Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g08199 Brassica carinata HOM05D000040 ORTHO05D000267 2.7e-26 121.3 66 100.0
BraA04t17708Z Brassica rapa HOM05D000040 ORTHO05D000267 1.8e-22 108.6 65 92.3
BcaB06g28196 Brassica carinata HOM05D000040 ORTHO05D000267 4.5e-21 104.0 65 90.8
A04p21410 Brassica napus HOM05D000040 ORTHO05D000267 1.5e-19 99.0 56 94.6
BcaC02g08195 Brassica carinata HOM05D000040 ORTHO05D000267 2.5e-19 98.2 65 86.2
C04p57390 Brassica napus HOM05D000040 ORTHO05D000267 2.5e-19 98.2 65 86.2
BolC4t27263H Brassica oleracea HOM05D000040 ORTHO05D000267 2.5e-19 98.2 65 86.2
BcaC02g08168 Brassica carinata HOM05D000040 ORTHO05D000267 3.3e-19 97.8 65 86.2
C04p57670 Brassica napus HOM05D000040 ORTHO05D000267 3.3e-19 97.8 65 86.2
BraA04t17723Z Brassica rapa HOM05D000040 ORTHO05D000267 3.3e-19 97.8 65 86.2
A04p21420 Brassica napus HOM05D000040 ORTHO05D000267 1.2e-18 95.9 65 84.6
BraA04t17709Z Brassica rapa HOM05D000040 ORTHO05D000267 1.2e-18 95.9 65 84.6
A04p21580 Brassica napus HOM05D000040 ORTHO05D000267 1.6e-18 95.5 65 84.6
BolC4t27287H Brassica oleracea HOM05D000040 ORTHO05D000267 1.6e-18 95.5 65 84.6
BcaB06g28197 Brassica carinata HOM05D000040 ORTHO05D000267 6.8e-17 90.1 66 81.8
BolC5t35108H Brassica oleracea HOM05D000040 ORTHO05D000267 2.2e-15 85.1 66 74.2
BcaB06g28216 Brassica carinata HOM05D000040 ORTHO05D000267 3.7e-15 84.3 66 78.8
C09p75510 Brassica napus HOM05D000040 ORTHO05D000267 1.8e-14 82.0 66 72.7
BolC4t26898H Brassica oleracea HOM05D000040 ORTHO05D000267 1.8e-14 82.0 66 72.7
BcaB02g10163 Brassica carinata HOM05D000040 ORTHO05D000267 4.0e-09 64.3 57 61.4
Sp4g11030 Schrenkiella parvula HOM05D000040 ORTHO05D000267 4.0e-09 64.3 57 66.7
BraA05t23164Z Brassica rapa HOM05D000040 ORTHO05D000267 5.2e-09 63.9 50 74.0
C01p39940 Brassica napus HOM05D000040 ORTHO05D000267 6.8e-09 63.5 65 66.2
BolC1t03949H Brassica oleracea HOM05D000040 ORTHO05D000267 6.8e-09 63.5 65 66.2
Sp4g11310 Schrenkiella parvula HOM05D000040 ORTHO05D000267 6.8e-09 63.5 57 64.9
Sp5g17010 Schrenkiella parvula HOM05D000040 ORTHO05D000267 8.9e-09 63.2 57 61.4
A07p19050 Brassica napus HOM05D000040 ORTHO05D000267 1.2e-08 62.8 54 64.8
BraA07t29610Z Brassica rapa HOM05D000040 ORTHO05D000267 1.2e-08 62.8 54 64.8
A01p31350 Brassica napus HOM05D000040 ORTHO05D000267 1.5e-08 62.4 65 66.2
BraA01t03260Z Brassica rapa HOM05D000040 ORTHO05D000267 1.5e-08 62.4 65 66.2
BraA03t12300Z Brassica rapa HOM05D000040 ORTHO05D000267 2.6e-08 61.6 65 63.1
CARHR121140 Cardamine hirsuta HOM05D000040 ORTHO05D000267 7.5e-08 60.1 58 63.8
AL4G22190 Arabidopsis lyrata HOM05D000040 ORTHO05D000267 2.2e-07 58.5 57 66.7
Thhalv10002859m.g Eutrema salsugineum HOM05D000040 ORTHO05D000267 4.9e-07 57.4 65 56.9
A03p31210 Brassica napus HOM05D000040 ORTHO05D000267 4.1e-06 54.3 58 62.1


User provided reference genes

Program Settings