Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g08229 Brassica carinata HOM05D008128 ORTHO05D010259 3.2e-39 164.9 98 100.0
C04p56930 Brassica napus HOM05D008128 ORTHO05D010259 1.4e-37 159.5 98 87.8
A04p21130 Brassica napus HOM05D008128 ORTHO05D010259 3.0e-37 158.3 98 98.0
BcaB06g28169 Brassica carinata HOM05D008128 ORTHO05D010259 1.7e-32 142.5 98 81.6
BolC4t27230H Brassica oleracea HOM05D008128 ORTHO05D010259 1.1e-31 139.8 88 86.4
BraA04t17682Z Brassica rapa HOM05D008128 ORTHO05D010259 2.5e-31 138.7 88 97.7
BolC4t23880H Brassica oleracea HOM05D008128 ORTHO05D010259 6.7e-29 130.6 104 75.0
BraA07t29553Z Brassica rapa HOM05D008128 ORTHO05D010259 1.5e-28 129.4 103 74.8
A07p18370 Brassica napus HOM05D008128 ORTHO05D010259 2.0e-28 129.0 103 74.8
C04p23830 Brassica napus HOM05D008128 ORTHO05D010259 4.4e-28 127.9 104 74.0
Sp4g10610 Schrenkiella parvula HOM05D008128 ORTHO05D010259 1.7e-27 125.9 107 71.0
BcaB02g10115 Brassica carinata HOM05D008128 ORTHO05D010259 4.8e-27 124.4 105 71.4
BcaC02g10905 Brassica carinata HOM05D008128 ORTHO05D010259 1.1e-26 123.2 104 73.1
Thhalv10017465m.g Eutrema salsugineum HOM05D008128 ORTHO05D010259 2.2e-24 115.5 107 70.1
Carub.0004s0853 Capsella rubella HOM05D008128 ORTHO05D010259 3.3e-20 101.7 100 65.0
Aa31LG5G8220 Aethionema arabicum HOM05D008128 ORTHO05D010259 2.8e-19 98.6 107 60.7
AL4G22520 Arabidopsis lyrata HOM05D008128 ORTHO05D010259 4.8e-19 97.8 103 62.1
CARHR120480 Cardamine hirsuta HOM05D008128 ORTHO05D010259 1.4e-18 96.3 102 60.8
AT2G27775 Arabidopsis thaliana HOM05D008128 ORTHO05D010259 3.1e-18 95.1 103 61.2
THA.LOC104826404 Tarenaya hassleriana HOM05D008128 ORTHO05D010259 2.6e-17 92.0 103 57.3
CANSAT54G0355 Cannabis sativa HOM05D008128 ORTHO05D010259 4.4e-12 74.7 94 51.1
Manes.04G008100 Manihot esculenta HOM05D008128 ORTHO05D010259 9.8e-12 73.6 106 49.1
Gohir.D05G086500 Gossypium hirsutum HOM05D008128 ORTHO05D010259 8.3e-11 70.5 102 51.0
Gorai.009G088100 Gossypium raimondii HOM05D008128 ORTHO05D010259 8.3e-11 70.5 102 51.0
Thecc.09G290900 Theobroma cacao HOM05D008128 ORTHO05D010259 1.1e-10 70.1 59 67.8
TWI31G0843 Tripterygium wilfordii HOM05D008128 ORTHO05D010259 1.8e-10 69.3 108 48.1
Prupe.6G119900 Prunus persica HOM05D008128 ORTHO05D010259 2.4e-10 68.9 101 46.5
Duzib168G2012 Durio zibethinus HOM05D008128 ORTHO05D010259 4.1e-10 68.2 100 50.0
Duzib170G0339 Durio zibethinus HOM05D008128 ORTHO05D010259 4.1e-10 68.2 58 67.2
Manes.11G157800 Manihot esculenta HOM05D008128 ORTHO05D010259 4.1e-10 68.2 105 44.8
Gohir.A05G083600 Gossypium hirsutum HOM05D008128 ORTHO05D010259 1.2e-09 66.6 101 49.5
FAN25G2677 Fragaria x ananassa HOM05D008128 ORTHO05D010259 2.0e-09 65.9 58 62.1
MD11G1158100 Malus domestica HOM05D008128 ORTHO05D010259 2.0e-09 65.9 96 44.8
CiPaw.05G064900 Carya illinoinensis HOM05D008128 ORTHO05D010259 2.7e-09 65.5 109 45.9
FAN25G1097 Fragaria x ananassa HOM05D008128 ORTHO05D010259 2.7e-09 65.5 58 62.1
FvH4_3g24190 Fragaria vesca HOM05D008128 ORTHO05D010259 4.5e-09 64.7 101 46.5
Aa31LG5G8210 Aethionema arabicum HOM05D005584 ORTHO05D006809 7.7e-09 63.9 98 48.0
RcHm_v2.0_Chr5g0043301 Rosa chinensis HOM05D008128 ORTHO05D010259 7.7e-09 63.9 101 45.5
CiPaw.14G103200 Carya illinoinensis HOM05D008128 ORTHO05D010259 1.0e-08 63.5 84 50.0
Potri.009G148400 Populus trichocarpa HOM05D008128 ORTHO05D010259 1.7e-08 62.8 103 44.7
MD03G1135500 Malus domestica HOM05D008128 ORTHO05D010259 5.0e-08 61.2 96 41.7
Cfa010077 Carpinus fangiana HOM05D008128 ORTHO05D010259 1.5e-07 59.7 45 64.4
Dinv29430 Davidia involucrata HOM05D008128 ORTHO05D010259 1.5e-07 59.7 97 46.4
Gohir.A07G107600 Gossypium hirsutum HOM05D008128 ORTHO05D010259 1.5e-07 59.7 100 44.0
CiPaw.13G140600 Carya illinoinensis HOM05D008128 ORTHO05D010259 1.9e-07 59.3 98 42.9
PSO170G0300 Papaver somniferum HOM05D008128 ORTHO05D010259 1.9e-07 59.3 61 62.3
PSO384G2376 Papaver somniferum HOM05D008128 ORTHO05D010259 5.5e-07 57.8 60 61.7
PSO443G0067 Papaver somniferum HOM05D008128 ORTHO05D010259 5.5e-07 57.8 60 61.7
Nn6g35034 Nelumbo nucifera HOM05D008128 ORTHO05D010259 9.4e-07 57.0 61 59.0
Dinv21251 Davidia involucrata HOM05D008128 ORTHO05D010259 1.6e-06 56.2 47 66.0
Actinidia08433 Actinidia chinensis HOM05D008128 ORTHO05D010259 2.1e-06 55.8 106 46.2
Gorai.001G119900 Gossypium raimondii HOM05D008128 ORTHO05D010259 2.7e-06 55.5 53 60.4
GSVIVG01031392001 Vitis vinifera HOM05D008128 ORTHO05D010259 2.7e-06 55.5 63 49.2


User provided reference genes

Program Settings