Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g08041 Brassica carinata HOM05D004740 ORTHO05D005991 6.6e-205 717.2 387 100.0
C04p59110 Brassica napus HOM05D004740 ORTHO05D005991 1.3e-203 713.0 387 99.2
BolC4t27422H Brassica oleracea HOM05D004740 ORTHO05D005991 1.3e-203 713.0 387 99.2
BraA04t17832Z Brassica rapa HOM05D004740 ORTHO05D005991 7.1e-199 697.2 392 96.4
BcaB06g28350 Brassica carinata HOM05D004740 ORTHO05D005991 6.0e-190 667.5 391 93.1
BolC4t23568H Brassica oleracea HOM05D004740 ORTHO05D005991 5.7e-180 634.4 394 89.8
BcaC02g11103 Brassica carinata HOM05D004740 ORTHO05D005991 9.7e-180 633.6 392 89.0
C04p20390 Brassica napus HOM05D004740 ORTHO05D005991 9.7e-180 633.6 393 89.3
Sp4g12790 Schrenkiella parvula HOM05D004740 ORTHO05D005991 1.6e-179 632.9 401 88.3
A05p15240 Brassica napus HOM05D004740 ORTHO05D005991 4.8e-179 631.3 393 89.3
BraA05t20443Z Brassica rapa HOM05D004740 ORTHO05D005991 6.3e-179 630.9 389 89.5
BcaB02g10307 Brassica carinata HOM05D004740 ORTHO05D005991 2.0e-177 625.9 390 89.2
BolC3t14364H Brassica oleracea HOM05D004740 ORTHO05D005991 2.0e-177 625.9 385 88.1
Thhalv10016751m.g Eutrema salsugineum HOM05D004740 ORTHO05D005991 3.2e-175 618.6 401 87.3
CARHR123500 Cardamine hirsuta HOM05D004740 ORTHO05D005991 2.7e-174 615.5 396 87.1
AT2G30200 Arabidopsis thaliana HOM05D004740 ORTHO05D005991 1.4e-173 613.2 397 86.1
A04p22970 Brassica napus HOM05D004740 ORTHO05D005991 3.7e-171 605.1 342 96.2
Carub.0004s1135 Capsella rubella HOM05D004740 ORTHO05D005991 1.1e-170 603.6 396 86.1
Aa31LG5G6500 Aethionema arabicum HOM05D004740 ORTHO05D005991 1.2e-169 600.1 406 84.5
AL4G25030 Arabidopsis lyrata HOM05D004740 ORTHO05D005991 1.5e-169 599.7 365 89.3
arahy.Tifrunner.gnm1.ann1.MX8U3M Arachis hypogaea HOM05D004740 ORTHO05D005991 3.4e-161 572.0 391 80.1
THA.LOC104826277 Tarenaya hassleriana HOM05D004740 ORTHO05D005991 1.3e-160 570.1 363 83.5
arahy.Tifrunner.gnm1.ann1.FJ253B Arachis hypogaea HOM05D004740 ORTHO05D005991 1.9e-159 566.2 391 79.3
QL01p026440 Quercus lobata HOM05D004740 ORTHO05D005991 2.5e-159 565.8 403 78.2
arahy.Tifrunner.gnm1.ann1.T9C115 Arachis hypogaea HOM05D004740 ORTHO05D005991 5.5e-159 564.7 391 79.8
BcaC01g06023 Brassica carinata HOM05D004740 ORTHO05D005991 5.5e-159 564.7 365 85.2
Gohir.D03G142800 Gossypium hirsutum HOM05D004740 ORTHO05D005991 1.2e-158 563.5 381 79.8
CiPaw.13G069800 Carya illinoinensis HOM05D004740 ORTHO05D005991 2.7e-158 562.4 388 79.6
Lalb_Chr18g0051371 Lupinus albus HOM05D004740 ORTHO05D005991 4.7e-158 561.6 392 77.3
Gohir.A03G025700 Gossypium hirsutum HOM05D004740 ORTHO05D005991 1.0e-157 560.5 381 79.5
BcaB01g04122 Brassica carinata HOM05D004740 ORTHO05D005991 2.3e-157 559.3 365 85.8
