Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g08171 Brassica carinata HOM05D000986 ORTHO05D000794 2.4e-32 141.4 63 100.0
Sp4g11240 Schrenkiella parvula HOM05D000986 ORTHO05D000794 1.1e-21 105.9 59 83.1
Carub.0004s0937 Capsella rubella HOM05D000986 ORTHO05D000794 2.1e-20 101.7 58 82.8
AL4G21600 Arabidopsis lyrata HOM05D000986 ORTHO05D000794 4.8e-20 100.5 59 79.7
A07p18990 Brassica napus HOM05D000986 ORTHO05D000794 4.8e-20 100.5 59 79.7
C04p22960 Brassica napus HOM05D000986 ORTHO05D000794 4.8e-20 100.5 59 79.7
BolC4t23790H Brassica oleracea HOM05D000986 ORTHO05D000794 4.8e-20 100.5 59 79.7
BraA07t29604Z Brassica rapa HOM05D000986 ORTHO05D000794 4.8e-20 100.5 59 79.7
BcaNung07073 Brassica carinata HOM05D000986 ORTHO05D000794 6.3e-20 100.1 59 79.7
Thhalv10017750m.g Eutrema salsugineum HOM05D000986 ORTHO05D000794 1.4e-19 99.0 59 78.0
AT2G28420 Arabidopsis thaliana HOM05D000986 ORTHO05D000794 3.1e-19 97.8 59 79.7
CARHR121370 Cardamine hirsuta HOM05D000986 ORTHO05D000794 2.6e-18 94.7 58 75.9
Aa31LG8G5270 Aethionema arabicum HOM05D000986 ORTHO05D000794 5.0e-17 90.5 57 73.7
PSO135G0164 Papaver somniferum HOM05D000986 ORTHO05D000794 5.5e-16 87.0 57 73.7
Lsat_1_v5_gn_4_32020 Lactuca sativa HOM05D000986 ORTHO05D000794 3.6e-15 84.3 58 69.0
ECA234G2712 Erigeron canadensis HOM05D000986 ORTHO05D000794 4.6e-15 84.0 58 65.5
PSO384G4291 Papaver somniferum HOM05D000986 ORTHO05D000794 4.6e-15 84.0 48 77.1
Migut.N01804 Erythranthe guttata HOM05D000986 ORTHO05D000794 1.0e-14 82.8 61 65.6
Oeu051419.1 Olea europaea HOM05D000986 ORTHO05D000794 1.0e-14 82.8 58 67.2
Hund31461 Selenicereus undatus HOM05D000986 ORTHO05D000794 1.0e-14 82.8 59 69.5
CAN.G909.17 Capsicum annuum HOM05D000986 ORTHO05D000794 1.3e-14 82.4 58 65.5
DCAR_001920 Daucus carota HOM05D000986 ORTHO05D000794 1.8e-14 82.0 58 69.0
Peaxi162Scf01108g00329 Petunia axillaris HOM05D000986 ORTHO05D000794 1.8e-14 82.0 58 65.5
Solyc01g088010.1 Solanum lycopersicum HOM05D000986 ORTHO05D000794 3.0e-14 81.3 58 65.5
PGSC0003DMG400006834 Solanum tuberosum HOM05D000986 ORTHO05D000794 3.0e-14 81.3 58 65.5
FAN03G1256 Fragaria x ananassa HOM05D000986 ORTHO05D000794 3.9e-14 80.9 57 70.2
GSVIVG01001440001 Vitis vinifera HOM05D000986 ORTHO05D000794 3.9e-14 80.9 58 67.2
Aqoxy2G00216 Aquilegia oxysepala HOM05D000986 ORTHO05D000794 6.7e-14 80.1 47 72.3
HanXRQChr17g0563121 Helianthus annuus HOM05D000986 ORTHO05D000794 6.7e-14 80.1 58 63.8
EL10Ac5g10517 Beta vulgaris HOM05D000986 ORTHO05D000794 1.1e-13 79.3 59 64.4
Atru.chr11.2542 Acer truncatum HOM05D000986 ORTHO05D000794 1.5e-13 79.0 60 65.0
Sc14g0004960 Simmondsia chinensis HOM05D000986 ORTHO05D000794 1.5e-13 79.0 59 64.4
AUR62032301 Chenopodium quinoa HOM05D000986 ORTHO05D000794 1.9e-13 78.6 59 62.7
Nitab4.5_0006695g0050 Nicotiana tabacum HOM05D000986 ORTHO05D000794 1.9e-13 78.6 58 62.1
Dinv07426 Davidia involucrata HOM05D000986 ORTHO05D000794 2.5e-13 78.2 58 65.5
CANSAT80G0072 Cannabis sativa HOM05D000986 ORTHO05D000794 3.3e-13 77.8 60 61.7
Nitab4.5_0002888g0020 Nicotiana tabacum HOM05D000986 ORTHO05D000794 3.3e-13 77.8 57 63.2
TAR636G1666 Trochodendron aralioides HOM05D000986 ORTHO05D000794 3.3e-13 77.8 58 65.5
