Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g08196 Brassica carinata HOM05D009238 ORTHO05D011709 8.3e-32 139.8 73 100.0
BcaB03g15929 Brassica carinata HOM05D000496 ORTHO05D000411 4.7e-11 70.9 47 76.6
BcaB04g17452 Brassica carinata HOM05D009238 ORTHO05D019868 1.8e-10 68.9 49 71.4
BolC2t08494H Brassica oleracea HOM05D009238 ORTHO05D012489 4.0e-10 67.8 49 69.4
BraA03t12194Z Brassica rapa HOM05D009238 ORTHO05D012489 5.2e-10 67.4 54 66.7
BolC4t26715H Brassica oleracea HOM05D001239 ORTHO05D011709 6.8e-10 67.0 70 54.3
BolC6t38778H Brassica oleracea HOM05D009238 ORTHO05D012489 8.9e-10 66.6 51 66.7
BcaC09g49165 Brassica carinata HOM05D000032 ORTHO05D000925 1.2e-09 66.2 49 67.3
BcaC04g21866 Brassica carinata HOM05D011670 ORTHO05D012489 1.5e-09 65.9 46 69.6
BcaC02g09623 Brassica carinata HOM05D002743 ORTHO05D002895 2.0e-09 65.5 52 63.5
C05p15940 Brassica napus HOM05D009238 ORTHO05D021611 2.0e-09 65.5 62 58.1
BolC4t26060H Brassica oleracea HOM05D009238 ORTHO05D012489 2.0e-09 65.5 52 63.5
BolC2t07633H Brassica oleracea HOM05D009238 ORTHO05D019868 4.4e-09 64.3 49 67.3
BcaC01g01482 Brassica carinata HOM05D009238 ORTHO05D021611 5.8e-09 63.9 62 56.5
C05p23240 Brassica napus HOM05D009238 ORTHO05D021611 5.8e-09 63.9 62 56.5
BcaC01g06924 Brassica carinata HOM05D000496 ORTHO05D000411 7.5e-09 63.5 47 68.1
BcaB07g32141 Brassica carinata HOM05D000496 ORTHO05D000411 9.8e-09 63.2 47 63.8
BcaC04g19167 Brassica carinata HOM05D000496 ORTHO05D000411 9.8e-09 63.2 47 61.7
C04p60320 Brassica napus HOM05D011670 ORTHO05D027357 9.8e-09 63.2 53 66.0
BcaC03g18002 Brassica carinata HOM05D016815 ORTHO05D020093 1.3e-08 62.8 47 70.2
BcaC06g36045 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-08 62.8 47 61.7
C02p60610 Brassica napus HOM05D016815 ORTHO05D020093 1.3e-08 62.8 47 70.2
C05p09640 Brassica napus HOM05D011670 ORTHO05D027357 1.3e-08 62.8 53 66.0
BraA04t17766Z Brassica rapa HOM05D001239 ORTHO05D024427 1.3e-08 62.8 69 49.3
A04p06620 Brassica napus HOM05D009238 ORTHO05D012489 1.7e-08 62.4 60 60.0
BcaC01g03871 Brassica carinata HOM05D001239 ORTHO05D011709 2.2e-08 62.0 47 68.1
BraA10t43824Z Brassica rapa HOM05D001239 ORTHO05D000925 2.9e-08 61.6 58 58.6
BcaC05g25304 Brassica carinata HOM05D000508 ORTHO05D000371 3.7e-08 61.2 54 61.1
C05p11830 Brassica napus HOM05D001239 ORTHO05D033080 3.7e-08 61.2 54 61.1
BolC5t29932H Brassica oleracea HOM05D001239 ORTHO05D033080 3.7e-08 61.2 54 61.1
BcaB07g33550 Brassica carinata HOM05D001239 ORTHO05D011709 4.9e-08 60.8 47 68.1
A02p36830 Brassica napus HOM05D009238 ORTHO05D012489 4.9e-08 60.8 46 65.2
C03p31480 Brassica napus HOM05D009238 ORTHO05D021611 4.9e-08 60.8 62 54.8
C06p11850 Brassica napus HOM05D009238 ORTHO05D012489 4.9e-08 60.8 72 50.0
BraA02t08674Z Brassica rapa HOM05D009238 ORTHO05D012489 4.9e-08 60.8 46 65.2
BcaC01g00485 Brassica carinata HOM05D000496 ORTHO05D000411 6.4e-08 60.5 71 46.5
C01p30110 Brassica napus HOM05D001239 ORTHO05D023908 6.4e-08 60.5 66 51.5
BolC1t02956H Brassica oleracea HOM05D001239 ORTHO05D023908 6.4e-08 60.5 66 51.5