MELO3C020514.2 Cucumis melo HOM05D004740 ORTHO05D005991 2.3e-157 559.3 379 80.7
CsaV3_1G036540 Cucumis sativus L. HOM05D004740 ORTHO05D005991 3.0e-157 558.9 364 82.1
Duzib168G1324 Durio zibethinus HOM05D004740 ORTHO05D005991 2.6e-156 555.8 390 78.5
THA.LOC104800771 Tarenaya hassleriana HOM05D004740 ORTHO05D005991 2.6e-156 555.8 365 82.5
CSS0045632 Camellia sinensis var. sinensis HOM05D004740 ORTHO05D005991 9.7e-156 553.9 377 79.3
Haze_24407 Corylus avellana HOM05D004740 ORTHO05D005991 1.7e-155 553.1 376 79.0
TAR623G0659 Trochodendron aralioides HOM05D004740 ORTHO05D005991 1.7e-155 553.1 406 74.4
Dinv28694 Davidia involucrata HOM05D004740 ORTHO05D005991 3.7e-155 552.0 415 73.0
TWI75G0989 Tripterygium wilfordii HOM05D004740 ORTHO05D005991 4.8e-155 551.6 399 76.2
Gorai.003G150000 Gossypium raimondii HOM05D004740 ORTHO05D005991 6.3e-155 551.2 366 80.9
Peaxi162Scf00055g00057 Petunia axillaris HOM05D004740 ORTHO05D005991 6.3e-155 551.2 361 80.3
Potri.009G077800 Populus trichocarpa HOM05D004740 ORTHO05D005991 6.3e-155 551.2 390 78.5
Sed0001589 Sechium edule HOM05D004740 ORTHO05D005991 1.1e-154 550.4 377 80.1
Thecc.09G357100 Theobroma cacao HOM05D004740 ORTHO05D005991 1.1e-154 550.4 390 77.2
Nitab4.5_0002737g0070 Nicotiana tabacum HOM05D004740 ORTHO05D005991 1.4e-154 550.1 402 74.6
COL.COLO4_11143 Corchorus olitorius HOM05D004740 ORTHO05D005991 1.8e-154 549.7 365 81.1
Lj6g0008641 Lotus japonicus HOM05D004740 ORTHO05D005991 2.4e-154 549.3 362 80.9
Ciclev10028558m.g Citrus clementina HOM05D004740 ORTHO05D005991 3.1e-154 548.9 407 74.7
MD03G1055800 Malus domestica HOM05D004740 ORTHO05D005991 9.1e-154 547.4 392 77.3
Manes.18G127700 Manihot esculenta HOM05D004740 ORTHO05D005991 9.1e-154 547.4 402 75.9
Nitab4.5_0001121g0110 Nicotiana tabacum HOM05D004740 ORTHO05D005991 1.2e-153 547.0 404 74.0
Lalb_Chr15g0083211 Lupinus albus HOM05D004740 ORTHO05D005991 1.6e-153 546.6 367 79.8
MD11G1056800 Malus domestica HOM05D004740 ORTHO05D005991 1.6e-153 546.6 392 77.3
Prupe.6G048900 Prunus persica HOM05D004740 ORTHO05D005991 1.6e-153 546.6 392 76.3
Glyma.18G057700 Glycine max HOM05D004740 ORTHO05D005991 2.2e-152 542.7 360 80.0
HanXRQChr01g0012131 Helianthus annuus HOM05D004740 ORTHO05D005991 3.8e-152 542.0 382 77.5
PGR102G2346 Punica granatum HOM05D004740 ORTHO05D005991 3.8e-152 542.0 386 76.9
Cfa011772 Carpinus fangiana HOM05D004740 ORTHO05D005991 6.5e-152 541.2 360 80.6
Sabra09G0059400 Salix brachista HOM05D004740 ORTHO05D005991 6.5e-152 541.2 389 77.4
FvH4_3g39690 Fragaria vesca HOM05D004740 ORTHO05D005991 1.5e-151 540.0 387 76.0
vmacro02923 Vaccinium macrocarpon HOM05D004740 ORTHO05D005991 1.5e-151 540.0 377 76.9