FvH4_7g01840 Fragaria vesca HOM05D000986 ORTHO05D000794 4.3e-13 77.4 57 66.7
FAN06G1695 Fragaria x ananassa HOM05D000986 ORTHO05D000794 4.3e-13 77.4 57 66.7
FAN10G0340 Fragaria x ananassa HOM05D000986 ORTHO05D000794 5.7e-13 77.0 57 68.4
Eucgr.G03282 Eucalyptus grandis HOM05D000986 ORTHO05D000794 7.4e-13 76.6 58 65.5
MD07G1024800 Malus domestica HOM05D000986 ORTHO05D000794 7.4e-13 76.6 46 73.9
TWI09G1595 Tripterygium wilfordii HOM05D000986 ORTHO05D000794 7.4e-13 76.6 58 63.8
arahy.Tifrunner.gnm1.ann1.9T2EYF Arachis hypogaea HOM05D000986 ORTHO05D000794 9.7e-13 76.3 45 75.6
arahy.Tifrunner.gnm1.ann1.KSBN30 Arachis hypogaea HOM05D000986 ORTHO05D000794 9.7e-13 76.3 45 75.6
Ca_26318_v3 Cicer arietinum L. HOM05D000986 ORTHO05D000794 9.7e-13 76.3 55 65.5
BolC4t27284H Brassica oleracea HOM05D000986 ORTHO05D000794 1.3e-12 75.9 59 66.1
Nn7g36347 Nelumbo nucifera HOM05D000986 ORTHO05D000794 1.3e-12 75.9 58 62.1
Os07g0657100 Oryza sativa ssp. japonica HOM05D000986 ORTHO05D000794 1.3e-12 75.9 58 58.6
CiPaw.14G003900 Carya illinoinensis HOM05D000986 ORTHO05D000794 1.6e-12 75.5 47 70.2
PGR142G0875 Punica granatum HOM05D000986 ORTHO05D000794 1.6e-12 75.5 58 62.1
SGA_v2.0_scaffold5G02948 Striga asiatica HOM05D000986 ORTHO05D000794 1.6e-12 75.5 64 57.8
COL.COLO4_12329 Corchorus olitorius HOM05D000986 ORTHO05D000794 2.2e-12 75.1 46 73.9
Gohir.A12G100300 Gossypium hirsutum HOM05D000986 ORTHO05D000794 2.2e-12 75.1 46 73.9
Gohir.D12G103300 Gossypium hirsutum HOM05D000986 ORTHO05D000794 2.2e-12 75.1 46 73.9
Gorai.008G112300 Gossypium raimondii HOM05D000986 ORTHO05D000794 2.2e-12 75.1 46 73.9
Medtr0003s0630 Medicago truncatula HOM05D000986 ORTHO05D000794 2.8e-12 74.7 44 70.5
Hund09527 Selenicereus undatus HOM05D030513 ORTHO05D000794 2.8e-12 74.7 47 72.3
Lj3g0002168 Lotus japonicus HOM05D000986 ORTHO05D000794 3.7e-12 74.3 56 62.5
Haze_03130 Corylus avellana HOM05D000986 ORTHO05D000794 4.8e-12 73.9 54 66.7
Manes.07G011800 Manihot esculenta HOM05D000986 ORTHO05D000794 4.8e-12 73.9 56 64.3
Cfa010824 Carpinus fangiana HOM05D000986 ORTHO05D000794 8.2e-12 73.2 44 72.7
ClCG09G004470 Citrullus lanatus HOM05D000986 ORTHO05D000794 8.2e-12 73.2 47 61.7
MELO3C023589.2 Cucumis melo HOM05D000986 ORTHO05D000794 8.2e-12 73.2 46 67.4
CsaV3_7G030670 Cucumis sativus L. HOM05D000986 ORTHO05D000794 8.2e-12 73.2 46 67.4
Prupe.2G024500 Prunus persica HOM05D000986 ORTHO05D000794 1.1e-11 72.8 46 67.4
Thecc.01G404300 Theobroma cacao HOM05D000986 ORTHO05D000794 1.8e-11 72.0 46 69.6
Cpa.g.sc125.57 Carica papaya HOM05D000986 ORTHO05D000794 3.1e-11 71.2 44 70.5
Lalb_Chr15g0083601 Lupinus albus HOM05D000986 ORTHO05D000794 3.1e-11 71.2 44 65.9
CDE02G2579 Ceratophyllum demersum HOM05D002567 ORTHO05D007435 5.3e-11 70.5 47 68.1
VMungo1127G0751 Vigna mungo HOM05D000986 ORTHO05D000794 5.3e-11 70.5 44 65.9
Potri.009G055500 Populus trichocarpa HOM05D000986 ORTHO05D000794 6.9e-11 70.1 46 67.4
QL04p010481 Quercus lobata HOM05D000986 ORTHO05D000794 6.9e-11 70.1 46 67.4
Sabra09G0040600 Salix brachista HOM05D000986 ORTHO05D000794 1.5e-10 68.9 46 65.2
Sed0020072 Sechium edule HOM05D000986 ORTHO05D000794 6.5e-09 63.5 58 51.7
