Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g08127 Brassica carinata HOM05D001082 ORTHO05D005120 1.5e-56 222.6 111 100.0
C04p58080 Brassica napus HOM05D001082 ORTHO05D005120 1.2e-55 219.5 109 100.0
BolC4t27334H Brassica oleracea HOM05D001082 ORTHO05D005120 2.1e-55 218.8 111 99.1
BcaB03g13701 Brassica carinata HOM05D001082 ORTHO05D005120 3.2e-27 125.2 113 60.2
BcaC02g08190 Brassica carinata HOM05D001082 ORTHO05D005120 4.2e-27 124.8 119 61.3
C04p57470 Brassica napus HOM05D001082 ORTHO05D005120 4.2e-27 124.8 119 61.3
BolC4t27268H Brassica oleracea HOM05D001082 ORTHO05D005120 1.3e-25 119.8 122 59.0
A05p24320 Brassica napus HOM05D001082 ORTHO05D005120 3.0e-25 118.6 114 57.9
BraA05t21326Z Brassica rapa HOM05D001082 ORTHO05D005120 3.0e-25 118.6 114 57.9
BolC5t32536H Brassica oleracea HOM05D001082 ORTHO05D005120 3.9e-25 118.2 113 59.3
Sp1g28860 Schrenkiella parvula HOM05D001082 ORTHO05D005120 6.7e-25 117.5 121 55.4
BcaC05g27806 Brassica carinata HOM05D001082 ORTHO05D005120 1.1e-24 116.7 113 58.4
C05p38080 Brassica napus HOM05D001082 ORTHO05D005120 1.1e-24 116.7 113 58.4
AL1G47790 Arabidopsis lyrata HOM05D001082 ORTHO05D005120 1.5e-24 116.3 123 56.1
AT1G33410 Arabidopsis thaliana HOM05D001082 ORTHO05D005120 4.8e-23 111.3 122 53.3
CARHR032850 Cardamine hirsuta HOM05D001082 ORTHO05D005120 6.2e-23 110.9 116 55.2
Thhalv10006552m.g Eutrema salsugineum HOM05D001082 ORTHO05D005120 6.2e-23 110.9 123 53.7
Aa31LG6G7920 Aethionema arabicum HOM05D001082 ORTHO05D005120 4.5e-21 104.8 122 49.2
THA.LOC104806485 Tarenaya hassleriana HOM05D001082 ORTHO05D005120 2.3e-17 92.4 103 54.4
Lsat_1_v5_gn_7_54700 Lactuca sativa HOM05D001082 ORTHO05D005120 1.7e-12 76.3 102 45.1
ECA238G2349 Erigeron canadensis HOM05D001082 ORTHO05D005120 3.8e-12 75.1 92 42.4
Potri.001G078600 Populus trichocarpa HOM05D001082 ORTHO05D005120 5.0e-12 74.7 109 42.2
Sabra01G0055900 Salix brachista HOM05D001082 ORTHO05D005120 6.5e-12 74.3 109 42.2
CiPaw.02G126600 Carya illinoinensis HOM05D001082 ORTHO05D005120 4.2e-11 71.6 104 43.3
COL.COLO4_31206 Corchorus olitorius HOM05D001082 ORTHO05D005120 5.5e-11 71.2 101 40.6
HanXRQChr14g0452101 Helianthus annuus HOM05D001082 ORTHO05D005120 1.2e-10 70.1 99 40.4
ECA233G1839 Erigeron canadensis HOM05D001082 ORTHO05D005120 2.7e-10 68.9 92 41.3
TAR339G0004 Trochodendron aralioides HOM05D001082 ORTHO05D005120 4.6e-10 68.2 97 42.3
TAR629G2955 Trochodendron aralioides HOM05D001082 ORTHO05D005120 4.6e-10 68.2 96 41.7
Cpa.g.sc21.222 Carica papaya HOM05D001082 ORTHO05D005120 7.9e-10 67.4 109 35.8
ECA233G1970 Erigeron canadensis HOM05D001082 ORTHO05D005120 1.4e-09 66.6 96 39.6
Lj5C310G5 Lonicera japonica HOM05D001082 ORTHO05D005120 3.0e-09 65.5 98 37.8
Hma1.2p1_0052F.1_g030140 Hydrangea macrophylla HOM05D001082 ORTHO05D005120 5.1e-09 64.7 91 36.3
Manes.15G096100 Manihot esculenta HOM05D001082 ORTHO05D005120 5.1e-09 64.7 96 35.4
VMungo0720G1958 Vigna mungo HOM05D001082 ORTHO05D005120 5.1e-09 64.7 99 39.4
GSVIVG01015912001 Vitis vinifera HOM05D001082 ORTHO05D005120 3.3e-08 62.0 104 34.6
Nitab4.5_0000399g0040 Nicotiana tabacum HOM05D001082 ORTHO05D005120 4.3e-08 61.6 98 32.7
Solyc01g102550.4 Solanum lycopersicum HOM05D001082 ORTHO05D005120 4.3e-08 61.6 91 35.2
BcaB06g28204 Brassica carinata HOM05D001082 ORTHO05D005120 5.7e-08 61.2 43 67.4
Ca_11506_v3 Cicer arietinum L. HOM05D001082 ORTHO05D005120 2.2e-07 59.3 95 40.0
Peaxi162Scf00194g00732 Petunia axillaris HOM05D001082 ORTHO05D005120 2.2e-07 59.3 98 36.7
Sopen01g044980 Solanum pennellii HOM05D001082 ORTHO05D005120 2.2e-07 59.3 91 34.1
Nitab4.5_0004090g0140 Nicotiana tabacum HOM05D001082 ORTHO05D005120 6.3e-07 57.8 98 32.7
ATR0810G183 Amborella trichopoda HOM05D001082 ORTHO05D005120 8.2e-07 57.4 92 37.0
PGR042G2652 Punica granatum HOM05D001082 ORTHO05D005120 1.4e-06 56.6 116 37.9
SGA_v2.0_scaffold8G04471 Striga asiatica HOM05D001082 ORTHO05D005120 1.8e-06 56.2 93 40.9


User provided reference genes

Program Settings