CANSAT54G2578 Cannabis sativa HOM05D004740 ORTHO05D005991 1.9e-151 539.7 400 73.8
Phvul.006G073300 Phaseolus vulgaris HOM05D004740 ORTHO05D005991 1.9e-151 539.7 362 79.8
RcHm_v2.0_Chr5g0071571 Rosa chinensis HOM05D004740 ORTHO05D005991 4.2e-151 538.5 390 75.6
Lj2A1092T52 Lonicera japonica HOM05D004740 ORTHO05D005991 5.5e-151 538.1 375 76.8
Psat5g153440 Pisum sativum HOM05D004740 ORTHO05D005991 7.2e-151 537.7 378 76.5
Solyc01g006980.4 Solanum lycopersicum HOM05D004740 ORTHO05D005991 7.2e-151 537.7 365 79.2
ClCG03G000380 Citrullus lanatus HOM05D004740 ORTHO05D005991 9.4e-151 537.3 407 73.0
Ah.15g096090 Amaranthus hybridus HOM05D004740 ORTHO05D005991 1.2e-150 537.0 378 76.5
Ca_15002_v3 Cicer arietinum L. HOM05D004740 ORTHO05D005991 1.6e-150 536.6 365 79.5
arahy.Tifrunner.gnm1.ann1.C8ZV0S Arachis hypogaea HOM05D004740 ORTHO05D005991 2.1e-150 536.2 401 74.6
Glyma.11G164500 Glycine max HOM05D004740 ORTHO05D005991 2.7e-150 535.8 334 82.9
Rhsim13G0064700 Rhododendron simsii HOM05D004740 ORTHO05D005991 2.7e-150 535.8 386 75.9
Sopen01g002970 Solanum pennellii HOM05D004740 ORTHO05D005991 2.7e-150 535.8 365 78.6
Eucgr.J01859 Eucalyptus grandis HOM05D004740 ORTHO05D005991 3.6e-150 535.4 369 78.0
PGSC0003DMG400021362 Solanum tuberosum HOM05D004740 ORTHO05D005991 4.7e-150 535.0 365 78.9
C03p19860 Brassica napus HOM05D004740 ORTHO05D005991 8.0e-150 534.3 336 86.3
Aqoxy2G00789 Aquilegia oxysepala HOM05D004740 ORTHO05D005991 2.3e-149 532.7 390 74.4
Medtr3g031380 Medicago truncatula HOM05D004740 ORTHO05D005991 2.3e-149 532.7 387 75.5
Hund29009 Selenicereus undatus HOM05D004740 ORTHO05D005991 3.0e-149 532.3 344 79.7
Hund29013 Selenicereus undatus HOM05D004740 ORTHO05D005991 3.0e-149 532.3 344 79.7
VMungo0540G0639 Vigna mungo HOM05D004740 ORTHO05D005991 4.0e-149 531.9 360 79.7
Migut.N00764 Erythranthe guttata HOM05D004740 ORTHO05D005991 1.2e-148 530.4 383 75.7
SalBow2G1640 Salvia bowleyana HOM05D004740 ORTHO05D005991 1.5e-148 530.0 404 71.8
MSTRG.17889 Avicennia marina HOM05D004740 ORTHO05D005991 2.0e-148 529.6 378 75.7
SGA_v2.0_scaffold146G36123 Striga asiatica HOM05D004740 ORTHO05D005991 2.0e-148 529.6 377 76.1
CAN.G911.42 Capsicum annuum HOM05D004740 ORTHO05D005991 4.4e-148 528.5 364 78.6
PSO339G6109 Papaver somniferum HOM05D004740 ORTHO05D005991 5.7e-148 528.1 378 75.1
PSO801G0690 Papaver somniferum HOM05D004740 ORTHO05D005991 5.7e-148 528.1 391 73.4
Sc12g0002010 Simmondsia chinensis HOM05D004740 ORTHO05D005991 7.5e-148 527.7 399 72.7
FAN11G1726 Fragaria x ananassa HOM05D004740 ORTHO05D005991 1.3e-147 526.9 410 71.7
FAN16G0900 Fragaria x ananassa HOM05D004740 ORTHO05D005991 1.3e-147 526.9 410 71.7
EL10Ac7g15913 Beta vulgaris HOM05D004740 ORTHO05D005991 1.7e-147 526.6 388 74.5
