Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g08039 Brassica carinata HOM05D000152 ORTHO05D091252 4.3e-44 181.0 97 100.0
AT2G30220 Arabidopsis thaliana HOM05D000152 ORTHO05D001046 6.7e-13 77.4 59 69.5
AT2G30310 Arabidopsis thaliana HOM05D000152 ORTHO05D001046 8.7e-13 77.0 57 71.9
AL4G25170 Arabidopsis lyrata HOM05D000152 ORTHO05D001046 1.1e-12 76.6 55 72.7
Carub.0004s1138 Capsella rubella HOM05D000152 ORTHO05D001046 3.3e-12 75.1 55 72.7
Carub.0004s1146 Capsella rubella HOM05D000152 ORTHO05D001046 4.3e-12 74.7 55 70.9
Thhalv10017743m.g Eutrema salsugineum HOM05D000152 ORTHO05D001046 7.4e-12 73.9 55 70.9
A04p23080 Brassica napus HOM05D000152 ORTHO05D001046 1.3e-11 73.2 82 56.1
C04p59220 Brassica napus HOM05D000152 ORTHO05D001046 1.3e-11 73.2 82 56.1
BolC4t27432H Brassica oleracea HOM05D000152 ORTHO05D001046 1.3e-11 73.2 82 56.1
BraA04t17840Z Brassica rapa HOM05D000152 ORTHO05D001046 1.3e-11 73.2 82 56.1
CARHR123630 Cardamine hirsuta HOM05D000152 ORTHO05D001046 1.3e-11 73.2 55 70.9
Thhalv10017765m.g Eutrema salsugineum HOM05D000152 ORTHO05D001046 2.2e-11 72.4 51 72.5
BcaC02g08030 Brassica carinata HOM05D000152 ORTHO05D001046 2.8e-11 72.0 82 56.1
AL4G26790 Arabidopsis lyrata HOM05D000152 ORTHO05D001046 6.3e-11 70.9 55 67.3
AL4G25050 Arabidopsis lyrata HOM05D000152 ORTHO05D001046 8.2e-11 70.5 93 50.5
Carub.0004s1285 Capsella rubella HOM05D000152 ORTHO05D001046 1.4e-10 69.7 55 63.6
BcaC02g11260 Brassica carinata HOM05D000152 ORTHO05D001046 1.8e-10 69.3 65 60.0
A05p14100 Brassica napus HOM05D000152 ORTHO05D001046 1.8e-10 69.3 65 60.0
C04p18460 Brassica napus HOM05D000152 ORTHO05D001046 1.8e-10 69.3 65 60.0
BolC4t23394H Brassica oleracea HOM05D000152 ORTHO05D001046 1.8e-10 69.3 65 60.0
BraA05t20337Z Brassica rapa HOM05D000152 ORTHO05D001046 1.8e-10 69.3 65 60.0
AT2G31540 Arabidopsis thaliana HOM05D000152 ORTHO05D001046 4.1e-10 68.2 65 56.9
Carub.0004s0392 Capsella rubella HOM05D000152 ORTHO05D001046 4.1e-10 68.2 85 47.1
AT2G24560 Arabidopsis thaliana HOM05D000152 ORTHO05D001046 5.3e-10 67.8 55 67.3
AL4G15110 Arabidopsis lyrata HOM05D000152 ORTHO05D001046 6.9e-10 67.4 55 65.5
A03p17700 Brassica napus HOM05D000152 ORTHO05D001046 6.9e-10 67.4 65 55.4
C03p20790 Brassica napus HOM05D000152 ORTHO05D001046 9.0e-10 67.0 65 55.4
Carub.0002s0608 Capsella rubella HOM05D000152 ORTHO05D001046 1.2e-09 66.6 55 61.8
BraA03t11035Z Brassica rapa HOM05D000152 ORTHO05D001046 1.5e-09 66.2 65 53.8
CARHR125180 Cardamine hirsuta HOM05D000152 ORTHO05D001046 2.0e-09 65.9 65 56.9
Aa31LG5G6400 Aethionema arabicum HOM05D000152 ORTHO05D001046 2.6e-09 65.5 54 63.0
