Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g08129 Brassica carinata HOM05D010012 ORTHO05D012171 1.8e-69 265.8 135 100.0
C04p58060 Brassica napus HOM05D010012 ORTHO05D012171 1.8e-69 265.8 135 100.0
BolC4t27332H Brassica oleracea HOM05D010012 ORTHO05D012171 1.8e-69 265.8 135 100.0
A04p21920 Brassica napus HOM05D010012 ORTHO05D012171 3.6e-65 251.5 135 94.8
BcaB06g28260 Brassica carinata HOM05D010012 ORTHO05D012171 7.5e-55 217.2 143 79.7
Sp4g11680 Schrenkiella parvula HOM05D010012 ORTHO05D012171 8.3e-46 187.2 141 72.3
BcaC01g04994 Brassica carinata HOM05D010012 ORTHO05D012171 1.1e-45 186.8 143 71.3
C03p31310 Brassica napus HOM05D010012 ORTHO05D012171 1.1e-45 186.8 143 71.3
BolC3t15480H Brassica oleracea HOM05D010012 ORTHO05D012171 1.1e-45 186.8 143 71.3
BraA03t11837Z Brassica rapa HOM05D010012 ORTHO05D012171 2.4e-45 185.7 143 71.3
A03p26230 Brassica napus HOM05D010012 ORTHO05D012171 2.1e-44 182.6 143 70.6
BcaB01g03127 Brassica carinata HOM05D010012 ORTHO05D012171 2.3e-43 179.1 143 69.9
Thhalv10017378m.g Eutrema salsugineum HOM05D010012 ORTHO05D012171 9.5e-42 173.7 149 68.5
BcaB02g10207 Brassica carinata HOM05D010012 ORTHO05D012171 2.1e-41 172.6 136 68.4
BcaC02g11018 Brassica carinata HOM05D010012 ORTHO05D012171 2.9e-38 162.2 136 66.9
C04p22150 Brassica napus HOM05D010012 ORTHO05D012171 2.9e-38 162.2 136 66.9
BolC4t23735H Brassica oleracea HOM05D010012 ORTHO05D012171 2.9e-38 162.2 136 66.9
A07p19320 Brassica napus HOM05D010012 ORTHO05D012171 4.1e-37 158.3 143 62.9
BraA07t29637Z Brassica rapa HOM05D010012 ORTHO05D012171 4.1e-37 158.3 143 62.9
AL4G23400 Arabidopsis lyrata HOM05D010012 ORTHO05D012171 9.2e-37 157.1 160 60.6
CARHR122020 Cardamine hirsuta HOM05D010012 ORTHO05D012171 2.1e-36 156.0 159 60.4
AT2G28870 Arabidopsis thaliana HOM05D010012 ORTHO05D012171 1.9e-34 149.4 158 60.1
Carub.0004s0986 Capsella rubella HOM05D010012 ORTHO05D012171 4.3e-34 148.3 158 58.9
Dinv16991 Davidia involucrata HOM05D005967 ORTHO05D005174 4.3e-10 68.6 148 38.5
Dinv42940 Davidia involucrata HOM05D005967 ORTHO05D005174 4.3e-10 68.6 148 38.5
Dinv43160 Davidia involucrata HOM05D005967 ORTHO05D005174 4.3e-10 68.6 148 38.5
DCAR_005325 Daucus carota HOM05D005967 ORTHO05D005174 2.1e-09 66.2 85 48.2
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 2.0e-07 59.7 164 34.8
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 2.6e-07 59.3 115 39.1
Potri.009G030200 Populus trichocarpa HOM05D005967 ORTHO05D005174 2.6e-07 59.3 94 38.3
Duzib150G1094 Durio zibethinus HOM05D005967 ORTHO05D005174 5.8e-07 58.2 81 45.7
COL.COLO4_18500 Corchorus olitorius HOM05D005967 ORTHO05D005174 1.3e-06 57.0 76 46.1
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 1.7e-06 56.6 79 45.6
Duzib170G1125 Durio zibethinus HOM05D005967 ORTHO05D005174 2.9e-06 55.8 100 38.0
Gorai.003G132600 Gossypium raimondii HOM05D005967 ORTHO05D005174 3.8e-06 55.5 81 43.2
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 3.8e-06 55.5 86 38.4


User provided reference genes

Program Settings