Nn2g13251 Nelumbo nucifera HOM05D004740 ORTHO05D005991 1.7e-147 526.6 370 76.8
ECA248G3413 Erigeron canadensis HOM05D004740 ORTHO05D005991 2.8e-147 525.8 389 72.2
FAN21G3316 Fragaria x ananassa HOM05D004740 ORTHO05D005991 6.3e-147 524.6 419 70.4
FAN21G3649 Fragaria x ananassa HOM05D004740 ORTHO05D005991 6.3e-147 524.6 419 70.4
TAR633G1387 Trochodendron aralioides HOM05D004740 ORTHO05D005991 6.3e-147 524.6 327 83.2
DCAR_018228 Daucus carota HOM05D004740 ORTHO05D005991 1.1e-146 523.9 382 73.3
CDE06G2756 Ceratophyllum demersum HOM05D004740 ORTHO05D005991 3.1e-146 522.3 399 71.2
FAN25G0671 Fragaria x ananassa HOM05D004740 ORTHO05D005991 4.1e-146 521.9 395 73.4
AUR62009675 Chenopodium quinoa HOM05D004740 ORTHO05D005991 2.7e-145 519.2 378 73.0
AUR62001878 Chenopodium quinoa HOM05D004740 ORTHO05D005991 3.5e-145 518.8 378 73.0
Os03g0297400 Oryza sativa ssp. japonica HOM05D004740 ORTHO05D005991 1.0e-144 517.3 369 75.9
HanXRQChr01g0012161 Helianthus annuus HOM05D004740 ORTHO05D005991 2.2e-144 516.2 375 74.7
Zm00001eb013760 Zea mays HOM05D004740 ORTHO05D005991 4.2e-143 511.9 380 73.4
HPP92_013770 Vanilla planifolia HOM05D004740 ORTHO05D005991 6.1e-142 508.1 364 75.3
unitig_60.g25555 Utricularia gibba HOM05D004740 ORTHO05D005991 2.3e-141 506.1 377 72.9
MBI05_g35601_MAGBIO Magnolia biondii HOM05D004740 ORTHO05D005991 3.4e-140 502.3 335 78.5
Cc01_g14810 Coffea canephora HOM05D004740 ORTHO05D005991 2.2e-139 499.6 297 86.5
TPR.G35611 Trifolium pratense HOM05D004740 ORTHO05D005991 2.2e-139 499.6 312 82.7
Lsat_1_v5_gn_5_174621 Lactuca sativa HOM05D004740 ORTHO05D005991 2.8e-139 499.2 412 67.5
SEGI_23058 Sequoiadendron giganteum HOM05D004740 ORTHO05D005991 2.8e-139 499.2 387 70.3
Mapoly0009s0078 Marchantia polymorpha HOM05D004740 ORTHO05D005991 1.8e-138 496.5 331 77.6
CiPaw.14G054500 Carya illinoinensis HOM05D004740 ORTHO05D005991 1.6e-137 493.4 297 84.5
Pp3c20_19160 Physcomitrium patens HOM05D004740 ORTHO05D005991 3.8e-136 488.8 367 72.2
ATR0594G208 Amborella trichopoda HOM05D004740 ORTHO05D005991 5.0e-136 488.4 297 83.8
Sed0003355 Sechium edule HOM05D004740 ORTHO05D005991 1.5e-132 476.9 333 76.3
AagrBONN_evm.TU.Sc2ySwM_228.2654 Anthoceros agrestis HOM05D004740 ORTHO05D005991 3.4e-132 475.7 332 73.5
Actinidia32613 Actinidia chinensis HOM05D004740 ORTHO05D005991 5.7e-132 474.9 376 69.9
SMO200G0259 Selaginella moellendorffii HOM05D004740 ORTHO05D005991 2.5e-127 459.5 326 72.7
Atru.chr3.4126 Acer truncatum HOM05D004740 ORTHO05D005991 3.6e-126 455.7 406 67.0
SHI19203 Sapria himalayana HOM05D004740 ORTHO05D005991 1.4e-122 443.7 415 61.2
arahy.Tifrunner.gnm1.ann1.R7F6LC Arachis hypogaea HOM05D004740 ORTHO05D005991 7.5e-116 421.4 272 83.5
