Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g08116 Brassica carinata HOM05D000659 ORTHO05D096071 2.3e-57 225.3 110 100.0
BcaC02g08115 Brassica carinata HOM05D000659 ORTHO05D000505 3.8e-20 101.7 166 45.8
Thhalv10016796m.g Eutrema salsugineum HOM05D000659 ORTHO05D000505 3.5e-10 68.6 47 70.2
BcaB02g10226 Brassica carinata HOM05D000659 ORTHO05D000505 4.6e-10 68.2 47 68.1
Aa31LG5G7190 Aethionema arabicum HOM05D000659 ORTHO05D000505 7.8e-10 67.4 47 68.1
CARHR122280 Cardamine hirsuta HOM05D000659 ORTHO05D000505 1.0e-09 67.0 47 68.1
AT2G29050 Arabidopsis thaliana HOM05D000659 ORTHO05D000505 1.3e-09 66.6 47 68.1
BcaC02g11038 Brassica carinata HOM05D000659 ORTHO05D000505 1.3e-09 66.6 47 66.0
A07p19460 Brassica napus HOM05D000659 ORTHO05D000505 1.3e-09 66.6 47 66.0
C04p21910 Brassica napus HOM05D000659 ORTHO05D000505 1.3e-09 66.6 47 66.0
C04p21920 Brassica napus HOM05D000659 ORTHO05D000505 1.3e-09 66.6 47 66.0
BolC4t23710H Brassica oleracea HOM05D000659 ORTHO05D000505 1.3e-09 66.6 47 66.0
BraA07t29652Z Brassica rapa HOM05D000659 ORTHO05D000505 1.3e-09 66.6 47 66.0
Sp4g11860 Schrenkiella parvula HOM05D000659 ORTHO05D000505 1.3e-09 66.6 47 66.0
Carub.0004s1004 Capsella rubella HOM05D000659 ORTHO05D000505 1.7e-09 66.2 47 68.1
AL4G23610 Arabidopsis lyrata HOM05D000659 ORTHO05D000505 3.0e-09 65.5 47 68.1
MD11G1100200 Malus domestica HOM05D000659 ORTHO05D000505 5.6e-08 61.2 47 57.4
Thecc.09G320200 Theobroma cacao HOM05D000659 ORTHO05D000505 5.6e-08 61.2 47 57.4
Cpa.g.sc81.133 Carica papaya HOM05D000659 ORTHO05D000505 1.3e-07 60.1 47 57.4
Duzib168G0711 Durio zibethinus HOM05D000659 ORTHO05D000505 6.2e-07 57.8 47 55.3
Manes.01G172500 Manihot esculenta HOM05D000659 ORTHO05D000505 6.2e-07 57.8 47 55.3
Potri.001G241300 Populus trichocarpa HOM05D000659 ORTHO05D000505 6.2e-07 57.8 47 53.2
Glyma.15G037600 Glycine max HOM05D000659 ORTHO05D000505 1.1e-06 57.0 47 53.2
Duzib150G1642 Durio zibethinus HOM05D000659 ORTHO05D000505 1.4e-06 56.6 47 55.3
TAR636G2006 Trochodendron aralioides HOM05D000659 ORTHO05D000505 1.4e-06 56.6 47 53.2
Prupe.6G074600 Prunus persica HOM05D000659 ORTHO05D000505 1.8e-06 56.2 47 51.1
GSVIVG01024943001 Vitis vinifera HOM05D000659 ORTHO05D000505 1.8e-06 56.2 47 53.2
Lj3g0020272 Lotus japonicus HOM05D000659 ORTHO05D000505 2.4e-06 55.8 47 46.8
Sabra09G0022600 Salix brachista HOM05D000659 ORTHO05D000505 2.4e-06 55.8 47 51.1
TWI75G0518 Tripterygium wilfordii HOM05D000659 ORTHO05D000505 2.4e-06 55.8 47 53.2
MD11G1106000 Malus domestica HOM05D000659 ORTHO05D028294 3.1e-06 55.5 75 36.0
TWI79G0968 Tripterygium wilfordii HOM05D000659 ORTHO05D000505 4.0e-06 55.1 48 52.1
Atru.chr3.3945 Acer truncatum HOM05D000659 ORTHO05D000505 5.3e-06 54.7 46 54.3
Lalb_Chr19g0137871 Lupinus albus HOM05D000659 ORTHO05D000505 5.3e-06 54.7 47 48.9
Manes.02G131700 Manihot esculenta HOM05D000659 ORTHO05D000505 5.3e-06 54.7 47 51.1
Phvul.L006143 Phaseolus vulgaris HOM05D000659 ORTHO05D000505 6.9e-06 54.3 48 47.9
Cfa011515 Carpinus fangiana HOM05D000659 ORTHO05D000505 9.0e-06 53.9 47 48.9
Haze_24112 Corylus avellana HOM05D000659 ORTHO05D000505 9.0e-06 53.9 47 48.9
Potri.009G031900 Populus trichocarpa HOM05D000659 ORTHO05D000505 9.0e-06 53.9 47 48.9


User provided reference genes

Program Settings