58.2 65 43.1
BcaB02g11226 Brassica carinata HOM05D002776 ORTHO05D003044 1.0e-06 57.8 36 63.9
BcaC08g44058 Brassica carinata HOM05D002776 ORTHO05D090300 1.0e-06 57.8 87 39.1
Carub.0029s0003 Capsella rubella HOM05D000675 ORTHO05D000395 2.3e-06 56.6 58 46.6
Carub.0029s0001 Capsella rubella HOM05D000675 ORTHO05D000395 5.0e-06 55.5 58 46.6
BcaB06g26729 Brassica carinata HOM05D002776 ORTHO05D000395 6.6e-06 55.1 118 36.4
BcaB07g33215 Brassica carinata HOM05D002776 ORTHO05D003044 6.6e-06 55.1 58 48.3
C01p38740 Brassica napus HOM05D002776 ORTHO05D003044 6.6e-06 55.1 58 43.1
C04p09720 Brassica napus HOM05D001224 ORTHO05D016111 6.6e-06 55.1 65 43.1
C07p13920 Brassica napus HOM05D002776 ORTHO05D003044 6.6e-06 55.1 58 43.1
BcaC06g35068 Brassica carinata HOM05D002776 ORTHO05D012331 8.6e-06 54.7 55 43.6
C03p56210 Brassica napus HOM05D002776 ORTHO05D003044 8.6e-06 54.7 79 45.6


User provided reference genes

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