BolC2t08478H Brassica oleracea HOM05D001239 ORTHO05D024427 6.4e-08 60.5 69 49.3
BcaC06g33741 Brassica carinata HOM05D000496 ORTHO05D000411 8.3e-08 60.1 46 65.2
BcaB01g02634 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-07 59.7 48 58.3
C03p47070 Brassica napus HOM05D016815 ORTHO05D020093 1.1e-07 59.7 64 53.1
BraA03t13842Z Brassica rapa HOM05D009238 ORTHO05D020093 1.1e-07 59.7 61 52.5
BcaC07g39368 Brassica carinata HOM05D009238 ORTHO05D012489 1.4e-07 59.3 52 57.7
BolC2t10713H Brassica oleracea HOM05D001239 ORTHO05D011709 1.4e-07 59.3 86 46.5
BolC9t57963H Brassica oleracea HOM05D011670 ORTHO05D020093 1.9e-07 58.9 58 55.2
BcaC04g22514 Brassica carinata HOM05D001239 ORTHO05D027739 2.4e-07 58.5 72 51.4
C07p03520 Brassica napus HOM05D001239 ORTHO05D027739 3.2e-07 58.2 70 50.0
BraA04t16367Z Brassica rapa HOM05D009238 ORTHO05D012489 3.2e-07 58.2 60 58.3
BcaC02g10496 Brassica carinata HOM05D011670 ORTHO05D012489 5.4e-07 57.4 47 61.7
C03p49130 Brassica napus HOM05D014076 ORTHO05D024532 5.4e-07 57.4 45 62.2
C08p14340 Brassica napus HOM05D001239 ORTHO05D024532 5.4e-07 57.4 46 65.2
BolC7t40747H Brassica oleracea HOM05D001239 ORTHO05D027739 5.4e-07 57.4 70 50.0
BcaC03g17080 Brassica carinata HOM05D009700 ORTHO05D012032 7.0e-07 57.0 48 58.3
BcaC09g49677 Brassica carinata HOM05D000496 ORTHO05D011709 7.0e-07 57.0 53 62.3
A10p14470 Brassica napus HOM05D011670 ORTHO05D027274 7.0e-07 57.0 46 63.0
C01p34040 Brassica napus HOM05D001239 ORTHO05D011709 7.0e-07 57.0 53 62.3
C06p15150 Brassica napus HOM05D016815 ORTHO05D020093 7.0e-07 57.0 71 47.9
BolC1t03373H Brassica oleracea HOM05D001239 ORTHO05D011709 7.0e-07 57.0 53 62.3
BolC6t36689H Brassica oleracea HOM05D016815 ORTHO05D020093 7.0e-07 57.0 71 47.9
BolC6t37993H Brassica oleracea HOM05D005254 ORTHO05D012489 7.0e-07 57.0 72 47.2
BcaB03g11924 Brassica carinata HOM05D001239 ORTHO05D011709 9.2e-07 56.6 66 51.5
BcaC04g22862 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-06 56.2 47 59.6
BcaB03g14365 Brassica carinata HOM05D011670 ORTHO05D027274 2.0e-06 55.5 47 59.6
A10p16820 Brassica napus HOM05D016815 ORTHO05D012489 2.0e-06 55.5 46 58.7
BcaC08g47032 Brassica carinata HOM05D009238 ORTHO05D012489 2.7e-06 55.1 47 66.0
C07p04310 Brassica napus HOM05D001239 ORTHO05D011709 2.7e-06 55.1 57 50.9
BraA10t43537Z Brassica rapa HOM05D011670 ORTHO05D027274 4.6e-06 54.3 78 50.0
BcaB06g25898 Brassica carinata HOM05D011670 ORTHO05D012489 6.0e-06 53.9 55 56.4
BcaC03g16856 Brassica carinata HOM05D009238 ORTHO05D019868 6.0e-06 53.9 49 59.2
C03p49160 Brassica napus HOM05D014076 ORTHO05D024532 6.0e-06 53.9 45 57.8
C03p87880 Brassica napus HOM05D001239 ORTHO05D033080 6.0e-06 53.9 47 57.4
C09p42620 Brassica napus HOM05D001239 ORTHO05D011709 6.0e-06 53.9 47 63.8
BolC3t17197H Brassica oleracea HOM05D014076 ORTHO05D024532 6.0e-06 53.9 45 57.8
BraA01t02545Z Brassica rapa HOM05D009238 ORTHO05D021611 6.0e-06 53.9 71 47.9
BcaC02g09195 Brassica carinata HOM05D001239 ORTHO05D031919 7.8e-06 53.5 65 52.3
C04p30980 Brassica napus HOM05D001035 ORTHO05D021752 7.8e-06 53.5 47 57.4


User provided reference genes

Program Settings