Cpa.g.sc2.364 Carica papaya HOM05D004740 ORTHO05D005991 6.4e-115 418.3 246 89.0
Cre14.g621650 Chlamydomonas reinhardtii HOM05D004740 ORTHO05D005991 5.1e-112 408.7 319 67.4
Nn2g10995 Nelumbo nucifera HOM05D004740 ORTHO05D005991 1.6e-110 403.7 379 63.6
Potri.001G282600 Populus trichocarpa HOM05D004740 ORTHO05D005991 7.5e-108 394.8 346 67.6
CBR_g33923 Chara braunii HOM05D004740 ORTHO05D005991 1.1e-106 391.0 334 61.7
PRCOL_00005899 Prasinoderma coloniale HOM05D004740 ORTHO05D005991 1.1e-106 391.0 289 68.5
MCO01G413 Micromonas commoda HOM05D004740 ORTHO05D005991 2.5e-95 353.2 365 54.5
GSVIVG01024639001 Vitis vinifera HOM05D004740 ORTHO05D005991 7.1e-90 335.1 198 87.9
A03p16880 Brassica napus HOM05D004740 ORTHO05D005991 4.3e-87 325.9 198 88.9
BraA03t10976Z Brassica rapa HOM05D004740 ORTHO05D005991 4.3e-87 325.9 198 88.9
Oeu005355.3 Olea europaea HOM05D003290 ORTHO05D005991 3.9e-72 276.2 166 83.7
Actinidia23202 Actinidia chinensis HOM05D004740 ORTHO05D005991 2.1e-65 253.8 369 48.0
PRCOL_00000466 Prasinoderma coloniale HOM05D004740 ORTHO05D005991 3.0e-64 250.0 294 46.3
MCO04G051 Micromonas commoda HOM05D004740 ORTHO05D005991 1.4e-58 231.1 293 44.7
Cre02.g088250 Chlamydomonas reinhardtii HOM05D004740 ORTHO05D005991 4.3e-55 219.5 328 42.4
Actinidia02620 Actinidia chinensis HOM05D004740 ORTHO05D005991 6.9e-53 212.2 154 74.0
GSVIVG01024638001 Vitis vinifera HOM05D004740 ORTHO05D005991 1.2e-52 211.5 129 80.6
Nitab4.5_0006359g0020 Nicotiana tabacum HOM05D004740 ORTHO05D005991 3.0e-48 196.8 178 62.4
COL.COLO4_24546 Corchorus olitorius HOM05D004740 ORTHO05D008255 5.3e-45 186.0 227 55.5
Nitab4.5_0006126g0030 Nicotiana tabacum HOM05D004740 ORTHO05D005991 1.8e-37 161.0 213 49.3
Nitab4.5_0000644g0120 Nicotiana tabacum HOM05D004740 ORTHO05D005991 7.7e-36 155.6 149 58.4
Zm00001eb396720 Zea mays HOM05D004740 ORTHO05D444996 1.8e-29 134.4 80 85.0
Oeu025052.1 Olea europaea HOM05D004740 ORTHO05D005991 1.0e-27 128.6 126 58.7
HPP92_013838 Vanilla planifolia HOM05D004740 ORTHO05D005991 8.8e-24 115.5 109 60.6
MBI10_g37352_MAGBIO Magnolia biondii HOM05D004740 ORTHO05D241996 3.4e-15 87.0 75 62.7
Nitab4.5_0000644g0100 Nicotiana tabacum HOM05D004740 ORTHO05D284956 9.8e-15 85.5 48 89.6
VMungo0331G0938 Vigna mungo HOM05D000577 ORTHO05D001093 5.4e-13 79.7 62 69.4
HPP92_012003 Vanilla planifolia HOM05D004740 ORTHO05D429499 4.5e-12 76.6 90 48.9
Carub.0004s1136 Capsella rubella HOM05D004740 ORTHO05D005991 1.1e-10 72.0 42 78.6
COL.COLO4_37924 Corchorus olitorius HOM05D004740 ORTHO05D005991 9.5e-10 68.9 80 56.2
MBI15_g35007_MAGBIO Magnolia biondii HOM05D000363 ORTHO05D017376 5.2e-08 63.2 43 72.1


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