AL2G17780 Arabidopsis lyrata HOM05D000152 ORTHO05D001046 2.6e-09 65.5 55 60.0
BcaB02g10398 Brassica carinata HOM05D000152 ORTHO05D001046 2.6e-09 65.5 65 53.8
A04p24200 Brassica napus HOM05D000152 ORTHO05D001046 2.6e-09 65.5 81 48.1
BraA04t17940Z Brassica rapa HOM05D000152 ORTHO05D001046 2.6e-09 65.5 81 48.1
BolC4t27584H Brassica oleracea HOM05D000152 ORTHO05D001046 3.4e-09 65.1 81 46.9
CARHR006670 Cardamine hirsuta HOM05D000152 ORTHO05D001046 4.5e-09 64.7 53 62.3
AT1G58430 Arabidopsis thaliana HOM05D000152 ORTHO05D001046 7.6e-09 63.9 51 62.7
A10p05540 Brassica napus HOM05D000152 ORTHO05D001046 1.0e-08 63.5 57 56.1
BraA10t42815Z Brassica rapa HOM05D000152 ORTHO05D001046 1.0e-08 63.5 57 56.1
Sp4g13990 Schrenkiella parvula HOM05D000152 ORTHO05D001046 1.0e-08 63.5 85 45.9
Sp1g05700 Schrenkiella parvula HOM05D000152 ORTHO05D001046 1.3e-08 63.2 87 42.5
BcaC05g24665 Brassica carinata HOM05D000152 ORTHO05D001046 1.7e-08 62.8 57 52.6
C05p05090 Brassica napus HOM05D000152 ORTHO05D001046 1.7e-08 62.8 57 52.6
Thhalv10009433m.g Eutrema salsugineum HOM05D000152 ORTHO05D001046 1.7e-08 62.8 57 54.4
BcaB02g06772 Brassica carinata HOM05D000152 ORTHO05D001046 2.2e-08 62.4 62 50.0
CARHR283970 Cardamine hirsuta HOM05D000152 ORTHO05D001046 2.2e-08 62.4 55 56.4
BolC5t29280H Brassica oleracea HOM05D000152 ORTHO05D001046 3.8e-08 61.6 57 52.6
BcaC05g24663 Brassica carinata HOM05D000152 ORTHO05D001046 8.5e-08 60.5 57 52.6
BcaC05g24664 Brassica carinata HOM05D000152 ORTHO05D001046 8.5e-08 60.5 57 52.6
A10p05510 Brassica napus HOM05D000152 ORTHO05D001046 8.5e-08 60.5 57 52.6
C05p05080 Brassica napus HOM05D000152 ORTHO05D001046 8.5e-08 60.5 57 52.6
BolC5t29279H Brassica oleracea HOM05D000152 ORTHO05D001046 8.5e-08 60.5 57 52.6
BraA10t42814Z Brassica rapa HOM05D000152 ORTHO05D001046 8.5e-08 60.5 57 52.6
Aa31LG5G5390 Aethionema arabicum HOM05D000152 ORTHO05D001046 1.1e-07 60.1 55 56.4
Duzib084G1108 Durio zibethinus HOM05D000152 ORTHO05D001046 2.1e-06 55.8 83 39.8
MBI15_g15938_MAGBIO Magnolia biondii HOM05D000152 ORTHO05D001046 2.1e-06 55.8 58 48.3
AT2G31550 Arabidopsis thaliana HOM05D000152 ORTHO05D001046 2.7e-06 55.5 42 64.3
THA.LOC104826273 Tarenaya hassleriana HOM05D000152 ORTHO05D001046 2.7e-06 55.5 50 56.0
GSVIVG01024630001 Vitis vinifera HOM05D000152 ORTHO05D001046 3.6e-06 55.1 59 52.5
Sabra10G0138800 Salix brachista HOM05D000152 ORTHO05D001046 4.6e-06 54.7 56 50.0
Gohir.A03G063100 Gossypium hirsutum HOM05D000152 ORTHO05D001046 6.1e-06 54.3 48 62.5


User provided reference genes

Program Settings