Duzib138G0876 Durio zibethinus HOM05D000986 ORTHO05D000794 3.2e-08 61.2 38 73.7
SEGI_15187 Sequoiadendron giganteum HOM05D000986 ORTHO05D000794 3.2e-08 61.2 49 59.2
SEGI_20910 Sequoiadendron giganteum HOM05D000986 ORTHO05D000794 3.2e-08 61.2 49 59.2
AUR62011987 Chenopodium quinoa HOM05D000986 ORTHO05D000035 5.5e-08 60.5 42 66.7
MSTRG.20319 Avicennia marina HOM05D000986 ORTHO05D000794 7.9e-07 56.6 55 49.1
Oeu049814.2 Olea europaea HOM05D000986 ORTHO05D000794 7.9e-07 56.6 42 52.4
Phvul.006G218600 Phaseolus vulgaris HOM05D000986 ORTHO05D000794 7.9e-07 56.6 37 59.5
PGR142G3588 Punica granatum HOM05D000986 ORTHO05D000794 7.9e-07 56.6 44 50.0
Actinidia39008 Actinidia chinensis HOM05D000986 ORTHO05D000794 2.3e-06 55.1 42 52.4
Potri.003G009000 Populus trichocarpa HOM05D000986 ORTHO05D000794 3.0e-06 54.7 36 61.1
Actinidia00180 Actinidia chinensis HOM05D000986 ORTHO05D000794 3.9e-06 54.3 37 56.8
Haze_03151 Corylus avellana HOM05D000089 ORTHO05D000104 3.9e-06 54.3 26 84.6
DCAR_005552 Daucus carota HOM05D000986 ORTHO05D000794 3.9e-06 54.3 51 49.0
Dinv07478 Davidia involucrata HOM05D000986 ORTHO05D000794 3.9e-06 54.3 37 56.8
Migut.B00781 Erythranthe guttata HOM05D000986 ORTHO05D000794 3.9e-06 54.3 37 56.8
Lj9A299T36 Lonicera japonica HOM05D000986 ORTHO05D000794 3.9e-06 54.3 46 52.2
Oeu045932.1 Olea europaea HOM05D000986 ORTHO05D000794 3.9e-06 54.3 37 56.8
SEGI_17522 Sequoiadendron giganteum HOM05D000986 ORTHO05D000794 3.9e-06 54.3 33 60.6
SEGI_30711 Sequoiadendron giganteum HOM05D000986 ORTHO05D000794 3.9e-06 54.3 33 60.6
HPP92_005147 Vanilla planifolia HOM05D000986 ORTHO05D000794 3.9e-06 54.3 32 65.6
HPP92_005150 Vanilla planifolia HOM05D000986 ORTHO05D000794 3.9e-06 54.3 32 65.6
HPP92_008651 Vanilla planifolia HOM05D000986 ORTHO05D000794 3.9e-06 54.3 37 62.2
Nn1g08481 Nelumbo nucifera HOM05D000986 ORTHO05D000794 5.1e-06 53.9 48 52.1
CSS0002351 Camellia sinensis var. sinensis HOM05D000986 ORTHO05D000794 6.7e-06 53.5 37 56.8
CSS0006178 Camellia sinensis var. sinensis HOM05D000986 ORTHO05D000794 6.7e-06 53.5 37 56.8
CDE04G0314 Ceratophyllum demersum HOM05D000986 ORTHO05D000794 6.7e-06 53.5 30 70.0
Cc02_g23060 Coffea canephora HOM05D000986 ORTHO05D000794 6.7e-06 53.5 36 58.3
DCAR_025493 Daucus carota HOM05D000986 ORTHO05D000794 6.7e-06 53.5 51 47.1
PSO017G1349 Papaver somniferum HOM05D000986 ORTHO05D000794 6.7e-06 53.5 56 44.6
PGR042G1515 Punica granatum HOM05D000986 ORTHO05D000794 6.7e-06 53.5 52 48.1
VMungo0540G0171 Vigna mungo HOM05D000986 ORTHO05D000794 6.7e-06 53.5 37 56.8
DCAR_006676 Daucus carota HOM05D000986 ORTHO05D000794 8.8e-06 53.1 37 51.4
Eucgr.G00342 Eucalyptus grandis HOM05D000986 ORTHO05D000794 8.8e-06 53.1 42 52.4
PSO541G2049 Papaver somniferum HOM05D000986 ORTHO05D000794 8.8e-06 53.1 30 66.7
Sabra01G0169200 Salix brachista HOM05D000986 ORTHO05D000794 8.8e-06 53.1 37 64.9
SEGI_36450 Sequoiadendron giganteum HOM05D000986 ORTHO05D000794 8.8e-06 53.1 37 59.5
Thecc.02G019600 Theobroma cacao HOM05D000986 ORTHO05D000794 8.8e-06 53.1 41 56.1


User provided reference genes

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